data_K9G # _chem_comp.id K9G _chem_comp.name "[(2~{R})-1-hexadecanoyloxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propan-2-yl] octadec-9-enoate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C42 H83 N O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-11-13 _chem_comp.pdbx_modified_date 2023-03-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 761.084 _chem_comp.one_letter_code ? _chem_comp.three_letter_code K9G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 6MXM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal K9G C07 C1 C 0 1 N N N 40.184 31.600 12.845 ? ? ? C07 K9G 1 K9G C08 C2 C 0 1 N N N 39.341 32.785 13.310 ? ? ? C08 K9G 2 K9G C09 C3 C 0 1 N N N 40.143 34.077 13.373 ? ? ? C09 K9G 3 K9G C10 C4 C 0 1 N N N 39.416 35.235 12.687 ? ? ? C10 K9G 4 K9G C11 C5 C 0 1 N N N 40.039 36.603 13.003 ? ? ? C11 K9G 5 K9G C12 C6 C 0 1 N N N 39.458 37.725 12.133 ? ? ? C12 K9G 6 K9G C13 C7 C 0 1 N N N 40.207 39.051 12.322 ? ? ? C13 K9G 7 K9G C14 C8 C 0 1 N N N 39.459 40.251 11.739 ? ? ? C14 K9G 8 K9G C15 C9 C 0 1 N N N 39.614 41.472 12.638 ? ? ? C15 K9G 9 K9G C16 C10 C 0 1 N N N 38.940 42.733 12.081 ? ? ? C16 K9G 10 K9G C19 C11 C 0 1 N N N 36.972 43.975 12.604 ? ? ? C19 K9G 11 K9G C20 C12 C 0 1 N N R 35.982 43.160 13.441 ? ? ? C20 K9G 12 K9G C21 C13 C 0 1 N N N 35.120 44.076 14.299 ? ? ? C21 K9G 13 K9G C27 C14 C 0 1 N N N 31.777 45.511 14.531 ? ? ? C27 K9G 14 K9G C28 C15 C 0 1 N N N 30.380 46.061 14.839 ? ? ? C28 K9G 15 K9G C30 C16 C 0 1 N N N 30.711 47.544 16.693 ? ? ? C30 K9G 16 K9G C31 C17 C 0 1 N N N 29.033 47.993 15.103 ? ? ? C31 K9G 17 K9G C32 C18 C 0 1 N N N 31.292 48.256 14.493 ? ? ? C32 K9G 18 K9G C34 C19 C 0 1 N N N 36.070 40.999 14.399 ? ? ? C34 K9G 19 K9G C36 C20 C 0 1 N N N 36.806 39.879 15.172 ? ? ? C36 K9G 20 K9G C37 C21 C 0 1 N N N 35.912 38.642 15.383 ? ? ? C37 K9G 21 K9G C38 C22 C 0 1 N N N 36.768 37.419 15.789 ? ? ? C38 K9G 22 K9G C39 C23 C 0 1 N N N 36.012 36.420 16.696 ? ? ? C39 K9G 23 K9G C40 C24 C 0 1 N N N 36.866 35.144 16.930 ? ? ? C40 K9G 24 K9G C41 C25 C 0 1 N N N 36.109 34.067 17.733 ? ? ? C41 K9G 25 K9G N29 N1 N 0 1 N N N 30.370 47.456 15.283 ? ? ? N29 K9G 26 K9G O17 O1 O 0 1 N N N 38.986 42.960 10.919 ? ? ? O17 K9G 27 K9G O18 O2 O 0 1 N N N 38.285 43.616 12.963 ? ? ? O18 K9G 28 K9G O22 O3 O 0 1 N N N 34.021 43.291 14.671 ? ? ? O22 K9G 29 K9G O24 O4 O 0 1 N N N 33.962 43.852 17.224 ? ? ? O24 K9G 30 K9G O25 O5 O 0 1 N N N 32.027 42.648 16.190 ? ? ? O25 K9G 31 K9G O26 O6 O 0 1 N N N 32.411 45.185 15.740 ? ? ? O26 K9G 