data_K2W # _chem_comp.id K2W _chem_comp.name "(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[[4-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]but-3-ynylamino]methyl]oxolane-3,4-diol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H29 N11 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-04-16 _chem_comp.pdbx_modified_date 2020-02-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 583.557 _chem_comp.one_letter_code ? _chem_comp.three_letter_code K2W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6RGD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal K2W C2 C1 C 0 1 N N S 15.391 9.944 8.227 -4.614 2.598 -1.638 C2 K2W 1 K2W C3 C2 C 0 1 N N R 15.229 9.471 9.629 -3.647 1.400 -1.707 C3 K2W 2 K2W C4 C3 C 0 1 N N R 16.862 8.171 8.828 -5.614 0.566 -0.814 C4 K2W 3 K2W C5 C4 C 0 1 Y N N 16.034 6.241 7.472 -5.519 -0.387 1.520 C5 K2W 4 K2W C6 C5 C 0 1 Y N N 17.761 4.977 7.553 -7.560 -1.061 1.807 C6 K2W 5 K2W C7 C6 C 0 1 Y N N 18.678 4.030 7.452 -8.798 -1.572 2.233 C7 K2W 6 K2W N8 N1 N 0 1 Y N N 22.825 12.804 11.903 8.477 2.642 1.832 N8 K2W 7 K2W N9 N2 N 0 1 Y N N 22.157 10.839 12.954 8.128 0.535 0.945 N9 K2W 8 K2W C10 C7 C 0 1 N N N 13.749 9.371 9.980 -2.265 1.818 -1.200 C10 K2W 9 K2W C11 C8 C 0 1 N N N 14.374 9.293 12.338 0.020 1.072 -0.904 C11 K2W 10 K2W C12 C9 C 0 1 N N N 14.833 10.410 13.270 0.973 -0.106 -1.108 C12 K2W 11 K2W C14 C10 C 0 1 N N N 17.407 10.992 12.921 3.387 0.552 -0.248 C14 K2W 12 K2W C16 C11 C 0 1 Y N N 20.535 12.307 12.193 6.332 2.058 1.067 C16 K2W 13 K2W C18 C12 C 0 1 Y N N 23.156 11.684 12.498 8.912 1.443 1.488 C18 K2W 14 K2W C19 C13 C 0 1 Y N N 20.874 11.170 12.790 6.845 0.795 0.719 C19 K2W 15 K2W C20 C14 C 0 1 N N R 19.788 9.259 13.822 5.842 -1.284 -0.322 C20 K2W 16 K2W C21 C15 C 0 1 N N R 18.640 9.144 14.764 5.172 -2.260 0.678 C21 K2W 17 K2W C1 C16 C 0 1 N N R 16.682 9.278 7.823 -5.761 2.106 -0.721 C1 K2W 18 K2W C13 C17 C 0 1 N N N 16.258 10.730 13.073 2.316 0.260 -0.630 C13 K2W 19 K2W C15 C18 C 0 1 Y N N 18.755 11.294 12.746 4.694 0.908 0.217 C15 K2W 20 K2W C17 C19 C 0 1 Y N N 21.484 13.119 11.752 7.210 2.994 1.644 C17 K2W 21 K2W C22 C20 C 0 1 N N S 18.671 7.679 14.984 4.755 -3.432 -0.242 C22 K2W 22 K2W C23 C21 C 0 1 N N R 18.869 7.162 13.581 4.720 -2.812 -1.652 C23 K2W 23 K2W C24 C22 C 0 1 N N N 17.518 7.001 12.892 3.324 -2.974 -2.258 C24 K2W 24 K2W C8 C23 C 0 1 Y N N 20.183 5.260 8.729 -9.712 -0.954 0.206 C8 K2W 25 K2W C9 C24 C 0 1 Y N N 18.030 6.080 8.236 -7.483 -0.494 0.523 C9 K2W 26 K2W N1 N3 N 0 1 Y N N 16.965 6.861 8.183 -6.183 -0.082 0.369 N1 K2W 27 K2W N10 N4 N 0 1 Y N N 19.766 10.541 13.135 5.795 0.089 0.186 N10 K2W 28 K2W N11 N5 N 0 1 N N N 21.085 14.234 11.163 6.764 4.252 2.008 N11 K2W 29 K2W N2 N6 N 0 1 Y N N 16.527 5.076 7.081 -6.329 -0.961 2.362 N2 K2W 30 K2W N3 N7 N 0 1 N N N 18.351 2.952 6.756 -8.935 -2.142 3.486 N3 K2W 31 K2W N4 N8 N 0 1 Y N N 19.919 4.169 8.053 -9.834 -1.495 1.404 N4 K2W 32 K2W N5 N9 N 0 1 