data_K9J # _chem_comp.id K9J _chem_comp.name "1-{4-[2-{[(2R)-1-(dimethylamino)propan-2-yl]oxy}-7-(3-hydroxynaphthalen-1-yl)-5,6,7,8-tetrahydropyrido[3,4-d]pyrimidin-4-yl]piperazin-1-yl}propan-1-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H38 N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-11-14 _chem_comp.pdbx_modified_date 2018-12-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 518.650 _chem_comp.one_letter_code ? _chem_comp.three_letter_code K9J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6N2K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal K9J C18 C1 C 0 1 Y N N 19.169 3.826 -25.680 -4.459 -1.142 -1.562 C18 K9J 1 K9J C13 C2 C 0 1 N N N 27.575 1.358 -22.268 4.214 -2.606 -1.312 C13 K9J 2 K9J C12 C3 C 0 1 N N N 26.882 2.710 -22.055 3.367 -1.334 -1.429 C12 K9J 3 K9J C17 C4 C 0 1 Y N N 19.316 3.858 -24.294 -3.896 -1.079 -0.307 C17 K9J 4 K9J C16 C5 C 0 1 N N N 24.842 1.155 -21.900 3.228 -1.111 0.982 C16 K9J 5 K9J C15 C6 C 0 1 N N N 25.660 0.511 -20.798 4.069 -2.374 1.197 C15 K9J 6 K9J C10 C7 C 0 1 Y N N 24.590 3.608 -22.283 1.576 -0.191 -0.418 C10 K9J 7 K9J C8 C8 C 0 1 Y N N 24.350 5.784 -21.701 1.160 2.062 -0.649 C8 K9J 8 K9J C22 C9 C 0 1 Y N N 18.188 4.095 -23.448 -4.714 -1.235 0.833 C22 K9J 9 K9J N2 N1 N 0 1 N N N 20.620 3.647 -23.683 -2.527 -0.864 -0.164 N2 K9J 10 K9J C5 C10 C 0 1 Y N N 23.281 3.605 -22.801 0.200 -0.433 -0.465 C5 K9J 11 K9J C6 C11 C 0 1 N N N 22.708 2.411 -23.589 -0.305 -1.846 -0.350 C6 K9J 12 K9J C1 C12 C 0 1 N N N 21.621 2.942 -24.570 -1.754 -1.921 -0.835 C1 K9J 13 K9J C4 C13 C 0 1 Y N N 22.547 4.797 -22.719 -0.653 0.634 -0.611 C4 K9J 14 K9J C19 C14 C 0 1 Y N N 17.896 4.081 -26.275 -5.831 -1.353 -1.718 C19 K9J 15 K9J C20 C15 C 0 1 Y N N 16.783 4.352 -25.489 -6.651 -1.502 -0.623 C20 K9J 16 K9J C21 C16 C 0 1 Y N N 16.928 4.338 -24.056 -6.104 -1.454 0.670 C21 K9J 17 K9J C3 C17 C 0 1 N N N 21.163 4.965 -23.268 -2.146 0.455 -0.682 C3 K9J 18 K9J N7 N2 N 0 1 Y N N 23.099 5.909 -22.187 -0.145 1.860 -0.697 N7 K9J 19 K9J N9 N3 N 0 1 Y N N 25.142 4.721 -21.752 2.014 1.060 -0.512 N9 K9J 20 K9J N11 N4 N 0 1 N N N 25.437 2.455 -22.302 2.470 -1.239 -0.269 N11 K9J 21 K9J N14 N5 N 0 1 N N N 27.069 0.344 -21.314 4.886 -2.601 -0.004 N14 K9J 22 K9J C23 C18 C 0 1 N N N 27.871 -0.608 -20.769 6.216 -2.801 0.091 C23 K9J 23 K9J C24 C19 C 0 1 N N N 29.184 -0.904 -21.468 6.885 -2.792 1.441 C24 K9J 24 K9J O25 O1 O 0 1 N N N 27.505 -1.237 -19.746 6.874 -2.988 -0.910 O25 K9J 25 K9J C26 C20 C 0 1 N N N 30.419 -0.487 -20.525 8.384 -3.041 1.270 C26 K9J 26 K9J C27 C21 C 0 1 Y N N 15.776 4.582 -23.252 -6.916 -1.603 1.809 C27 K9J 27 K9J C28 C22 C 0 1 Y N N 15.870 4.545 -21.837 -6.355 -1.551 3.048 C28 K9J 28 K9J C29 C23 C 0 1 Y N N 17.139 4.264 -21.286 -4.985 -1.352 3.206 C29 K9J 29 K9J C30 C24 C 0 1 Y N N 18.308 4.097 -22.040 -4.173 -1.176 2.127 C30 K9J 30 K9J O31 O2 O 0 1 N N N 17.830 4.042 -27.669 -6.363 -1.411 -2.967 O31 K9J 31 K9J O32 O3 O 0 1 N N N 24.827 6.960 -21.220 1.636 3.326 -0.740 O32 K9J 32 K9J C33 C25 C 0 1 N N R 26.088 6.963 -20.495 0.674 4.373 -0.886 C33 K9J 33 K9J C34 C26 C 0 1 N N N 26.605 8.385 -20.349 1.214 5.655 -0.251 C34 K9J 34 K9J N35 N6 N 0 1 N N N 26.714 8.888 -21.717 1.473 5.423 1.176 N35 K9J 35 K9J C36 C27 C 0 1 N N N 28.109 9.001 -22.159 2.211 6.548 1.767 C36 K9J 36 K9J C37 C28 C 0 1 N N N 26.036 10.222 -21.786 0.222 5.173 1.905 C37 K9J 37 K9J C38 C29 C 0 1 N N N 25.971 6.299 -19.116 0.404 4.614 -2.373 C38 K9J 38 K9J H1 H1 H 0 1 N N N 20.021 3.607 -26.306 -3.835 -1.023 -2.435 H1 K9J 39 K9J H2 H2 H 0 1 N N N 27.382 1.013 -23.295 3.571 -3.483 -1.390 H2 K9J 40 K9J H3 H3 H 0 1 N N N 28.658 1.482 -22.120 4.959 -2.624 -2.107 H3 K9J 41 K9J H4 H4 H 0 1 N N N 27.268 3.457 -22.765 4.022 -0.463 -1.455 H4 K9J 42 K9J H5 H5 H 0 1 N N N 27.040 3.066 -21.026 2.777 -1.373 -2.344 H5 K9J 43 K9J H6 H6 H 0 1 N N N 23.817 1.323 -21.538 2.537 -0.988 1.816 H6 K9J 44 K9J H7 H7 H 0 1 N N N 24.818 0.484 -22.771 3.885 -0.242 0.923 H7 K9J 45 K9J H8 H8 H 0 1 N N N 25.661 1.155 -19.906 4.720 -2.237 2.062 H8 K9J 46 K9J H9 H9 H 0 1 N N N 25.236 -0.471 -20.541 3.412 -3.227 1.364 H9 K9J 47 K9J H10 H10 H 0 1 N N N 22.258 1.688 -22.892 0.315 -2.503 -0.960 H10 K9J 48 K9J H11 H11 H 0 1 N N N 23.513 1.921 -24.157 -0.255 -2.165 0.691 H11 K9J 49 K9J H12 H12 H 0 1 N N N 21.144 2.110 -25.109 -2.173 -2.895 -0.585 H12 K9J 50 K9J H13 H13 H 0 1 N N N 22.061 3.644 -25.294 -1.787 -1.770 -1.914 H13 K9J 51 K9J H14 H14 H 0 1 N N N 15.828 4.569 -25.944 -7.710 -1.664 -0.757 H14 K9J 52 K9J H15 H15 H 0 1 N N N 21.195 5.637 -24.139 -2.471 0.543 -1.718 H15 K9J 53 K9J H16 H16 H 0 1 N N N 20.514 5.399 -22.494 -2.631 1.229 -0.088 H16 K9J 54 K9J H17 H17 H 0 1 N N N 29.243 -1.980 -21.691 6.729 -1.824 1.918 H17 K9J 55 K9J H18 H18 H 0 1 N N N 29.234 -0.332 -22.406 6.455 -3.577 2.065 H18 K9J 56 K9J H19 H19 H 0 1 N N N 31.365 -0.706 -21.041 8.868 -3.034 2.246 H19 K9J 57 K9J H20 H20 H 0 1 N N N 30.363 0.589 -20.302 8.540 -4.009 0.793 H20 K9J 58 K9J H21 H21 H 0 1 N N N 30.373 -1.059 -19.586 8.814 -2.256 0.646 H21 K9J 59 K9J H22 H22 H 0 1 N N N 14.828 4.796 -23.722 -7.979 -1.757 1.701 H22 K9J 60 K9J H23 H23 H 0 1 N N N 15.009 4.724 -21.209 -6.980 -1.665 3.920 H23 K9J 61 K9J H24 H24 H 0 1 N N N 17.214 4.172 -20.213 -4.564 -1.314 4.200 H24 K9J 62 K9J H25 H25 H 0 1 N N N 19.268 3.974 -21.561 -3.115 -1.010 2.266 H25 K9J 63 K9J H26 H26 H 0 1 N N N 16.941 4.225 -27.950 -6.381 -2.301 -3.346 H26 K9J 64 K9J H27 H27 H 0 1 N N N 26.829 6.394 -21.076 -0.254 4.085 -0.391 H27 K9J 65 K9J H28 H28 H 0 1 N N N 27.588 8.391 -19.855 2.142 5.943 -0.746 H28 K9J 66 K9J H29 H29 H 0 1 N N N 25.899 8.996 -19.767 0.480 6.453 -0.362 H29 K9J 67 K9J H31 H31 H 0 1 N N N 28.593 8.015 -22.103 1.625 7.462 1.662 H31 K9J 68 K9J H32 H32 H 0 1 N N N 28.136 9.364 -23.197 2.389 6.351 2.824 H32 K9J 69 K9J H33 H33 H 0 1 N N N 28.643 9.709 -21.509 3.165 6.667 1.254 H33 K9J 70 K9J H34 H34 H 0 1 N N N 24.993 10.121 -21.452 -0.269 4.293 1.491 H34 K9J 71 K9J H35 H35 H 0 1 N N N 26.562 10.935 -21.134 0.443 5.005 2.958 H35 K9J 72 K9J H36 H36 H 0 1 N N N 26.055 10.590 -22.823 -0.435 6.037 1.804 H36 K9J 73 K9J H37 H37 H 0 1 N N N 26.948 6.327 -18.611 -0.330 5.412 -2.484 H37 K9J 74 K9J H38 H38 H 0 1 N N N 25.229 6.840 -18.510 1.331 4.902 -2.868 H38 K9J 75 K9J H39 H39 H 0 1 N N N 25.652 5.253 -19.239 0.019 3.700 -2.825 H39 K9J 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal K9J O31 C19 SING N N 1 K9J C19 C18 DOUB Y N 2 K9J C19 C20 SING Y N 3 K9J C18 C17 SING Y N 4 K9J C20 C21 DOUB Y N 5 K9J C1 N2 SING N N 6 K9J C1 C6 SING N N 7 K9J C17 N2 SING N N 8 K9J C17 C22 DOUB Y N 9 K9J C21 C22 SING Y N 10 K9J C21 C27 SING Y N 11 K9J N2 C3 SING N N 12 K9J C6 C5 SING N N 13 K9J C22 C30 SING Y N 14 K9J C3 C4 SING N N 15 K9J C27 C28 DOUB Y N 16 K9J C5 C4 DOUB Y N 17 K9J C5 C10 SING Y N 18 K9J C4 N7 SING Y N 19 K9J N11 C10 SING N N 20 K9J N11 C12 SING N N 21 K9J N11 C16 SING N N 22 K9J C10 N9 DOUB Y N 23 K9J C13 C12 SING N N 24 K9J C13 N14 SING N N 25 K9J N7 C8 DOUB Y N 26 K9J C36 N35 SING N N 27 K9J C30 C29 DOUB Y N 28 K9J C16 C15 SING N N 29 K9J C28 C29 SING Y N 30 K9J C37 N35 SING N N 31 K9J N9 C8 SING Y N 32 K9J N35 C34 SING N N 33 K9J C8 O32 SING N N 34 K9J C24 C23 SING N N 35 K9J C24 C26 SING N N 36 K9J N14 C15 SING N N 37 K9J N14 C23 SING N N 38 K9J O32 C33 SING