data_JX6 # _chem_comp.id JX6 _chem_comp.name "N~2~-[(benzyloxy)carbonyl]-N-{(2R)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-4-methyl-L-leucinamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H33 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-09 _chem_comp.pdbx_modified_date 2024-08-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 419.515 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JX6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8TQH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JX6 C1 C1 C 0 1 N N N N N N -10.529 -18.837 -18.758 4.642 0.814 -1.138 C1 JX6 1 JX6 C10 C2 C 0 1 N N N N N N -6.012 -12.222 -19.130 -0.882 -2.796 0.582 C10 JX6 2 JX6 C11 C3 C 0 1 N N N N N N -6.123 -14.620 -18.550 1.565 -2.317 0.420 C11 JX6 3 JX6 C12 C4 C 0 1 N N N N N N -9.773 -16.505 -18.268 2.322 0.351 -0.822 C12 JX6 4 JX6 C13 C5 C 0 1 N N N N N N -6.555 -12.904 -16.808 0.518 -3.999 -1.102 C13 JX6 5 JX6 C14 C6 C 0 1 N N S N N N -9.124 -14.216 -17.953 -0.044 -0.216 -0.684 C14 JX6 6 JX6 C15 C7 C 0 1 N N N N N N -10.529 -13.680 -17.990 -1.117 -0.258 0.373 C15 JX6 7 JX6 C17 C8 C 0 1 N N S N N N -12.397 -12.643 -16.848 -3.445 -0.507 1.049 C17 JX6 8 JX6 C19 C9 C 0 1 N N N N N N -13.235 -13.409 -15.809 -4.797 -0.174 0.417 C19 JX6 9 JX6 C2 C10 C 0 1 Y N N N N N -11.968 -18.701 -19.218 5.904 0.960 -0.329 C2 JX6 10 JX6 C20 C11 C 0 1 N N S N N N -13.412 -14.847 -16.295 -4.761 1.250 -0.144 C20 JX6 11 JX6 C21 C12 C 0 1 N N N N N N -14.301 -14.945 -17.531 -4.581 2.276 0.999 C21 JX6 12 JX6 C22 C13 C 0 1 N N N N N N -15.067 -16.256 -17.332 -5.460 3.449 0.510 C22 JX6 13 JX6 C24 C14 C 0 1 N N N N N N -14.104 -15.739 -15.304 -6.093 1.609 -0.763 C24 JX6 14 JX6 C3 C15 C 0 1 Y N N N N N -12.891 -19.697 -18.898 6.264 2.196 0.174 C3 JX6 15 JX6 C34 C16 C 0 1 N N N N N N -8.220 -13.207 -18.661 0.023 -1.568 -1.397 C34 JX6 16 JX6 C4 C17 C 0 1 Y N N N N N -14.211 -19.579 -19.325 7.423 2.330 0.916 C4 JX6 17 JX6 C5 C18 C 0 1 Y N N N N N -14.605 -18.465 -20.058 8.221 1.228 1.156 C5 JX6 18 JX6 C6 C19 C 0 1 Y N N N N N -13.685 -17.475 -20.392 7.861 -0.009 0.653 C6 JX6 19 JX6 C7 C20 C 0 1 Y N N N N N -12.367 -17.596 -19.966 6.700 -0.144 -0.084 C7 JX6 20 JX6 C8 C21 C 0 1 N N N N N N -12.348 -11.150 -16.523 -3.501 -1.907 1.664 C8 JX6 21 JX6 C9 C22 C 0 1 N N N N N N -6.739 -13.258 -18.283 0.306 -2.670 -0.374 C9 JX6 22 JX6 N13 N1 N 0 1 N N N N N N -9.099 -15.448 -18.715 1.249 0.070 -0.057 N13 JX6 23 JX6 N16 N2 N 0 1 N N N N N N -11.035 -13.157 -16.878 -2.401 -0.467 0.022 N16 JX6 24 JX6 N23 N3 N 0 1 N N N N N N -14.969 -16.548 -15.914 -6.464 2.844 -0.373 N23 JX6 25 JX6 O11 O1 O 0 1 N N N N N N -9.766 -17.679 -19.110 3.531 0.513 -0.253 O11 JX6 26 JX6 O26 O2 O 0 1 N N N N N N -13.872 -15.716 -14.119 -6.736 0.891 -1.500 O26 JX6 27 JX6 O33 O3 O 0 1 N N N N N N -10.372 -16.524 -17.198 2.198 0.458 -2.026 O33 JX6 28 JX6 O38 O4 O 0 1 N