data_K3L
#
_chem_comp.id K3L
_chem_comp.name "2-[4-(4-aminobenzene-1-sulfonyl)-2-oxopiperazin-1-yl]-N-{(1R)-2-(3,5-difluorophenyl)-1-[3-(4-methoxyphenyl)-4-oxo-3,4-dihydroquinazolin-2-yl]ethyl}acetamide"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C35 H32 F2 N6 O6 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-08-10
_chem_comp.pdbx_modified_date 2023-12-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 702.727
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code K3L
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8TQP
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
K3L N1 N1 N 0 1 N N N N N N 38.237 2.469 -5.056 2.750 4.292 0.615 N1 K3L 1
K3L N3 N2 N 0 1 N N N N N N 29.853 -0.381 -2.671 2.046 -2.737 0.743 N3 K3L 2
K3L C4 C1 C 0 1 Y N N N N N 34.683 1.846 -5.848 4.360 1.348 2.113 C4 K3L 3
K3L C5 C2 C 0 1 Y N N N N N 34.563 0.493 -5.567 4.868 0.727 0.987 C5 K3L 4
K3L C6 C3 C 0 1 Y N N N N N 35.680 -0.210 -5.122 4.674 1.286 -0.262 C6 K3L 5
K3L C7 C4 C 0 1 N N N N N N 30.650 0.506 -4.788 4.326 -2.622 -0.264 C7 K3L 6
K3L C8 C5 C 0 1 N N N N N N 29.655 0.550 -3.646 2.838 -2.832 -0.325 C8 K3L 7
K3L C10 C6 C 0 1 N N N N N N 32.161 -0.917 -3.326 3.997 -2.564 2.229 C10 K3L 8
K3L C13 C7 C 0 1 N N S N N N 28.596 2.423 1.030 -2.182 -0.640 -0.400 C13 K3L 9
K3L C15 C8 C 0 1 N N N N N N 27.356 3.334 1.106 -2.095 -0.436 -1.914 C15 K3L 10
K3L C17 C9 C 0 1 Y N N N N N 28.040 5.514 0.162 0.166 -1.234 -2.631 C17 K3L 11
K3L C20 C10 C 0 1 Y N N N N N 26.866 4.926 -2.264 1.135 1.357 -2.704 C20 K3L 12
K3L C21 C11 C 0 1 Y N N N N N 26.771 4.017 -1.242 -0.178 1.117 -2.336 C21 K3L 13
K3L C22 C12 C 0 1 N N N N N N 29.786 1.620 4.581 -5.582 0.262 0.816 C22 K3L 14
K3L C24 C13 C 0 1 Y N N N N N 28.111 -0.009 3.762 -5.480 -2.144 0.265 C24 K3L 15
K3L C26 C14 C 0 1 Y N N N N N 28.265 -1.406 6.151 -8.138 -2.482 1.005 C26 K3L 16
K3L C28 C15 C 0 1 Y N N N N N 27.315 -1.148 3.957 -6.081 -3.401 0.164 C28 K3L 17
K3L C1 C16 C 0 1 Y N N N N N 36.891 0.444 -4.940 3.972 2.469 -0.390 C1 K3L 18
K3L C2 C17 C 0 1 Y N N N N N 37.028 1.809 -5.222 3.460 3.096 0.739 C2 K3L 19
K3L C3 C18 C 0 1 Y N N N N N 35.894 2.495 -5.672 3.652 2.528 1.993 C3 K3L 20
K3L S1 S1 S 0 1 N N N N N N 32.991 -0.332 -5.829 5.765 -0.782 1.145 S1 K3L 21
K3L N2 N3 N 0 1 N N N N N N 32.004 -0.062 -4.532 4.669 -2.018 1.033 N2 K3L 22
K3L C9 C19 C 0 1 N N N N N N 30.838 -1.457 -2.818 2.492 -2.335 2.070 C9 K3L 23
K3L C11 C20 C 0 1 N N N N N N 29.048 -0.426 -1.434 0.626 -3.054 0.569 C11 K3L 24
K3L O1 O1 O 0 1 N N N N N N 33.252 -1.740 -5.868 6.596 -0.877 -0.004 O1 K3L 25
K3L O2 O2 O 0 1 N N N N N N 32.350 0.294 -6.954 6.269 -0.812 2.473 O2 K3L 26
K3L C12 C21 C 0 1 N N N N N N 29.418 0.651 -0.413 -0.124 -1.804 0.186 C12 K3L 27