N N 39 K9J C23 O25 DOUB N N 40 K9J C33 C34 SING N N 41 K9J C33 C38 SING N N 42 K9J C18 H1 SING N N 43 K9J C13 H2 SING N N 44 K9J C13 H3 SING N N 45 K9J C12 H4 SING N N 46 K9J C12 H5 SING N N 47 K9J C16 H6 SING N N 48 K9J C16 H7 SING N N 49 K9J C15 H8 SING N N 50 K9J C15 H9 SING N N 51 K9J C6 H10 SING N N 52 K9J C6 H11 SING N N 53 K9J C1 H12 SING N N 54 K9J C1 H13 SING N N 55 K9J C20 H14 SING N N 56 K9J C3 H15 SING N N 57 K9J C3 H16 SING N N 58 K9J C24 H17 SING N N 59 K9J C24 H18 SING N N 60 K9J C26 H19 SING N N 61 K9J C26 H20 SING N N 62 K9J C26 H21 SING N N 63 K9J C27 H22 SING N N 64 K9J C28 H23 SING N N 65 K9J C29 H24 SING N N 66 K9J C30 H25 SING N N 67 K9J O31 H26 SING N N 68 K9J C33 H27 SING N N 69 K9J C34 H28 SING N N 70 K9J C34 H29 SING N N 71 K9J C36 H31 SING N N 72 K9J C36 H32 SING N N 73 K9J C36 H33 SING N N 74 K9J C37 H34 SING N N 75 K9J C37 H35 SING N N 76 K9J C37 H36 SING N N 77 K9J C38 H37 SING N N 78 K9J C38 H38 SING N N 79 K9J C38 H39 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor K9J SMILES ACDLabs 12.01 "c5c(N3Cc1c(c(nc(OC(CN(C)C)C)n1)N2CCN(CC2)C(=O)CC)CC3)c4ccccc4cc5O" K9J InChI InChI 1.03 "InChI=1S/C29H38N6O3/c1-5-27(37)33-12-14-34(15-13-33)28-24-10-11-35(26-17-22(36)16-21-8-6-7-9-23(21)26)19-25(24)30-29(31-28)38-20(2)18-32(3)4/h6-9,16-17,20,36H,5,10-15,18-19H2,1-4H3/t20-/m1/s1" K9J InChIKey InChI 1.03 XWVXFKORKNADOR-HXUWFJFHSA-N K9J SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N1CCN(CC1)c2nc(O[C@H](C)CN(C)C)nc3CN(CCc23)c4cc(O)cc5ccccc45" K9J SMILES CACTVS 3.385 "CCC(=O)N1CCN(CC1)c2nc(O[CH](C)CN(C)C)nc3CN(CCc23)c4cc(O)cc5ccccc45" K9J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCC(=O)N1CCN(CC1)c2c3c(nc(n2)O[C@H](C)CN(C)C)CN(CC3)c4cc(cc5c4cccc5)O" K9J SMILES "OpenEye OEToolkits" 2.0.6 "CCC(=O)N1CCN(CC1)c2c3c(nc(n2)OC(C)CN(C)C)CN(CC3)c4cc(cc5c4cccc5)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier K9J "SYSTEMATIC NAME" ACDLabs 12.01 "1-{4-[2-{[(2R)-1-(dimethylamino)propan-2-yl]oxy}-7-(3-hydroxynaphthalen-1-yl)-5,6,7,8-tetrahydropyrido[3,4-d]pyrimidin-4-yl]piperazin-1-yl}propan-1-one" K9J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1-[4-[2-[(2~{R})-1-(dimethylamino)propan-2-yl]oxy-7-(3-oxidanylnaphthalen-1-yl)-6,8-dihydro-5~{H}-pyrido[3,4-d]pyrimidin-4-yl]piperazin-1-yl]propan-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site K9J "Create component" 2018-11-14 RCSB K9J "Initial release" 2018-12-12 RCSB #