Y N N 19.214 6.246 8.827 -8.574 -0.461 -0.235 N5 K2W 33 K2W N6 N10 N 0 1 N N N 13.454 9.843 11.337 -1.321 0.707 -1.381 N6 K2W 34 K2W N7 N11 N 0 1 Y N N 19.212 12.386 12.165 5.021 2.067 0.739 N7 K2W 35 K2W O1 O1 O 0 1 N N N 17.739 10.197 7.990 -7.031 2.529 -1.222 O1 K2W 36 K2W O2 O2 O 0 1 N N N 15.656 8.134 9.553 -4.185 0.367 -0.866 O2 K2W 37 K2W O3 O3 O 0 1 N N N 18.968 9.809 15.983 6.105 -2.696 1.669 O3 K2W 38 K2W O4 O4 O 0 1 N N N 19.824 7.368 15.755 5.721 -4.484 -0.182 O4 K2W 39 K2W O5 O5 O 0 1 N N N 16.568 6.460 13.802 3.332 -2.501 -3.606 O5 K2W 40 K2W O6 O6 O 0 1 N N N 19.573 8.201 12.887 5.037 -1.417 -1.513 O6 K2W 41 K2W O7 O7 O 0 1 N N N 15.558 11.360 8.227 -5.112 2.915 -2.939 O7 K2W 42 K2W H1 H1 H 0 1 N N N 14.556 9.617 7.590 -4.119 3.464 -1.198 H1 K2W 43 K2W H2 H2 H 0 1 N N N 15.788 10.083 10.352 -3.572 1.043 -2.734 H2 K2W 44 K2W H3 H3 H 0 1 N N N 17.730 8.369 9.474 -6.087 0.190 -1.722 H3 K2W 45 K2W H4 H4 H 0 1 N N N 15.047 6.619 7.251 -4.474 -0.185 1.704 H4 K2W 46 K2W H5 H5 H 0 1 N N N 13.176 9.979 9.264 -1.918 2.685 -1.762 H5 K2W 47 K2W H6 H6 H 0 1 N N N 13.439 8.319 9.899 -2.328 2.072 -0.142 H6 K2W 48 K2W H7 H7 H 0 1 N N N 13.859 8.516 12.922 -0.028 1.322 0.157 H7 K2W 49 K2W H8 H8 H 0 1 N N N 15.247 8.854 11.833 0.382 1.934 -1.464 H8 K2W 50 K2W H9 H9 H 0 1 N N N 14.234 11.311 13.070 0.610 -0.969 -0.548 H9 K2W 51 K2W H10 H10 H 0 1 N N N 14.679 10.091 14.312 1.020 -0.356 -2.168 H10 K2W 52 K2W H11 H11 H 0 1 N N N 24.195 11.423 12.631 9.950 1.198 1.658 H11 K2W 53 K2W H12 H12 H 0 1 N N N 20.737 9.124 14.362 6.872 -1.584 -0.519 H12 K2W 54 K2W H13 H13 H 0 1 N N N 17.694 9.485 14.318 4.299 -1.801 1.143 H13 K2W 55 K2W H14 H14 H 0 1 N N N 16.621 8.881 6.799 -5.615 2.450 0.303 H14 K2W 56 K2W H15 H15 H 0 1 N N N 17.737 7.305 15.430 3.769 -3.805 0.037 H15 K2W 57 K2W H16 H16 H 0 1 N N N 19.424 6.212 13.583 5.459 -3.298 -2.289 H16 K2W 58 K2W H17 H17 H 0 1 N N N 17.168 7.984 12.542 3.042 -4.027 -2.243 H17 K2W 59 K2W H18 H18 H 0 1 N N N 17.626 6.323 12.033 2.606 -2.397 -1.675 H18 K2W 60 K2W H19 H19 H 0 1 N N N 21.144 5.389 9.204 -10.580 -0.912 -0.436 H19 K2W 61 K2W H20 H20 H 0 1 N N N 21.883 14.762 10.872 7.378 4.889 2.405 H20 K2W 62 K2W H21 H21 H 0 1 N N N 20.526 14.008 10.365 5.836 4.498 1.866 H21 K2W 63 K2W H22 H22 H 0 1 N N N 19.119 2.311 6.753 -8.171 -2.192 4.082 H22 K2W 64 K2W H23 H23 H 0 1 N N N 17.554 2.515 7.173 -9.794 -2.492 3.769 H23 K2W 65 K2W H24 H24 H 0 1 N N N 13.524 10.840 11.351 -1.653 -0.128 -0.923 H24 K2W 66 K2W H26 H26 H 0 1 N N N 18.558 9.787 7.738 -7.136 3.489 -1.268 H26 K2W 67 K2W H27 H27 H 0 1 N N N 18.239 9.739 16.588 5.732 -3.308 2.318 H27 K2W 68 K2W H28 H28 H 0 1 N N N 19.709 7.690 16.641 5.510 -5.245 -0.740 H28 K2W 69 K2W H29 H29 H 0 1 N N N 15.730 6.363 13.365 2.478 -2.574 -4.054 H29 K2W 70 K2W H30 H30 H 0 1 N N N 14.743 11.775 8.482 -5.726 3.662 -2.954 H30 K2W 71 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal K2W N3 C7 SING N N 1 K2W N2 C5 DOUB