K3L O3 O3 O 0 1 N N N N N N 28.727 1.382 -3.688 2.336 -3.101 -1.396 O3 K3L 28
K3L O4 O4 O 0 1 N N N N N N 30.513 0.788 0.044 0.470 -0.752 0.070 O4 K3L 29
K3L N4 N4 N 0 1 N N N N N N 28.431 1.454 -0.047 -1.453 -1.855 -0.028 N4 K3L 30
K3L C14 C22 C 0 1 N N N N N N 28.770 1.731 2.355 -3.627 -0.776 0.005 C14 K3L 31
K3L C16 C23 C 0 1 Y N N N N N 27.374 4.319 -0.024 -0.662 -0.177 -2.304 C16 K3L 32
K3L C18 C24 C 0 1 Y N N N N N 28.077 6.389 -0.889 1.482 -0.998 -2.990 C18 K3L 33
K3L C19 C25 C 0 1 Y N N N N N 27.512 6.128 -2.119 1.967 0.299 -3.027 C19 K3L 34
K3L F1 F1 F 0 1 N N N N N N 28.706 7.579 -0.708 2.294 -2.031 -3.304 F1 K3L 35
K3L F2 F2 F 0 1 N N N N N N 26.301 4.630 -3.469 1.607 2.622 -2.736 F2 K3L 36
K3L N5 N5 N 0 1 N N N N N N 29.637 2.226 3.322 -4.283 0.333 0.440 N5 K3L 37
K3L C23 C26 C 0 1 Y N N N N N 28.986 0.413 4.772 -6.240 -1.049 0.733 C23 K3L 38
K3L N6 N6 N 0 1 N N N N N N 28.018 0.659 2.536 -4.186 -1.945 -0.088 N6 K3L 39
K3L C25 C27 C 0 1 Y N N N N N 29.048 -0.291 5.977 -7.571 -1.230 1.102 C25 K3L 40
K3L C27 C28 C 0 1 Y N N N N N 27.400 -1.839 5.127 -7.394 -3.561 0.545 C27 K3L 41
K3L O5 O5 O 0 1 N N N N N N 30.556 2.111 5.390 -6.180 1.246 1.211 O5 K3L 42
K3L C29 C29 C 0 1 Y N N N N N 30.374 3.449 3.115 -3.609 1.561 0.500 C29 K3L 43
K3L C30 C30 C 0 1 Y N N N N N 29.854 4.612 3.652 -2.911 1.915 1.647 C30 K3L 44
K3L C31 C31 C 0 1 Y N N N N N 30.522 5.807 3.478 -2.247 3.124 1.705 C31 K3L 45
K3L C32 C32 C 0 1 Y N N N N N 31.719 5.832 2.773 -2.277 3.985 0.617 C32 K3L 46
K3L C33 C33 C 0 1 Y N N N N N 32.239 4.656 2.232 -2.974 3.632 -0.529 C33 K3L 47
K3L C34 C34 C 0 1 Y N N N N N 31.563 3.460 2.412 -3.633 2.420 -0.591 C34 K3L 48
K3L O6 O6 O 0 1 N N N N N N 32.337 7.050 2.655 -1.624 5.176 0.675 O6 K3L 49
K3L C35 C35 C 0 1 N N N N N N 33.329 7.209 1.650 -1.697 6.013 -0.481 C35 K3L 50
K3L H6 H1 H 0 1 N N N N N N 38.130 3.431 -5.309 2.614 4.686 -0.261 H6 K3L 51
K3L H5 H2 H 0 1 N N N N N N 38.523 2.405 -4.100 2.390 4.727 1.403 H5 K3L 52
K3L H3 H3 H 0 1 N N N N N N 33.826 2.397 -6.207 4.514 0.908 3.088 H3 K3L 53
K3L H4 H4 H 0 1 N N N N N N 35.604 -1.268 -4.918 5.072 0.798 -1.140 H4 K3L 54
K3L H7 H5 H 0 1 N N N N N N 30.792 1.540 -5.134 4.835 -3.580 -0.366 H7 K3L 55
K3L H8 H6 H 0 1 N N N N N N 30.195 -0.091 -5.592 4.635 -1.957 -1.071 H8 K3L 56
K3L H12 H7 H 0 1 N N N N N N 32.627 -0.319 -2.529 4.206 -3.630 2.315 H12 K3L 57
K3L H11 H8 H 0 1 N N N N N N 32.814 -1.765 -3.578 4.353 -2.046 3.120 H11 K3L 58
K3L H16 H9 H 0 1 N N N N N N 29.479 3.049 0.833 -1.742 0.218 0.108 H16 K3L 59
K3L H18 H10 H 0 1 N N N N N N 26.447 2.718 1.038 -2.454 -1.331 -2.422 H18 K3L 60
K3L H17 H11 H 0 1 N N N N N N 27.361 3.877 2.063 -2.710 0.416 -2.203 H17 K3L 61
