data_K9B # _chem_comp.id K9B _chem_comp.name "(4~{R})-4-[2-[4-(2-azanylethylamino)cyclohexyl]ethanoylamino]-3,3-bis(oxidanyl)-2-oxa-3-boranuidabicyclo[4.4.0]deca-1(10),6,8-triene-10-carboxylic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H29 B N3 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 2019-05-07 _chem_comp.pdbx_modified_date 2019-10-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 406.261 _chem_comp.one_letter_code ? _chem_comp.three_letter_code K9B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6RMF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal K9B C15 C1 C 0 1 Y N N 30.359 1.340 18.523 5.819 -2.332 -1.419 C15 K9B 1 K9B C16 C2 C 0 1 Y N N 29.955 0.998 17.196 4.562 -1.957 -1.861 C16 K9B 2 K9B C19 C3 C 0 1 N N N 30.764 3.563 12.444 -1.856 1.436 -1.235 C19 K9B 3 K9B C20 C4 C 0 1 N N N 30.653 4.537 11.250 -3.099 1.192 -0.376 C20 K9B 4 K9B C21 C5 C 0 1 N N N 29.759 5.705 11.687 -4.266 2.016 -0.924 C21 K9B 5 K9B C22 C6 C 0 1 N N N 29.687 6.736 10.625 -5.509 1.772 -0.066 C22 K9B 6 K9B C23 C7 C 0 1 N N N 31.020 7.456 10.534 -5.872 0.286 -0.103 C23 K9B 7 K9B B05 B1 B -1 1 N N N 26.759 3.426 15.506 2.667 1.167 0.057 B05 K9B 8 K9B C02 C8 C 0 1 N N N 29.496 2.925 12.794 -0.677 0.723 -0.624 C02 K9B 9 K9B C04 C9 C 0 1 N N R 27.707 2.462 14.497 1.680 0.103 -0.620 C04 K9B 10 K9B C09 C10 C 0 1 Y N N 27.906 2.273 17.429 4.336 -0.429 -0.028 C09 K9B 11 K9B C10 C11 C 0 1 Y N N 28.273 2.634 18.759 5.618 -0.803 0.418 C10 K9B 12 K9B C11 C12 C 0 1 N N N 27.358 3.533 19.561 6.183 -0.191 1.634 C11 K9B 13 K9B C14 C13 C 0 1 Y N N 29.483 2.181 19.303 6.350 -1.762 -0.283 C14 K9B 14 K9B C17 C14 C 0 1 Y N N 28.704 1.468 16.655 3.824 -1.009 -1.173 C17 K9B 15 K9B C18 C15 C 0 1 N N N 28.165 1.180 15.256 2.466 -0.631 -1.712 C18 K9B 16 K9B C28 C16 C 0 1 N N N 32.063 6.410 9.980 -4.704 -0.537 0.445 C28 K9B 17 K9B C29 C17 C 0 1 N N N 32.076 5.050 10.756 -3.461 -0.294 -0.413 C29 K9B 18 K9B N03 N1 N 0 1 N N N 28.927 3.092 14.078 0.533 0.796 -1.213 N03 K9B 19 K9B O01 O1 O 0 1 N N N 28.930 2.276 11.913 -0.817 0.083 0.396 O01 K9B 20 K9B O06 O2 O 0 1 N N N 25.419 3.646 15.065 1.982 1.936 0.956 O06 K9B 21 K9B O07 O3 O 0 1 N N N 27.410 4.688 15.717 3.203 1.965 -0.915 O07 K9B 22 K9B O08 O4 O 0 1 N N N 26.706 2.719 16.867 3.662 0.494 0.696 O08 K9B 23 K9B O12 O5 O 0 1 N N N 27.820 4.378 20.435 7.410 -0.549 2.062 O12 K9B 24 K9B O13 O6 O 0 1 N N N 26.068 3.562 19.403 5.542 0.637 2.251 O13 K9B 25 K9B H151 H1 H 0 0 N