data_JVR # _chem_comp.id JVR _chem_comp.name "4-[2-(cyclopropylamino)-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-yl]-7-methoxy-3,4-dihydroquinoxalin-2(1H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H21 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-02 _chem_comp.pdbx_modified_date 2023-04-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 351.402 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JVR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7TTE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JVR C10 C1 C 0 1 Y N N -6.228 -8.506 38.331 -1.081 -0.913 0.225 C10 JVR 1 JVR C01 C2 C 0 1 N N N -6.634 -9.476 40.994 -0.268 -3.433 -0.661 C01 JVR 2 JVR C02 C3 C 0 1 N N N -6.234 -8.010 40.784 0.662 -2.653 0.232 C02 JVR 3 JVR C03 C4 C 0 1 Y N N -7.330 -6.418 39.186 1.251 -0.239 0.120 C03 JVR 4 JVR C04 C5 C 0 1 Y N N -7.673 -4.169 39.706 1.821 1.980 -0.127 C04 JVR 5 JVR C05 C6 C 0 1 Y N N -9.105 -5.158 38.195 3.533 0.461 0.165 C05 JVR 6 JVR C06 C7 C 0 1 Y N N -8.442 -6.359 38.311 2.606 -0.556 0.241 C06 JVR 7 JVR C07 C8 C 0 1 N N N -9.100 -7.407 37.428 3.306 -1.878 0.454 C07 JVR 8 JVR C08 C9 C 0 1 N N N -10.497 -6.784 37.219 4.728 -1.508 0.931 C08 JVR 9 JVR C09 C10 C 0 1 N N N -10.266 -5.254 37.237 4.927 -0.104 0.320 C09 JVR 10 JVR C11 C11 C 0 1 Y N N -5.868 -8.087 37.035 -1.523 0.275 0.780 C11 JVR 11 JVR C12 C12 C 0 1 Y N N -5.565 -9.041 36.062 -2.877 0.559 0.808 C12 JVR 12 JVR C13 C13 C 0 1 Y N N -5.613 -10.415 36.385 -3.789 -0.344 0.283 C13 JVR 13 JVR C14 C14 C 0 1 N N N -4.571 -11.247 34.267 -5.502 1.183 0.905 C14 JVR 14 JVR C15 C15 C 0 1 Y N N -5.963 -10.840 37.659 -3.350 -1.536 -0.275 C15 JVR 15 JVR C16 C16 C 0 1 Y N N -6.272 -9.884 38.620 -1.995 -1.824 -0.308 C16 JVR 16 JVR N01 N1 N 0 1 N N N -6.569 -7.595 39.397 0.287 -1.232 0.191 N01 JVR 17 JVR N02 N2 N 0 1 Y N N -6.960 -5.316 39.867 0.900 1.031 -0.059 N02 JVR 18 JVR N03 N3 N 0 1 N N N -7.318 -3.007 40.405 1.424 3.293 -0.314 N03 JVR 19 JVR N04 N4 N 0 1 Y N N -8.738 -4.069 38.876 3.112 1.706 -0.020 N04 JVR 20 JVR N05 N5 N 0 1 N N N -6.631 -10.315 39.915 -1.531 -3.017 -0.873 N05 JVR 21 JVR O01 O1 O 0 1 N N N -6.960 -9.959 42.074 0.126 -4.448 -1.196 O01 JVR 22 JVR O02 O2 O 0 1 N N N -5.329 -11.419 35.479 -5.119 -0.061 0.316 O02 JVR 23 JVR H1 H1 H 0 1 N N N -5.152 -7.899 40.948 0.581 -3.022 1.254 H1 JVR 24 JVR H2 H2 H 0 1 N N N -6.780 -7.376 41.498 1.688 -2.771 -0.119 H2 JVR 25 JVR H3 H3 H 0 1 N N N -9.164 -8.380 37.936 2.791 -2.461 1.217 H3 JVR 26 JVR H4 H4 H 0 1 N N N -8.564 -7.526 36.475 3.353 -2.436 -0.481 H4 JVR 27 JVR H5 H5 H 0 1 N N N -11.177 -7.081 38.031 4.773 -1.467 2.020 H5 JVR 28 JVR H6 H6 H 0 1 N N N -10.919 -7.099 36.253 5.463 -2.210 0.538 H6 JVR 29 JVR H7 H7 H 0 1 N N N -10.001 -4.872 36.240 5.415 -0.180 -0.652 H7 JVR 30 JVR H8 H8 H 0 1 N N N -11.148 -4.715 37.614 5.516 0.521 0.992 H8 JVR 31 JVR H9 H9 H 0 1 N N N -5.827 -7.035 36.796 -0.813 0.978 1.189 H9 JVR 32 JVR H10 H10 H 0 1 N N N -5.294 -8.729 35.064 -3.224 1.485 1.241 H10 JVR 33 JVR H11 H11 H 0 1 N N N -4.500 -12.209 33.739 -6.587 1.284 0.867 H11 JVR 34 JVR H12 H12 H 0 1 N N N -5.073 -10.511 33.622 -5.171 1.211 1.943 H12 JVR 35 JVR H13 H13 H 0 1 N N N -3.561 -10.889 34.514 -5.041 2.003 0.355 H13 JVR 36 JVR H14 H14 H 0 1 N N N -5.995 -11.892 37.899 -4.062 -2.238 -0.683 H14 JVR 37 JVR H15 H15 H 0 1 N N N -8.043 -2.447 40.805 2.088 3.998 -0.365 H15 JVR 38 JVR H17 H17 H 0 1 N N N -6.893 -11.271 40.048 -2.126 -3.550 -1.423 H17 JVR 39 JVR C1 C17 C 0 1 N N N ? ? ? 