N N N N N -11.169 -13.745 -19.033 -0.825 -0.103 1.540 O38 JX6 29 JX6 O9 O5 O 0 1 N N N N N N -13.659 -10.567 -16.700 -3.912 -2.848 0.670 O9 JX6 30 JX6 H1 H1 H 0 1 N N N N N N -10.081 -19.721 -19.235 4.441 1.745 -1.669 H1 JX6 31 JX6 H11 H2 H 0 1 N N N N N N -10.511 -18.961 -17.665 4.763 0.004 -1.857 H11 JX6 32 JX6 H103 H3 H 0 0 N N N N N N -4.940 -12.232 -18.883 -0.859 -1.976 1.299 H103 JX6 33 JX6 H102 H4 H 0 0 N N N N N N -6.144 -12.461 -20.195 -1.811 -2.757 0.014 H102 JX6 34 JX6 H101 H5 H 0 0 N N N N N N -6.426 -11.224 -18.924 -0.821 -3.746 1.114 H101 JX6 35 JX6 H113 H6 H 0 0 N N N N N N -5.061 -14.605 -18.263 1.956 -3.215 0.900 H113 JX6 36 JX6 H112 H7 H 0 0 N N N N N N -6.652 -15.383 -17.960 2.318 -1.909 -0.254 H112 JX6 37 JX6 H111 H8 H 0 0 N N N N N N -6.210 -14.858 -19.620 1.319 -1.577 1.182 H111 JX6 38 JX6 H13 H9 H 0 1 N N N N N N -5.486 -12.945 -16.551 -0.379 -4.250 -1.668 H13 JX6 39 JX6 H131 H10 H 0 0 N N N N N N -6.938 -11.889 -16.624 1.364 -3.909 -1.783 H131 JX6 40 JX6 H132 H11 H 0 0 N N N N N N -7.109 -13.623 -16.187 0.720 -4.784 -0.373 H132 JX6 41 JX6 H14 H12 H 0 1 N N N N N N -8.791 -14.372 -16.916 -0.277 0.565 -1.408 H14 JX6 42 JX6 H10 H13 H 0 1 N N N N N N -12.862 -12.773 -17.836 -3.217 0.222 1.827 H10 JX6 43 JX6 H19 H14 H 0 1 N N N N N N -14.219 -12.930 -15.700 -5.004 -0.876 -0.391 H19 JX6 44 JX6 H191 H15 H 0 0 N N N N N N -12.716 -13.406 -14.839 -5.580 -0.247 1.172 H191 JX6 45 JX6 H20 H16 H 0 1 N N N N N N -12.423 -15.267 -16.532 -3.960 1.350 -0.876 H20 JX6 46 JX6 H21 H17 H 0 1 N N N N N N -13.694 -14.982 -18.448 -4.951 1.878 1.943 H21 JX6 47 JX6 H211 H18 H 0 0 N N N N N N -14.993 -14.092 -17.584 -3.538 2.581 1.089 H211 JX6 48 JX6 H221 H19 H 0 0 N N N N N N -14.610 -17.063 -17.924 -5.945 3.934 1.357 H221 JX6 49 JX6 H22 H20 H 0 1 N N N N N N -16.119 -16.136 -17.628 -4.856 4.169 -0.041 H22 JX6 50 JX6 H3 H21 H 0 1 N N N N N N -12.583 -20.556 -18.321 5.640 3.058 -0.013 H3 JX6 51 JX6 H34 H22 H 0 1 N N N N N N -8.298 -13.386 -19.744 -0.929 -1.766 -1.890 H34 JX6 52 JX6 H341 H23 H 0 0 N N N N N N -8.593 -12.199 -18.428 0.820 -1.548 -2.140 H341 JX6 53 JX6 H4 H24 H 0 1 N N N N N N -14.928 -20.351 -19.087 7.704 3.296 1.309 H4 JX6 54 JX6 H5 H25 H 0 1 N N N N N N -15.634 -18.367 -20.371 9.127 1.332 1.736 H5 JX6 55 JX6 H6 H26 H 0 1 N N N N N N -13.992 -16.621 -20.977 8.486 -0.870 0.840 H6 JX6 56 JX6 H7 H27 H 0 1 N N N N N N -11.649 -16.829 -20.216 6.417 -1.111 -0.473 H7 JX6 57 JX6 H81 H28 H 0 1 N N N N N N -12.025 -11.014 -15.480 -2.513 -2.181 2.036 H81 JX6 58 JX6 H8 H29 H 0 1 N N N N N N -11.634 -10.653 -17.196 -4.214 -1.914 2.488 H8 JX6 59 JX6 HN13 H30 H 0 0 N N N N N N -8.581 -15.504 -19.568 1.332 0.056 0.910 HN13 JX6 60 JX6 HN16 H31 H 0 0 N N N N N N -10.473 -13.116 -16.052 -2.635 -0.591 -0.912 HN16 JX6 61 JX6 HN23 H32 H 0 0 N N N N N N -15.487 -17.268 -15.452 -7.288 3.279 -0.643 HN23 JX6 62 JX6 HO9 H33 H 0 