32 K9G O33 O7 O 0 1 N N N 36.646 42.291 14.318 ? ? ? O33 K9G 33 K9G O35 O8 O 0 1 N N N 35.025 40.769 13.885 ? ? ? O35 K9G 34 K9G P23 P1 P 0 1 N N N 33.100 43.705 15.986 ? ? ? P23 K9G 35 K9G H1 H1 H 0 1 N N N 40.819 31.847 11.981 ? ? ? H1 K9G 36 K9G H2 H2 H 0 1 N N N 40.807 31.184 13.651 ? ? ? H2 K9G 37 K9G H4 H4 H 0 1 N N N 38.505 32.922 12.608 ? ? ? H4 K9G 38 K9G H5 H5 H 0 1 N N N 38.945 32.565 14.313 ? ? ? H5 K9G 39 K9G H6 H6 H 0 1 N N N 41.111 33.919 12.874 ? ? ? H6 K9G 40 K9G H7 H7 H 0 1 N N N 40.313 34.339 14.428 ? ? ? H7 K9G 41 K9G H8 H8 H 0 1 N N N 38.369 35.240 13.023 ? ? ? H8 K9G 42 K9G H9 H9 H 0 1 N N N 39.451 35.076 11.599 ? ? ? H9 K9G 43 K9G H10 H10 H 0 1 N N N 41.124 36.546 12.828 ? ? ? H10 K9G 44 K9G H11 H11 H 0 1 N N N 39.850 36.842 14.060 ? ? ? H11 K9G 45 K9G H12 H12 H 0 1 N N N 38.402 37.873 12.404 ? ? ? H12 K9G 46 K9G H13 H13 H 0 1 N N N 39.527 37.426 11.077 ? ? ? H13 K9G 47 K9G H14 H14 H 0 1 N N N 41.186 38.974 11.826 ? ? ? H14 K9G 48 K9G H15 H15 H 0 1 N N N 40.354 39.220 13.399 ? ? ? H15 K9G 49 K9G H16 H16 H 0 1 N N N 39.867 40.482 10.744 ? ? ? H16 K9G 50 K9G H17 H17 H 0 1 N N N 38.391 40.002 11.649 ? ? ? H17 K9G 51 K9G H18 H18 H 0 1 N N N 39.168 41.242 13.617 ? ? ? H18 K9G 52 K9G H19 H19 H 0 1 N N N 40.687 41.678 12.764 ? ? ? H19 K9G 53 K9G H20 H20 H 0 1 N N N 36.819 45.048 12.794 ? ? ? H20 K9G 54 K9G H21 H21 H 0 1 N N N 36.812 43.765 11.536 ? ? ? H21 K9G 55 K9G H22 H22 H 0 1 N N N 35.329 42.594 12.761 ? ? ? H22 K9G 56 K9G H23 H23 H 0 1 N N N 35.676 44.410 15.188 ? ? ? H23 K9G 57 K9G H24 H24 H 0 1 N N N 34.792 44.952 13.721 ? ? ? H24 K9G 58 K9G H25 H25 H 0 1 N N N 31.690 44.611 13.905 ? ? ? H25 K9G 59 K9G H26 H26 H 0 1 N N N 32.365 46.273 13.999 ? ? ? H26 K9G 60 K9G H27 H27 H 0 1 N N N 29.770 45.985 13.927 ? ? ? H27 K9G 61 K9G H28 H28 H 0 1 N N N 29.933 45.443 15.632 ? ? ? H28 K9G 62 K9G H29 H29 H 0 1 N N N 30.007 46.935 17.280 ? ? ? H29 K9G 63 K9G H30 H30 H 0 1 N N N 31.734 47.171 16.847 ? ? ? H30 K9G 64 K9G H31 H31 H 0 1 N N N 30.650 48.592 17.020 ? ? ? H31 K9G 65 K9G H32 H32 H 0 1 N N N 28.317 47.402 15.693 ? ? ? H32 K9G 66 K9G H33 H33 H 0 1 N N N 29.010 49.040 15.441 ? ? ? H33 K9G 67 K9G H34 H34 H 0 1 N N N 28.759 47.945 14.039 ? ? ? H34 K9G 68 K9G H35 H35 H 0 1 N N N 31.267 49.298 14.844 ? ? ? H35 K9G 69 K9G H36 H36 H 0 1 N N N 32.311 47.856 14.603 ? ? ? H36 K9G 70 K9G H37 H37 H 0 1 N N N 30.995 48.219 13.434 ? ? ? H37 K9G 71 K9G H38 H38 H 0 1 N N N 37.698 39.580 14.601 ? ? ? H38 K9G 72 K9G H39 H39 H 0 1 N N N 37.113 40.268 16.154 ? ? ? H39 