K3L H19 H12 H 0 1 N N N N N N 28.515 5.749 1.103 -0.212 -2.246 -2.602 H19 K3L 62
K3L H21 H13 H 0 1 N N N N N N 26.240 3.087 -1.379 -0.824 1.941 -2.072 H21 K3L 63
K3L H23 H14 H 0 1 N N N N N N 28.313 -1.955 7.080 -9.167 -2.628 1.299 H23 K3L 64
K3L H25 H15 H 0 1 N N N N N N 26.638 -1.475 3.182 -5.516 -4.245 -0.202 H25 K3L 65
K3L H1 H16 H 0 1 N N N N N N 37.743 -0.110 -4.574 3.825 2.908 -1.365 H1 K3L 66
K3L H2 H17 H 0 1 N N N N N N 35.965 3.551 -5.886 3.256 3.013 2.872 H2 K3L 67
K3L H9 H18 H 0 1 N N N N N N 30.996 -1.936 -1.840 2.272 -1.278 2.218 H9 K3L 68
K3L H10 H19 H 0 1 N N N N N N 30.455 -2.200 -3.532 1.960 -2.920 2.820 H10 K3L 69
K3L H14 H20 H 0 1 N N N N N N 27.990 -0.297 -1.705 0.514 -3.800 -0.217 H14 K3L 70
K3L H13 H21 H 0 1 N N N N N N 29.189 -1.411 -0.965 0.224 -3.447 1.503 H13 K3L 71
K3L H15 H22 H 0 1 N N N N N N 27.552 1.395 -0.520 -1.928 -2.695 0.065 H15 K3L 72
K3L H20 H23 H 0 1 N N N N N N 27.575 6.837 -2.931 2.993 0.484 -3.307 H20 K3L 73
K3L H22 H24 H 0 1 N N N N N N 29.707 0.039 6.766 -8.155 -0.395 1.460 H22 K3L 74
K3L H24 H25 H 0 1 N N N N N N 26.800 -2.725 5.271 -7.852 -4.537 0.485 H24 K3L 75
K3L H26 H26 H 0 1 N N N N N N 28.927 4.585 4.206 -2.888 1.245 2.494 H26 K3L 76
K3L H27 H27 H 0 1 N N N N N N 30.116 6.720 3.888 -1.704 3.400 2.597 H27 K3L 77
K3L H28 H28 H 0 1 N N N N N N 33.164 4.678 1.675 -2.997 4.302 -1.375 H28 K3L 78
K3L H29 H29 H 0 1 N N N N N N 31.963 2.543 2.006 -4.172 2.143 -1.485 H29 K3L 79
K3L H31 H30 H 0 1 N N N N N N 33.726 8.234 1.685 -1.273 5.488 -1.337 H31 K3L 80
K3L H30 H31 H 0 1 N N N N N N 34.146 6.494 1.825 -2.739 6.260 -0.685 H30 K3L 81
K3L H32 H32 H 0 1 N N N N N N 32.883 7.022 0.662 -1.134 6.929 -0.302 H32 K3L 82
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
K3L C1 C2 DOUB Y N 1
K3L C2 C3 SING Y N 2
K3L C3 C4 DOUB Y N 3
K3L C4 C5 SING Y N 4
K3L C5 C6 DOUB Y N 5
K3L C1 C6 SING Y N 6
K3L C2 N1 SING N N 7
K3L C5 S1 SING N N 8
K3L S1 N2 SING N N 9
K3L N2 C7 SING N N 10
K3L C7 C8 SING N N 11
K3L C8 N3 SING N N 12
K3L N3 C9 SING N N 13
K3L C9 C10 SING N N 14
K3L N2 C10 SING N N 15
K3L N3 C11 SING N N 16
K3L S1 O1 DOUB N N 17
K3L S1 O2 DOUB N N 18
K3L C11 C12 SING N N 19
K3L C8 O3 DOUB N N 20
K3L C12 O4 DOUB N N 21
K3L C12 N4 SING N N 22
K3L N4 C13 SING N N 23
K3L C13 C14 SING N N 24
K3L C13 C15 SING N N 25
K3L C15 C16 SING N N 26
K3L C16 C17 DOUB Y N 27
K3L C17 C18 SING Y N 28
K3L C18 C19 DOUB Y N 29
K3L C19 C20 SING Y N 30
K3L C20 C21 DOUB Y N 31
K3L C16 C21 SING Y N 32
K3L C18 F1 SING N N 33
K3L C20 F2 SING N N 34
K3L C14 N5 SING N N 35
K3L N5 C22 SING N N 36
K3L C22 C23 SING N N 37
K3L C23 C24 DOUB Y N 38
K3L C24 N6 SING N N 39
K3L C14 N6 DOUB N N 40
K3L C23 C25 SING Y N 41
K3L C25 C26 DOUB Y N 42