1 N N N N N N -13.624 -9.640 -16.497 -3.970 -3.759 0.990 HO9 JX6 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JX6 O26 C24 DOUB N N 1 JX6 C24 N23 SING N N 2 JX6 C24 C20 SING N N 3 JX6 N23 C22 SING N N 4 JX6 C22 C21 SING N N 5 JX6 C21 C20 SING N N 6 JX6 C20 C19 SING N N 7 JX6 C19 C17 SING N N 8 JX6 C8 C17 SING N N 9 JX6 C17 N16 SING N N 10 JX6 O9 C8 SING N N 11 JX6 N16 C15 SING N N 12 JX6 O38 C15 DOUB N N 13 JX6 C15 C14 SING N N 14 JX6 C34 C14 SING N N 15 JX6 C14 N13 SING N N 16 JX6 C9 C34 SING N N 17 JX6 N13 C12 SING N N 18 JX6 C12 O33 DOUB N N 19 JX6 O11 C12 SING N N 20 JX6 C1 O11 SING N N 21 JX6 C2 C1 SING N N 22 JX6 C2 C7 DOUB Y N 23 JX6 C3 C2 SING Y N 24 JX6 C7 C6 SING Y N 25 JX6 C6 C5 DOUB Y N 26 JX6 C5 C4 SING Y N 27 JX6 C4 C3 DOUB Y N 28 JX6 C10 C9 SING N N 29 JX6 C11 C9 SING N N 30 JX6 C13 C9 SING N N 31 JX6 C1 H1 SING N N 32 JX6 C1 H11 SING N N 33 JX6 C10 H103 SING N N 34 JX6 C10 H102 SING N N 35 JX6 C10 H101 SING N N 36 JX6 C11 H113 SING N N 37 JX6 C11 H112 SING N N 38 JX6 C11 H111 SING N N 39 JX6 C13 H13 SING N N 40 JX6 C13 H131 SING N N 41 JX6 C13 H132 SING N N 42 JX6 C14 H14 SING N N 43 JX6 C17 H10 SING N N 44 JX6 C19 H19 SING N N 45 JX6 C19 H191 SING N N 46 JX6 C20 H20 SING N N 47 JX6 C21 H21 SING N N 48 JX6 C21 H211 SING N N 49 JX6 C22 H221 SING N N 50 JX6 C22 H22 SING N N 51 JX6 C3 H3 SING N N 52 JX6 C34 H34 SING N N 53 JX6 C34 H341 SING N N 54 JX6 C4 H4 SING N N 55 JX6 C5 H5 SING N N 56 JX6 C6 H6 SING N N 57 JX6 C7 H7 SING N N 58 JX6 C8 H81 SING N N 59 JX6 C8 H8 SING N N 60 JX6 N13 HN13 SING N N 61 JX6 N16 HN16 SING N N 62 JX6 N23 HN23 SING N N 63 JX6 O9 HO9 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JX6 SMILES ACDLabs 12.01 "CC(C)(C)CC(NC(=O)OCc1ccccc1)C(=O)NC(CC1CCNC1=O)CO" JX6 InChI InChI 1.06 "InChI=1S/C22H33N3O5/c1-22(2,3)12-18(25-21(29)30-14-15-7-5-4-6-8-15)20(28)24-17(13-26)11-16-9-10-23-19(16)27/h4-8,16-18,26H,9-14H2,1-3H3,(H,23,27)(H,24,28)(H,25,29)/t16-,17+,18-/m0/s1" JX6 InChIKey InChI 1.06 GVWXWUJUDUDFRS-KSZLIROESA-N JX6 SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)C[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@H](CO)C[C@@H]2CCNC2=O" JX6 SMILES CACTVS 3.385 "CC(C)(C)C[CH](NC(=O)OCc1ccccc1)C(=O)N[CH](CO)C[CH]2CCNC2=O" JX6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)CO)NC(=O)OCc2ccccc2" JX6 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C)CC(C(=O)NC(CC1CCNC1=O)CO)NC(=O)OCc2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier JX6 "SYSTEMATIC NAME" ACDLabs 12.01 "N~2~-[(benzyloxy)carbonyl]-N-{(2R)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-4-methyl-L-leucinamide" JX6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[(2~{S})-4,4-dimethyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]pentan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JX6 "Create component" 2023-08-09 RCSB JX6 "Initial release" 2024-08-14 RCSB #