K9G 73 K9G H40 H40 H 0 1 N N N 35.183 38.854 16.179 ? ? ? H40 K9G 74 K9G H41 H41 H 0 1 N N N 35.379 38.417 14.448 ? ? ? H41 K9G 75 K9G H42 H42 H 0 1 N N N 37.082 36.893 14.875 ? ? ? H42 K9G 76 K9G H43 H43 H 0 1 N N N 37.657 37.778 16.329 ? ? ? H43 K9G 77 K9G H44 H44 H 0 1 N N N 35.802 36.898 17.664 ? ? ? H44 K9G 78 K9G H45 H45 H 0 1 N N N 35.065 36.138 16.213 ? ? ? H45 K9G 79 K9G H46 H46 H 0 1 N N N 37.147 34.723 15.953 ? ? ? H46 K9G 80 K9G H47 H47 H 0 1 N N N 37.774 35.424 17.484 ? ? ? H47 K9G 81 K9G H48 H48 H 0 1 N N N 36.898 33.436 18.168 ? ? ? H48 K9G 82 K9G H49 H49 H 0 1 N N N 35.600 34.622 18.534 ? ? ? H49 K9G 83 K9G H51 H51 H 0 1 N N N 33.661 43.249 17.893 ? ? ? H51 K9G 84 K9G C01 C01 C 0 1 N N N ? ? ? ? ? ? C01 K9G 85 K9G C02 C02 C 0 1 N N N ? ? ? ? ? ? C02 K9G 86 K9G C03 C03 C 0 1 N N N ? ? ? ? ? ? C03 K9G 87 K9G C04 C04 C 0 1 N N N ? ? ? ? ? ? C04 K9G 88 K9G C05 C05 C 0 1 N N N ? ? ? ? ? ? C05 K9G 89 K9G C06 C06 C 0 1 N N N ? ? ? ? ? ? C06 K9G 90 K9G C42 C42 C 0 1 N N N ? ? ? ? ? ? C42 K9G 91 K9G C43 C43 C 0 1 N N N ? ? ? ? ? ? C43 K9G 92 K9G C44 C44 C 0 1 N N N ? ? ? ? ? ? C44 K9G 93 K9G C45 C45 C 0 1 N N N ? ? ? ? ? ? C45 K9G 94 K9G C46 C46 C 0 1 N N N ? ? ? ? ? ? C46 K9G 95 K9G C47 C47 C 0 1 N N N ? ? ? ? ? ? C47 K9G 96 K9G C48 C48 C 0 1 N N N ? ? ? ? ? ? C48 K9G 97 K9G C49 C49 C 0 1 N N N ? ? ? ? ? ? C49 K9G 98 K9G C50 C50 C 0 1 N N N ? ? ? ? ? ? C50 K9G 99 K9G C51 C51 C 0 1 N N N ? ? ? ? ? ? C51 K9G 100 K9G C52 C52 C 0 1 N N N ? ? ? ? ? ? C52 K9G 101 K9G H3 H3 H 0 1 N N N ? ? ? ? ? ? H3 K9G 102 K9G H50 H50 H 0 1 N N N ? ? ? ? ? ? H50 K9G 103 K9G H52 H52 H 0 1 N N N ? ? ? ? ? ? H52 K9G 104 K9G H53 H53 H 0 1 N N N ? ? ? ? ? ? H53 K9G 105 K9G H54 H54 H 0 1 N N N ? ? ? ? ? ? H54 K9G 106 K9G H55 H55 H 0 1 N N N ? ? ? ? ? ? H55 K9G 107 K9G H56 H56 H 0 1 N N N ? ? ? ? ? ? H56 K9G 108 K9G H57 H57 H 0 1 N N N ? ? ? ? ? ? H57 K9G 109 K9G H58 H58 H 0 1 N N N ? ? ? ? ? ? H58 K9G 110 K9G H59 H59 H 0 1 N N N ? ? ? ? ? ? H59 K9G 111 K9G H60 H60 H 0 1 N N N ? ? ? ? ? ? H60 K9G 112 K9G H61 H61 H 0 1 N N N ? ? ? ? ? ? H61 K9G 113 K9G H62 H62 H 0 1 N N N ? ? ? ? ? ? H62 K9G 114 K9G H63 H63 H 0 1 N N N ? ? ? ? ? ? H63 K9G 115 K9G H64 H64 H 0 1 N N N ? ? ? ? ? ? H64 K9G 116 K9G H65 H65 H 0 1 N N N ? ? ? ? ? ? H65 K9G 117 K9G H67 H67 H 0 1 N N N ? ? ? ? ? ? H67 K9G 118 K9G H69 H69 H 0 1 N N N ? ? ? ? ? ? H69 K9G 119 K9G H70 H70 H 0 1 N N N ? ? ? ? ? ? H70 K9G 120 K9G H71 H71 H 0 1 N N N ? ? ? ? ? ? H71 K9G 121 K9G H72 H72 H 0 1 N N N ? ? ? ? ? ? H72 K9G 122 K9G H73 H73 