Y N 2 K2W N2 C6 SING Y N 3 K2W C7 C6 DOUB Y N 4 K2W C7 N4 SING Y N 5 K2W C5 N1 SING Y N 6 K2W C6 C9 SING Y N 7 K2W C1 O1 SING N N 8 K2W C1 C2 SING N N 9 K2W C1 C4 SING N N 10 K2W N4 C8 DOUB Y N 11 K2W N1 C9 SING Y N 12 K2W N1 C4 SING N N 13 K2W O7 C2 SING N N 14 K2W C2 C3 SING N N 15 K2W C9 N5 DOUB Y N 16 K2W C8 N5 SING Y N 17 K2W C4 O2 SING N N 18 K2W O2 C3 SING N N 19 K2W C3 C10 SING N N 20 K2W C10 N6 SING N N 21 K2W N11 C17 SING N N 22 K2W N6 C11 SING N N 23 K2W C17 N8 DOUB Y N 24 K2W C17 C16 SING Y N 25 K2W N8 C18 SING Y N 26 K2W N7 C16 SING Y N 27 K2W N7 C15 DOUB Y N 28 K2W C16 C19 DOUB Y N 29 K2W C11 C12 SING N N 30 K2W C18 N9 DOUB Y N 31 K2W C15 C14 SING N N 32 K2W C15 N10 SING Y N 33 K2W C19 N9 SING Y N 34 K2W C19 N10 SING Y N 35 K2W O6 C23 SING N N 36 K2W O6 C20 SING N N 37 K2W C24 C23 SING N N 38 K2W C24 O5 SING N N 39 K2W C14 C13 TRIP N N 40 K2W C13 C12 SING N N 41 K2W N10 C20 SING N N 42 K2W C23 C22 SING N N 43 K2W C20 C21 SING N N 44 K2W C21 C22 SING N N 45 K2W C21 O3 SING N N 46 K2W C22 O4 SING N N 47 K2W C2 H1 SING N N 48 K2W C3 H2 SING N N 49 K2W C4 H3 SING N N 50 K2W C5 H4 SING N N 51 K2W C10 H5 SING N N 52 K2W C10 H6 SING N N 53 K2W C11 H7 SING N N 54 K2W C11 H8 SING N N 55 K2W C12 H9 SING N N 56 K2W C12 H10 SING N N 57 K2W C18 H11 SING N N 58 K2W C20 H12 SING N N 59 K2W C21 H13 SING N N 60 K2W C1 H14 SING N N 61 K2W C22 H15 SING N N 62 K2W C23 H16 SING N N 63 K2W C24 H17 SING N N 64 K2W C24 H18 SING N N 65 K2W C8 H19 SING N N 66 K2W N11 H20 SING N N 67 K2W N11 H21 SING N N 68 K2W N3 H22 SING N N 69 K2W N3 H23 SING N N 70 K2W N6 H24 SING N N 71 K2W O1 H26 SING N N 72 K2W O3 H27 SING N N 73 K2W O4 H28 SING N N 74 K2W O5 H29 SING N N 75 K2W O7 H30 SING N N 76 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor K2W InChI InChI 1.03 "InChI=1S/C24H29N11O7/c25-19-13-21(30-7-28-19)34(9-32-13)23-17(39)15(37)10(41-23)5-27-4-2-1-3-12-33-14-20(26)29-8-31-22(14)35(12)24-18(40)16(38)11(6-36)42-24/h7-11,15-18,23-24,27,36-40H,2,4-6H2,(H2,25,28,30)(H2,26,29,31)/t10-,11-,15-,16-,17-,18-,23-,24-/m1/s1" K2W InChIKey InChI 1.03 HUYGUSYCJOKUJB-KRSQEUQLSA-N K2W SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CNCCC#Cc4nc5c(N)ncnc5n4[C@@H]6O[C@H](CO)[C@@H](O)[C@H]6O)[C@@H](O)[C@H]3O" K2W SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH](CNCCC#Cc4nc5c(N)ncnc5n4[CH]6O[CH](CO)[CH](O)[CH]6O)[CH](O)[CH]3O" K2W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CNCCC#Cc4nc5c(ncnc5n4[C@H]6[C@@H]([C@@H]([C@H](O6)CO)O)O)N)O)O)N" K2W SMILES "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CNCCC#Cc4nc5c(ncnc5n4C6C(C(C(O6)CO)O)O)N)O)O)N" # _pdbx_chem_comp_identifier.comp_id K2W _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[[4-[6-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-8-yl]but-3-ynylamino]methyl]oxolane-3,4-diol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site K2W "Create component" 2019-04-16 RCSB K2W "Initial release" 2020-02-19 RCSB ##