N N 31.292 0.980 18.930 6.382 -3.076 -1.963 H151 K9B 26 K9B H161 H2 H 0 0 N N N 30.597 0.377 16.588 4.153 -2.409 -2.753 H161 K9B 27 K9B H191 H3 H 0 0 N N N 31.490 2.778 12.187 -2.029 1.055 -2.241 H191 K9B 28 K9B H192 H4 H 0 0 N N N 31.125 4.124 13.319 -1.650 2.505 -1.281 H192 K9B 29 K9B H201 H5 H 0 0 N N N 30.169 4.014 10.412 -2.895 1.491 0.652 H201 K9B 30 K9B H211 H6 H 0 0 N N N 30.175 6.156 12.600 -4.008 3.074 -0.898 H211 K9B 31 K9B H212 H7 H 0 0 N N N 28.747 5.327 11.893 -4.470 1.717 -1.952 H212 K9B 32 K9B H222 H8 H 0 0 N N N 28.895 7.459 10.868 -5.305 2.071 0.962 H222 K9B 33 K9B H221 H9 H 0 0 N N N 29.462 6.256 9.661 -6.341 2.359 -0.457 H221 K9B 34 K9B H1 H10 H 0 1 N N N 31.001 8.408 9.983 -6.076 -0.013 -1.131 H1 K9B 35 K9B H141 H13 H 0 0 N N N 29.760 2.462 20.308 7.330 -2.056 0.063 H141 K9B 36 K9B H182 H14 H 0 0 N N N 27.304 0.501 15.346 1.926 -1.531 -2.007 H182 K9B 37 K9B H181 H15 H 0 0 N N N 28.957 0.691 14.670 2.585 0.023 -2.577 H181 K9B 38 K9B H282 H16 H 0 0 N N N 31.821 6.205 8.927 -4.500 -0.238 1.473 H282 K9B 39 K9B H281 H17 H 0 0 N N N 33.067 6.855 10.045 -4.962 -1.596 0.419 H281 K9B 40 K9B H291 H18 H 0 0 N N N 32.502 4.284 10.092 -3.665 -0.593 -1.441 H291 K9B 41 K9B H292 H19 H 0 0 N N N 32.720 5.169 11.640 -2.629 -0.880 -0.023 H292 K9B 42 K9B H031 H20 H 0 0 N N N 29.401 3.682 14.731 0.645 1.308 -2.030 H031 K9B 43 K9B H061 H21 H 0 0 N N N 24.965 4.196 15.693 2.526 2.599 1.401 H061 K9B 44 K9B H071 H22 H 0 0 N N N 26.875 5.230 16.285 3.825 2.626 -0.582 H071 K9B 45 K9B H2 H23 H 0 1 N N N 27.101 4.875 20.806 7.738 -0.120 2.864 H2 K9B 46 K9B N1 N2 N 0 1 N N N ? ? ? -7.065 0.052 0.721 N1 K9B 47 K9B C2 C18 C 0 1 N N N ? ? ? -7.785 -1.148 0.276 C2 K9B 48 K9B C3 C19 C 0 1 N N N ? ? ? -9.019 -1.358 1.156 C3 K9B 49 K9B N2 N3 N 0 1 N N N ? ? ? -9.739 -2.559 0.711 N2 K9B 50 K9B H3 H33 H 0 1 N N N ? ? ? -6.823 -0.013 1.699 H3 K9B 51 K9B H5 H32 H 0 1 N N N ? ? ? -10.559 -2.719 1.278 H5 K9B 52 K9B H4 H24 H 0 1 N N N ? ? ? -9.981 -2.494 -0.266 H4 K9B 53 K9B H6 H25 H 0 1 N N N ? ? ? -8.096 -1.022 -0.761 H6 K9B 54 K9B H7 H26 H 0 1 N N N ? ? ? -7.130 -2.016 0.356 H7 K9B 55 K9B H8 H27 H 0 1 N N N ? ? ? -8.708 -1.484 2.194 H8 K9B 56 K9B H9 H28 H 0 1 N N N ? ? ? -9.674 -0.491 1.076 H9 K9B 57 K9B H10 H29 H 0 1 N N N 27.092 2.174 13.631 1.335 -0.610 0.129 H10 K9B 58 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal K9B C28 C23 SING N N 1 K9B C28 C29 SING N N 2 K9B C23 C22 SING N N 3 K9B C22 C21 SING N N 4 K9B C29 