H 0 1 N N N ? ? ? ? ? ? H73 K9G 123 K9G H74 H74 H 0 1 N N N ? ? ? ? ? ? H74 K9G 124 K9G H75 H75 H 0 1 N N N ? ? ? ? ? ? H75 K9G 125 K9G H76 H76 H 0 1 N N N ? ? ? ? ? ? H76 K9G 126 K9G H77 H77 H 0 1 N N N ? ? ? ? ? ? H77 K9G 127 K9G H78 H78 H 0 1 N N N ? ? ? ? ? ? H78 K9G 128 K9G H79 H79 H 0 1 N N N ? ? ? ? ? ? H79 K9G 129 K9G H80 H80 H 0 1 N N N ? ? ? ? ? ? H80 K9G 130 K9G H81 H81 H 0 1 N N N ? ? ? ? ? ? H81 K9G 131 K9G H82 H82 H 0 1 N N N ? ? ? ? ? ? H82 K9G 132 K9G H83 H83 H 0 1 N N N ? ? ? ? ? ? H83 K9G 133 K9G H84 H84 H 0 1 N N N ? ? ? ? ? ? H84 K9G 134 K9G H85 H85 H 0 1 N N N ? ? ? ? ? ? H85 K9G 135 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal K9G O17 C16 DOUB N N 1 K9G C14 C13 SING N N 2 K9G C14 C15 SING N N 3 K9G C16 C15 SING N N 4 K9G C16 O18 SING N N 5 K9G C12 C13 SING N N 6 K9G C12 C11 SING N N 7 K9G C19 O18 SING N N 8 K9G C19 C20 SING N N 9 K9G C10 C11 SING N N 10 K9G C10 C09 SING N N 11 K9G C07 C08 SING N N 12 K9G C08 C09 SING N N 13 K9G C20 C21 SING N N 14 K9G C20 O33 SING N N 15 K9G O35 C34 DOUB N N 16 K9G C21 O22 SING N N 17 K9G O33 C34 SING N N 18 K9G C34 C36 SING N N 19 K9G C32 N29 SING N N 20 K9G C27 C28 SING N N 21 K9G C27 O26 SING N N 22 K9G O22 P23 SING N N 23 K9G C28 N29 SING N N 24 K9G C31 N29 SING N N 25 K9G C36 C37 SING N N 26 K9G N29 C30 SING N N 27 K9G C37 C38 SING N N 28 K9G O26 P23 SING N N 29 K9G C38 C39 SING N N 30 K9G P23 O25 DOUB N N 31 K9G P23 O24 SING N N 32 K9G C39 C40 SING N N 33 K9G C40 C41 SING N N 34 K9G C07 H1 SING N N 35 K9G C07 H2 SING N N 36 K9G C08 H4 SING N N 37 K9G C08 H5 SING N N 38 K9G C09 H6 SING N N 39 K9G C09 H7 SING N N 40 K9G C10 H8 SING N N 41 K9G C10 H9 SING N N 42 K9G C11 H10 SING N N 43 K9G C11 H11 SING N N 44 K9G C12 H12 SING N N 45 K9G C12 H13 SING N N 46 K9G C13 H14 SING N N 47 K9G C13 H15 SING N N 48 K9G C14 H16 SING N N 49 K9G C14 H17 SING N N 50 K9G C15 H18 SING N N 51 K9G C15 H19 SING N N 52 K9G C19 H20 SING N N 53 K9G C19 H21 SING N N 54 K9G C20 H22 SING N N 55 K9G C21 H23 SING N N 56 K9G C21 H24 SING N N 57 K9G C27 H25 SING N N 58 K9G C27 H26 SING N N 59 K9G C28 H27 SING N N 60 K9G C28 H28 SING N N 61 K9G C30 H29 SING N N 62 K9G C30 H30 SING N N 63 K9G C30 H31 SING N N 64 K9G C31 H32 SING N N 65 K9G C31 H33 SING N N 66 K9G C31 H34 SING N N 67 K9G C32 H35 SING N N 68 K9G C32 H36 SING N N 69 K9G C32 H37 SING N N 70 K9G C36 H38 SING N N 71 K9G C36 H39 SING N N 72 K9G C37 H40 SING N N 73 K9G C37 H41 SING N N 74 K9G C38 H42 SING N N 75 K9G C38 H43 SING N N 76 K9G C39 H44 SING N N 77 K9G C39 H45 