data_K3X # _chem_comp.id K3X _chem_comp.name "[(3~{R})-3-azanylpiperidin-1-yl]-[2-[1-[(4-fluorophenyl)methyl]indol-2-yl]-3-methyl-imidazo[1,2-a]pyridin-7-yl]methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H28 F N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-09-07 _chem_comp.pdbx_modified_date 2023-03-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 481.564 _chem_comp.one_letter_code ? _chem_comp.three_letter_code K3X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8GOD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal K3X C36 C1 C 0 1 Y N N -8.416 13.235 44.743 6.090 3.747 0.018 C36 K3X 1 K3X C35 C2 C 0 1 Y N N -7.058 13.397 44.876 6.367 2.776 0.972 C35 K3X 2 K3X C37 C3 C 0 1 Y N N -8.956 12.725 43.585 4.881 3.771 -0.617 C37 K3X 3 K3X C28 C4 C 0 1 Y N N -5.192 14.457 40.471 4.884 -1.629 1.034 C28 K3X 4 K3X C32 C5 C 0 1 Y N N -3.299 14.101 41.899 2.700 -2.219 0.249 C32 K3X 5 K3X C34 C6 C 0 1 Y N N -6.213 13.055 43.853 5.430 1.817 1.291 C34 K3X 6 K3X C29 C7 C 0 1 Y N N -4.881 15.794 40.381 5.410 -2.747 0.416 C29 K3X 7 K3X C31 C8 C 0 1 Y N N -2.989 15.444 41.813 3.222 -3.342 -0.365 C31 K3X 8 K3X C22 C9 C 0 1 Y N N -8.340 11.838 41.250 2.558 2.547 -0.784 C22 K3X 9 K3X C23 C10 C 0 1 Y N N -8.123 12.364 42.547 3.914 2.812 -0.304 C23 K3X 10 K3X C27 C11 C 0 1 Y N N -4.400 13.616 41.227 3.529 -1.366 0.953 C27 K3X 11 K3X C24 C12 C 0 1 Y N N -6.767 12.550 42.703 4.194 1.819 0.654 C24 K3X 12 K3X C30 C13 C 0 1 Y N N -3.783 16.282 41.054 4.579 -3.605 -0.285 C30 K3X 13 K3X C3 C14 C 0 1 Y N N -6.798 11.295 39.272 0.777 0.835 -0.295 C3 K3X 14 K3X C21 C15 C 0 1 Y N N -7.104 11.701 40.656 2.109 1.455 -0.118 C21 K3X 15 K3X C2 C16 C 0 1 Y N N -7.351 11.962 38.205 0.265 0.341 -1.474 C2 K3X 16 K3X C5 C17 C 0 1 Y N N -5.864 10.480 37.543 -1.208 0.068 0.141 C5 K3X 17 K3X C6 C18 C 0 1 Y N N -5.109 9.807 36.572 -2.429 -0.337 0.712 C6 K3X 18 K3X C18 C19 C 0 1 Y N N -6.219 11.109 34.872 -3.108 -1.124 -1.471 C18 K3X 19 K3X C19 C20 C 0 1 Y N N -6.926 11.751 35.792 -1.929 -0.728 -1.985 C19 K3X 20 K3X C7 C21 C 0 1 Y N N -5.293 10.114 35.287 -3.384 -0.934 -0.093 C7 K3X 21 K3X C8 C22 C 0 1 N N N -4.484 9.412 34.258 -4.675 -1.367 0.476 C8 K3X 22 K3X C14 C23 C 0 1 N N N -3.998 12.595 32.716 -8.057 -0.360 0.603 C14 K3X 23 K3X C13 C24 C 0 1 N N N -3.148 12.313 31.510 -7.922 1.148 0.377 C13 K3X 24 K3X C15 C25 C 0 1 N N N -3.534 11.718 33.841 -6.869 -0.855 1.434 C15 K3X 25 K3X C10 C26 C 0 1 N N N -3.011 9.962 32.321 -5.431 0.961 0.421 C10 K3X 26 K3X C11 C27 C 0 1 N N R -3.290 10.867 31.134 -6.635 1.436 -0.400 C11 K3X 27 K3X C1 C28 C 0 1 N N N -8.372 13.029 38.165 0.951 0.331 -2.816 C1 K3X 28 K3X C26 C29 C 0 1 N N N -4.733 12.180 41.345 2.956 -0.150 1.633 C26 K3X 29 K3X N4 N1 N 0 1 Y N N -5.871 10.375 38.852 -0.139 0.652 0.666 N4 K3X 30 K3X N25 N2 N 0 1 Y N N -6.168 12.135 41.555 3.082 1.010 0.747 N25 K3X 31 K3X N20 N3 N 0 1 Y N N -6.760 11.417 37.105 -0.980 -0.137 -1.197 N20 K3X 32 K3X N9 N4 N 0 1 N N N -3.794 10.340 33.473 -5.624 -0.454 0.766 N9 K3X 33 K3X N16 N5 N 0 1 N N N -2.366 10.610 30.039 -6.522 2.880 -0.644 N16 K3X 34 K3X O17 O1 O 0 1 N N N -4.444 8.170 34.140 -4.884 -2.547 0.683 O17 K3X 35 K3X F33 F1 F 0 1 N N N -3.484 17.591 40.964 5.092 -4.699 -0.890 F33 K3X 36 K3X H1 H1 H 0 1 N N N -9.068 13.512 45.558 6.836 4.491 -0.220 H1 K3X 37 K3X H2 H2 H 0 1 N N N -6.654 13.797 45.794 7.326 2.773 1.468 H2 K3X 38 K3X H3 H3 H 0 1 N N N -10.025 12.608 43.489 4.673 4.529 -1.357 H3 K3X 39 K3X H4 H4 H 0 1 N N N -6.054 14.066 39.951 5.531 -0.962 1.584 H4 K3X 40 K3X H5 H5 H 0 1 N N N -2.684 13.437 42.488 1.641 -2.013 0.186 H5 K3X 41 K3X H6 H6 H 0 1 N N N -5.144 13.179 43.948 5.655 1.066 2.034 H6 K3X 42 K3X H7 H7 H 0 1 N N N -5.493 16.456 39.787 6.468 -2.952 0.479 H7 K3X 43 K3X H8 H8 H 0 1 N N N -2.130 15.837 42.336 2.573 -4.013 -0.907 H8 K3X 44 K3X H9 H9 H 0 1 N N N -9.295 11.591 40.809 2.017 3.115 -1.527 H9 K3X 45 K3X H10 H10 H 0 1 N N N -4.391 9.053 36.859 -2.619 -0.184 1.764 H10 K3X 46 K3X H11 H11 H 0 1 N N N -6.345 11.339 33.824 -3.845 -1.589 -2.109 H11 K3X 47 K3X H12 H12 H 0 1 N N N -7.622 12.526 35.507 -1.730 -0.878 -3.036 H12 K3X 48 K3X H13 H13 H 0 1 N N N -3.896 13.652 33.003 -8.985 -0.566 1.135 H13 K3X 49 K3X H14 H14 H 0 1 N N N -5.052 12.378 32.486 -8.067 -0.873 -0.359 H14 K3X 50 K3X H15 H15 H 0 1 N N N -2.095 12.531 31.743 -8.778 1.508 -0.194 H15 K3X 51 K3X H16 H16 H 0 1 N N N -3.477 12.945 30.672 -7.887 1.658 1.339 H16 K3X 52 K3X H17 H17 H 0 1 N N N -2.456 11.863 34.007 -6.909 -0.412 2.429 H17 K3X 53 K3X H18 H18 H 0 1 N N N -4.083 11.969 34.760 -6.909 -1.941 1.517 H18 K3X 54 K3X H19 H19 H 0 1 N N N -3.258 8.926 32.046 -4.521 1.073 -0.168 H19 K3X 55 K3X H20 H20 H 0 1 N N N -1.943 10.029 32.578 -5.352 1.552 1.333 H20 K3X 56 K3X H21 H21 H 0 1 N N N -4.320 10.689 30.792 -6.658 0.906 -1.352 H21 K3X 57 K3X H22 H22 H 0 1 N N N -9.373 12.577 38.102 1.445 -0.629 -2.964 H22 K3X 58 K3X H23 H23 H 0 1 N N N -8.302 13.638 39.078 0.212 0.486 -3.603 H23 K3X 59 K3X H24 H24 H 0 1 N N N -8.202 13.667 37.285 1.691 1.130 -2.851 H24 K3X 60 K3X H25 H25 H 0 1 N N N -4.462 11.645 40.423 1.903 -0.322 1.858 H25 K3X 61 K3X H26 H26 H 0 1 N N N -4.205 11.731 42.199 3.500 0.039 2.558 H26 K3X 62 K3X H27 H27 H 0 1 N N N -2.435 9.652 29.762 -5.680 3.096 -1.155 H27 K3X 63 K3X H28 H28 H 0 1 N N N -2.596 11.198 29.264 -7.337 3.230 -1.125 H28 K3X 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal K3X N16 C11 SING N N 1 K3X C11 C13 SING N N 2 K3X C11 C10 SING N N 3 K3X C13 C14 SING N N 4 K3X C10 N9 SING N N 5 K3X C14 C15 SING N N 6 K3X N9 C15 SING N N 7 K3X N9 C8 SING N N 8 K3X O17 C8 DOUB N N 9 K3X C8 C7 SING N N 10 K3X C18 C7 SING Y N 11 K3X C18 C19 DOUB Y N 12 K3X C7 C6 DOUB Y N 13 K3X C19 N20 SING Y N 14 K3X C6 C5 SING Y N 15 K3X N20 C5 SING Y N 16 K3X N20 C2 SING Y N 17 K3X C5 N4 DOUB Y N 18 K3X C1 C2 SING N N 19 K3X C2 C3 DOUB Y N 20 K3X N4 C3 SING Y N 21 K3X C3 C21 SING N N 22 K3X C29 C28 DOUB Y N 23 K3X C29 C30 SING Y N 24 K3X C28 C27 SING Y N 25 K3X C21 C22 DOUB Y N 26 K3X C21 N25 SING Y N 27 K3X F33 C30 SING N N 28 K3X C30 C31 DOUB Y N 29 K3X C27 C26 SING N N 30 K3X C27 C32 DOUB Y N 31 K3X C22 C23 SING Y N 32 K3X C26 N25 SING N N 33 K3X N25 C24 SING Y N 34 K3X C31 C32 SING Y N 35 K3X C23 C24 DOUB Y N 36 K3X C23 C37 SING Y N 37 K3X C24 C34 SING Y N 38 K3X C37 C36 DOUB Y N 39 K3X C34 C35 DOUB Y N 40 K3X C36 C35 SING Y N 41 K3X C36 H1 SING N N 42 K3X C35 H2 SING N N 43 K3X C37 H3 SING N N 44 K3X C28 H4 SING N N 45 K3X C32 H5 SING N N 46 K3X C34 H6 SING N N 47 K3X C29 H7 SING N N 48 K3X C31 H8 SING N N 49 K3X C22 H9 SING N N 50 K3X C6 H10 SING N N 51 K3X C18 H11 SING N N 52 K3X C19 H12 SING N N 53 K3X C14 H13 SING N N 54 K3X C14 H14 SING N N 55 K3X C13 H15 SING N N 56 K3X C13 H16 SING N N 57 K3X C15 H17 SING N N 58 K3X C15 H18 SING N N 59 K3X C10 H19 SING N N 60 K3X C10 H20 SING N N 61 K3X C11 H21 SING N N 62 K3X C1 H22 SING N N 63 K3X C1 H23 SING N N 64 K3X C1 H24 SING N N 65 K3X C26 H25 SING N N 66 K3X C26 H26 SING N N 67 K3X N16 H27 SING N N 68 K3X N16 H28 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor K3X InChI InChI 1.06 "InChI=1S/C29H28FN5O/c1-19-28(32-27-16-22(12-14-34(19)27)29(36)33-13-4-6-24(31)18-33)26-15-21-5-2-3-7-25(21)35(26)17-20-8-10-23(30)11-9-20/h2-3,5,7-12,14-16,24H,4,6,13,17-18,31H2,1H3/t24-/m1/s1" K3X InChIKey InChI 1.06 DUVCPNSLXBKGOK-XMMPIXPASA-N K3X SMILES_CANONICAL CACTVS 3.385 "Cc1n2ccc(cc2nc1c3cc4ccccc4n3Cc5ccc(F)cc5)C(=O)N6CCC[C@@H](N)C6" K3X SMILES CACTVS 3.385 "Cc1n2ccc(cc2nc1c3cc4ccccc4n3Cc5ccc(F)cc5)C(=O)N6CCC[CH](N)C6" K3X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(nc2n1ccc(c2)C(=O)N3CCC[C@H](C3)N)c4cc5ccccc5n4Cc6ccc(cc6)F" K3X SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(nc2n1ccc(c2)C(=O)N3CCCC(C3)N)c4cc5ccccc5n4Cc6ccc(cc6)F" # _pdbx_chem_comp_identifier.comp_id K3X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(3~{R})-3-azanylpiperidin-1-yl]-[2-[1-[(4-fluorophenyl)methyl]indol-2-yl]-3-methyl-imidazo[1,2-a]pyridin-7-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site K3X "Create component" 2022-09-07 PDBJ K3X "Initial release" 2023-03-29 RCSB #