C20 SING N N 5 K9B C20 C21 SING N N 6 K9B C20 C19 SING N N 7 K9B O01 C02 DOUB N N 8 K9B C19 C02 SING N N 9 K9B C02 N03 SING N N 10 K9B N03 C04 SING N N 11 K9B C04 C18 SING N N 12 K9B C04 B05 SING N N 13 K9B O06 B05 SING N N 14 K9B C18 C17 SING N N 15 K9B B05 O07 SING N N 16 K9B B05 O08 SING N N 17 K9B C17 C16 DOUB Y N 18 K9B C17 C09 SING Y N 19 K9B O08 C09 SING N N 20 K9B C16 C15 SING Y N 21 K9B C09 C10 DOUB Y N 22 K9B C15 C14 DOUB Y N 23 K9B C10 C14 SING Y N 24 K9B C10 C11 SING N N 25 K9B O13 C11 DOUB N N 26 K9B C11 O12 SING N N 27 K9B C15 H151 SING N N 28 K9B C16 H161 SING N N 29 K9B C19 H191 SING N N 30 K9B C19 H192 SING N N 31 K9B C20 H201 SING N N 32 K9B C21 H211 SING N N 33 K9B C21 H212 SING N N 34 K9B C22 H222 SING N N 35 K9B C22 H221 SING N N 36 K9B C23 H1 SING N N 37 K9B C14 H141 SING N N 38 K9B C18 H182 SING N N 39 K9B C18 H181 SING N N 40 K9B C28 H282 SING N N 41 K9B C28 H281 SING N N 42 K9B C29 H291 SING N N 43 K9B C29 H292 SING N N 44 K9B N03 H031 SING N N 45 K9B O06 H061 SING N N 46 K9B O07 H071 SING N N 47 K9B O12 H2 SING N N 48 K9B C23 N1 SING N N 49 K9B N1 C2 SING N N 50 K9B C2 C3 SING N N 51 K9B C3 N2 SING N N 52 K9B N1 H3 SING N N 53 K9B N2 H5 SING N N 54 K9B N2 H4 SING N N 55 K9B C2 H6 SING N N 56 K9B C2 H7 SING N N 57 K9B C3 H8 SING N N 58 K9B C3 H9 SING N N 59 K9B C04 H10 SING N N 60 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor K9B InChI InChI 1.03 "InChI=1S/C19H29BN3O6/c21-8-9-22-14-6-4-12(5-7-14)10-17(24)23-16-11-13-2-1-3-15(19(25)26)18(13)29-20(16,27)28/h1-3,12,14,16,22,27-28H,4-11,21H2,(H,23,24)(H,25,26)/q-1/t12-,14-,16-/m0/s1" K9B InChIKey InChI 1.03 BZPCNLIYJBPHQK-NOLJZWGESA-N K9B SMILES_CANONICAL CACTVS 3.385 "NCCN[C@H]1CC[C@@H](CC1)CC(=O)N[C@H]2Cc3cccc(C(O)=O)c3O[B-]2(O)O" K9B SMILES CACTVS 3.385 "NCCN[CH]1CC[CH](CC1)CC(=O)N[CH]2Cc3cccc(C(O)=O)c3O[B-]2(O)O" K9B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[B-]1([C@H](Cc2cccc(c2O1)C(=O)O)NC(=O)CC3CCC(CC3)NCCN)(O)O" K9B SMILES "OpenEye OEToolkits" 2.0.7 "[B-]1(C(Cc2cccc(c2O1)C(=O)O)NC(=O)CC3CCC(CC3)NCCN)(O)O" # _pdbx_chem_comp_identifier.comp_id K9B _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4~{R})-4-[2-[4-(2-azanylethylamino)cyclohexyl]ethanoylamino]-3,3-bis(oxidanyl)-2-oxa-3-boranuidabicyclo[4.4.0]deca-1(10),6,8-triene-10-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site K9B "Create component" 2019-05-07 PDBE K9B "Initial release" 2019-09-11 RCSB K9B "Other modification" 2019-10-18 PDBE ##