0.000 3.617 -0.434 C1 JVR 40 JVR C2 C18 C 0 1 N N N ? ? ? -0.436 5.035 -0.057 C2 JVR 41 JVR C3 C19 C 0 1 N N N ? ? ? -0.409 4.607 -1.526 C3 JVR 42 JVR H16 H16 H 0 1 N N N ? ? ? -0.688 2.803 -0.209 H16 JVR 43 JVR H18 H18 H 0 1 N N N ? ? ? -1.411 5.152 0.415 H18 JVR 44 JVR H19 H19 H 0 1 N N N ? ? ? 0.337 5.726 0.280 H19 JVR 45 JVR H20 H20 H 0 1 N N N ? ? ? 0.381 5.018 -2.155 H20 JVR 46 JVR H21 H21 H 0 1 N N N ? ? ? -1.367 4.444 -2.020 H21 JVR 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JVR C14 O02 SING N N 1 JVR O02 C13 SING N N 2 JVR C12 C13 DOUB Y N 3 JVR C12 C11 SING Y N 4 JVR C13 C15 SING Y N 5 JVR C11 C10 DOUB Y N 6 JVR C08 C09 SING N N 7 JVR C08 C07 SING N N 8 JVR C09 C05 SING N N 9 JVR C07 C06 SING N N 10 JVR C15 C16 DOUB Y N 11 JVR C05 C06 DOUB Y N 12 JVR C05 N04 SING Y N 13 JVR C06 C03 SING Y N 14 JVR C10 C16 SING Y N 15 JVR C10 N01 SING N N 16 JVR C16 N05 SING N N 17 JVR N04 C04 DOUB Y N 18 JVR C03 N01 SING N N 19 JVR C03 N02 DOUB Y N 20 JVR N01 C02 SING N N 21 JVR C04 N02 SING Y N 22 JVR C04 N03 SING N N 23 JVR N05 C01 SING N N 24 JVR C02 C01 SING N N 25 JVR C01 O01 DOUB N N 26 JVR C02 H1 SING N N 27 JVR C02 H2 SING N N 28 JVR C07 H3 SING N N 29 JVR C07 H4 SING N N 30 JVR C08 H5 SING N N 31 JVR C08 H6 SING N N 32 JVR C09 H7 SING N N 33 JVR C09 H8 SING N N 34 JVR C11 H9 SING N N 35 JVR C12 H10 SING N N 36 JVR C14 H11 SING N N 37 JVR C14 H12 SING N N 38 JVR C14 H13 SING N N 39 JVR C15 H14 SING N N 40 JVR N03 H15 SING N N 41 JVR N05 H17 SING N N 42 JVR N03 C1 SING N N 43 JVR C1 C2 SING N N 44 JVR C2 C3 SING N N 45 JVR C3 C1 SING N N 46 JVR C1 H16 SING N N 47 JVR C2 H18 SING N N 48 JVR C2 H19 SING N N 49 JVR C3 H20 SING N N 50 JVR C3 H21 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JVR SMILES ACDLabs 12.01 "COc1ccc2c(NC(=O)CN2c2nc(NC3CC3)nc3CCCc32)c1" JVR InChI InChI 1.03 "InChI=1S/C19H21N5O2/c1-26-12-7-8-16-15(9-12)21-17(25)10-24(16)18-13-3-2-4-14(13)22-19(23-18)20-11-5-6-11/h7-9,11H,2-6,10H2,1H3,(H,21,25)(H,20,22,23)" JVR InChIKey InChI 1.03 PQVFTRMKRDTVIW-UHFFFAOYSA-N JVR SMILES_CANONICAL CACTVS 3.385 "COc1ccc2N(CC(=O)Nc2c1)c3nc(NC4CC4)nc5CCCc35" JVR SMILES CACTVS 3.385 "COc1ccc2N(CC(=O)Nc2c1)c3nc(NC4CC4)nc5CCCc35" JVR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(c1)NC(=O)CN2c3c4c(nc(n3)NC5CC5)CCC4" JVR SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc2c(c1)NC(=O)CN2c3c4c(nc(n3)NC5CC5)CCC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JVR "SYSTEMATIC NAME" ACDLabs 12.01 "4-[2-(cyclopropylamino)-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-yl]-7-methoxy-3,4-dihydroquinoxalin-2(1H)-one" JVR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[2-(cyclopropylamino)-6,7-dihydro-5~{H}-cyclopenta[d]pyrimidin-4-yl]-7-methoxy-1,3-dihydroquinoxalin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JVR "Create component" 2022-02-02 RCSB JVR "Initial release" 2023-04-12 RCSB #