SING N N 78 K9G C40 H46 SING N N 79 K9G C40 H47 SING N N 80 K9G C41 H48 SING N N 81 K9G C41 H49 SING N N 82 K9G O24 H51 SING N N 83 K9G C01 C02 SING N N 84 K9G C02 C03 SING N N 85 K9G C03 C04 SING N N 86 K9G C04 C05 SING N N 87 K9G C05 C06 SING N N 88 K9G C06 C07 SING N N 89 K9G C41 C42 SING N N 90 K9G C42 C43 SING N N 91 K9G C43 C44 DOUB N N 92 K9G C44 C45 SING N N 93 K9G C45 C46 SING N N 94 K9G C46 C47 SING N N 95 K9G C47 C48 SING N N 96 K9G C48 C49 SING N N 97 K9G C49 C50 SING N N 98 K9G C50 C51 SING N N 99 K9G C51 C52 SING N N 100 K9G C01 H3 SING N N 101 K9G C01 H50 SING N N 102 K9G C01 H52 SING N N 103 K9G C02 H53 SING N N 104 K9G C02 H54 SING N N 105 K9G C03 H55 SING N N 106 K9G C03 H56 SING N N 107 K9G C04 H57 SING N N 108 K9G C04 H58 SING N N 109 K9G C05 H59 SING N N 110 K9G C05 H60 SING N N 111 K9G C06 H61 SING N N 112 K9G C06 H62 SING N N 113 K9G C42 H63 SING N N 114 K9G C42 H64 SING N N 115 K9G C43 H65 SING N N 116 K9G C44 H67 SING N N 117 K9G C45 H69 SING N N 118 K9G C45 H70 SING N N 119 K9G C46 H71 SING N N 120 K9G C46 H72 SING N N 121 K9G C47 H73 SING N N 122 K9G C47 H74 SING N N 123 K9G C48 H75 SING N N 124 K9G C48 H76 SING N N 125 K9G C49 H77 SING N N 126 K9G C49 H78 SING N N 127 K9G C50 H79 SING N N 128 K9G C50 H80 SING N N 129 K9G C51 H81 SING N N 130 K9G C51 H82 SING N N 131 K9G C52 H83 SING N N 132 K9G C52 H84 SING N N 133 K9G C52 H85 SING N N 134 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor K9G InChI InChI 1.03 "InChI=1S/C42H83NO8P/c1-6-8-10-12-14-16-18-20-21-23-25-27-29-31-33-35-42(45)51-40(39-50-52(46,47)49-37-36-43(3,4)5)38-48-41(44)34-32-30-28-26-24-22-19-17-15-13-11-9-7-2/h20-21,40H,6-19,22-39H2,1-5H3,(H,46,47)/t40-/m1/s1" K9G InChIKey InChI 1.03 BOJPVJHVFVFGBS-RRHRGVEJSA-N K9G SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P](O)(=O)OCC[N](C)(C)C)OC(=O)CCCCCCCC=CCCCCCCCC" K9G SMILES CACTVS 3.385 "CCCCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OCC[N](C)(C)C)OC(=O)CCCCCCCC=CCCCCCCCC" K9G SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OCC[N](C)(C)C)OC(=O)CCCCCCCC=CCCCCCCCC" K9G SMILES "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCC[N](C)(C)C)OC(=O)CCCCCCCC=CCCCCCCCC" # _pdbx_chem_comp_identifier.comp_id K9G _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "[(2~{R})-1-hexadecanoyloxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propan-2-yl] octadec-9-enoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site K9G "Create component" 2018-11-13 RCSB K9G "Initial release" 2023-03-22 RCSB #