K3L C26 C27 SING Y N 43
K3L C27 C28 DOUB Y N 44
K3L C24 C28 SING Y N 45
K3L C22 O5 DOUB N N 46
K3L N5 C29 SING N N 47
K3L C29 C30 DOUB Y N 48
K3L C30 C31 SING Y N 49
K3L C31 C32 DOUB Y N 50
K3L C32 C33 SING Y N 51
K3L C33 C34 DOUB Y N 52
K3L C29 C34 SING Y N 53
K3L C32 O6 SING N N 54
K3L O6 C35 SING N N 55
K3L N1 H6 SING N N 56
K3L N1 H5 SING N N 57
K3L C4 H3 SING N N 58
K3L C6 H4 SING N N 59
K3L C7 H7 SING N N 60
K3L C7 H8 SING N N 61
K3L C10 H12 SING N N 62
K3L C10 H11 SING N N 63
K3L C13 H16 SING N N 64
K3L C15 H18 SING N N 65
K3L C15 H17 SING N N 66
K3L C17 H19 SING N N 67
K3L C21 H21 SING N N 68
K3L C26 H23 SING N N 69
K3L C28 H25 SING N N 70
K3L C1 H1 SING N N 71
K3L C3 H2 SING N N 72
K3L C9 H9 SING N N 73
K3L C9 H10 SING N N 74
K3L C11 H14 SING N N 75
K3L C11 H13 SING N N 76
K3L N4 H15 SING N N 77
K3L C19 H20 SING N N 78
K3L C25 H22 SING N N 79
K3L C27 H24 SING N N 80
K3L C30 H26 SING N N 81
K3L C31 H27 SING N N 82
K3L C33 H28 SING N N 83
K3L C34 H29 SING N N 84
K3L C35 H31 SING N N 85
K3L C35 H30 SING N N 86
K3L C35 H32 SING N N 87
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
K3L SMILES ACDLabs 12.01 "O=S(=O)(c1ccc(N)cc1)N1CC(=O)N(CC(=O)NC(Cc2cc(F)cc(F)c2)C2=Nc3ccccc3C(=O)N2c2ccc(OC)cc2)CC1"
K3L InChI InChI 1.06 "InChI=1S/C35H32F2N6O6S/c1-49-27-10-8-26(9-11-27)43-34(40-30-5-3-2-4-29(30)35(43)46)31(18-22-16-23(36)19-24(37)17-22)39-32(44)20-41-14-15-42(21-33(41)45)50(47,48)28-12-6-25(38)7-13-28/h2-13,16-17,19,31H,14-15,18,20-21,38H2,1H3,(H,39,44)/t31-/m1/s1"
K3L InChIKey InChI 1.06 FITQNIJOJSIEEB-WJOKGBTCSA-N
K3L SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1)N2C(=O)c3ccccc3N=C2[C@H](Cc4cc(F)cc(F)c4)NC(=O)CN5CCN(CC5=O)[S](=O)(=O)c6ccc(N)cc6"
K3L SMILES CACTVS 3.385 "COc1ccc(cc1)N2C(=O)c3ccccc3N=C2[CH](Cc4cc(F)cc(F)c4)NC(=O)CN5CCN(CC5=O)[S](=O)(=O)c6ccc(N)cc6"
K3L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1)N2C(=O)c3ccccc3N=C2[C@H](Cc4cc(cc(c4)F)F)NC(=O)CN5CCN(CC5=O)S(=O)(=O)c6ccc(cc6)N"
K3L SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1)N2C(=O)c3ccccc3N=C2C(Cc4cc(cc(c4)F)F)NC(=O)CN5CCN(CC5=O)S(=O)(=O)c6ccc(cc6)N"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
K3L "SYSTEMATIC NAME" ACDLabs 12.01 "2-[4-(4-aminobenzene-1-sulfonyl)-2-oxopiperazin-1-yl]-N-{(1R)-2-(3,5-difluorophenyl)-1-[3-(4-methoxyphenyl)-4-oxo-3,4-dihydroquinazolin-2-yl]ethyl}acetamide"
K3L "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[4-(4-aminophenyl)sulfonyl-2-oxidanylidene-piperazin-1-yl]-~{N}-[(1~{S})-2-[3,5-bis(fluoranyl)phenyl]-1-[3-(4-methoxyphenyl)-4-oxidanylidene-quinazolin-2-yl]ethyl]ethanamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
K3L "Create component" 2023-08-10 RCSB
K3L "Initial release" 2023-12-20 RCSB
#