data_JY6 # _chem_comp.id JY6 _chem_comp.name "(3~{Z})-3-(3-oxidanylidene-1~{H}-indol-2-ylidene)-1~{H}-indol-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H10 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms indirubin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-16 _chem_comp.pdbx_modified_date 2022-11-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 262.263 _chem_comp.one_letter_code ? _chem_comp.three_letter_code JY6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ZUB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal JY6 N1 N1 N 0 1 N N N 161.711 164.058 163.062 2.878 -1.832 -0.067 N1 JY6 1 JY6 C7 C1 C 0 1 N N N 161.011 164.606 159.534 -0.438 -0.382 -0.004 C7 JY6 2 JY6 C8 C2 C 0 1 N N N 160.175 164.206 158.512 -1.049 0.963 -0.123 C8 JY6 3 JY6 C9 C3 C 0 1 Y N N 160.531 164.895 157.313 -2.504 0.734 -0.055 C9 JY6 4 JY6 O1 O1 O 0 1 N N N 162.760 165.650 161.813 0.965 -3.074 -0.143 O1 JY6 5 JY6 C1 C4 C 0 1 Y N N 159.207 161.323 163.314 4.497 1.542 0.102 C1 JY6 6 JY6 C5 C5 C 0 1 Y N N 159.313 162.289 161.107 2.105 1.673 0.110 C5 JY6 7 JY6 C6 C6 C 0 1 N N N 161.083 164.231 160.902 0.911 -0.672 -0.015 C6 JY6 8 JY6 C4 C7 C 0 1 Y N N 160.302 163.172 161.535 2.036 0.283 0.038 C4 JY6 9 JY6 C3 C8 C 0 1 Y N N 160.728 163.104 162.874 3.211 -0.483 0.001 C3 JY6 10 JY6 C2 C9 C 0 1 Y N N 160.189 162.188 163.768 4.440 0.163 0.034 C2 JY6 11 JY6 N N2 N 0 1 N N N 161.881 165.542 159.008 -1.465 -1.288 0.128 N JY6 12 JY6 C C10 C 0 1 Y N N 158.775 161.373 161.997 3.336 2.296 0.139 C JY6 13 JY6 O O2 O 0 1 N N N 159.233 163.383 158.586 -0.473 2.027 -0.250 O JY6 14 JY6 C10 C11 C 0 1 Y N N 160.085 164.905 155.994 -3.602 1.593 -0.115 C10 JY6 15 JY6 C11 C12 C 0 1 Y N N 160.707 165.721 155.062 -4.878 1.079 -0.028 C11 JY6 16 JY6 C12 C13 C 0 1 Y N N 161.770 166.533 155.427 -5.070 -0.285 0.119 C12 JY6 17 JY6 C13 C14 C 0 1 Y N N 162.233 166.547 156.733 -3.992 -1.145 0.179 C13 JY6 18 JY6 C14 C15 C 0 1 Y N N 161.609 165.727 157.663 -2.696 -0.648 0.094 C14 JY6 19 JY6 C15 C16 C 0 1 N N N 161.919 164.733 161.880 1.545 -2.008 -0.084 C15 JY6 20 JY6 H9 H1 H 0 1 N N N 162.194 164.230 163.920 3.525 -2.554 -0.103 H9 JY6 21 JY6 H1 H2 H 0 1 N N N 158.774 160.603 163.992 5.457 2.036 0.127 H1 JY6 22 JY6 H3 H3 H 0 1 N N N 158.967 162.318 160.084 1.199 2.260 0.138 H3 JY6 23 JY6 H2 H4 H 0 1 N N N 160.527 162.151 164.793 5.353 -0.413 0.006 H2 JY6 24 JY6 H8 H5 H 0 1 N N N 162.598 166.014 159.521 -1.345 -2.246 0.227 H8 JY6 25 JY6 H H6 H 0 1 N N N 158.010 160.689 161.661 3.394 3.373 0.195 H JY6 26 JY6 H4 H7 H 0 1 N N N 159.257 164.279 155.698 -3.453 2.657 -0.229 H4 JY6 27 JY6 H5 H8 H 0 1 N N N 160.360 165.724 154.039 -5.731 1.741 -0.075 H5 JY6 28 JY6 H6 H9 H 0 1 N N N 162.242 167.161 154.686 -6.073 -0.680 0.187 H6 JY6 29 JY6 H7 H10 H 0 1 N N N 163.059 167.180 157.020 -4.156 -2.207 0.294 H7 JY6 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal JY6 C11 C12 DOUB Y N 1 JY6 C11 C10 SING Y N 2 JY6 C12 C13 SING Y N 3 JY6 C10 C9 DOUB Y N 4 JY6 C13 C14 DOUB Y N 5 JY6 C9 C14 SING Y N 6 JY6 C9 C8 SING N N 7 JY6 C14 N SING N N 8 JY6 C8 O DOUB N N 9 JY6 C8 C7 SING N N 10 JY6 N C7 SING N N 11 JY6 C7 C6 DOUB N Z 12 JY6 C6 C4 SING N N 13 JY6 C6 C15 SING N N 14 JY6 C5 C4 DOUB Y N 15 JY6 C5 C SING Y N 16 JY6 C4 C3 SING Y N 17 JY6 O1 C15 DOUB N N 18 JY6 C15 N1 SING N N 19 JY6 C C1 DOUB Y N 20 JY6 C3 N1 SING N N 21 JY6 C3 C2 DOUB Y N 22 JY6 C1 C2 SING Y N 23 JY6 N1 H9 SING N N 24 JY6 C1 H1 SING N N 25 JY6 C5 H3 SING N N 26 JY6 C2 H2 SING N N 27 JY6 N H8 SING N N 28 JY6 C H SING N N 29 JY6 C10 H4 SING N N 30 JY6 C11 H5 SING N N 31 JY6 C12 H6 SING N N 32 JY6 C13 H7 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor JY6 InChI InChI 1.06 "InChI=1S/C16H10N2O2/c19-15-10-6-2-4-8-12(10)17-14(15)13-9-5-1-3-7-11(9)18-16(13)20/h1-8,17H,(H,18,20)/b14-13-" JY6 InChIKey InChI 1.06 CRDNMYFJWFXOCH-YPKPFQOOSA-N JY6 SMILES_CANONICAL CACTVS 3.385 O=C1Nc2ccccc2\C1=C/3Nc4ccccc4C/3=O JY6 SMILES CACTVS 3.385 O=C1Nc2ccccc2C1=C3Nc4ccccc4C3=O JY6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)/C(=C/3\C(=O)c4ccccc4N3)/C(=O)N2" JY6 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(=C3C(=O)c4ccccc4N3)C(=O)N2" # _pdbx_chem_comp_identifier.comp_id JY6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{Z})-3-(3-oxidanylidene-1~{H}-indol-2-ylidene)-1~{H}-indol-2-one" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id JY6 _pdbx_chem_comp_synonyms.name indirubin _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site JY6 "Create component" 2022-05-16 PDBE JY6 "Modify descriptor" 2022-08-22 RCSB JY6 "Initial release" 2022-11-23 RCSB #