data_KBA # _chem_comp.id KBA _chem_comp.name "2-(1H-1,2,3-triazol-1-yl)ethyl 6-deoxy-alpha-L-galactopyranoside" _chem_comp.type L-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C10 H17 N3 O5" _chem_comp.mon_nstd_parent_comp_id FUC _chem_comp.pdbx_synonyms ;(2~{S},3~{S},4~{R},5~{S},6~{R})-2-methyl-6-[2-(1,2,3-triazol-1-yl)ethoxy]oxane-3,4,5-triol; 2-(1H-1,2,3-triazol-1-yl)ethyl 6-deoxy-alpha-L-galactoside; 2-(1H-1,2,3-triazol-1-yl)ethyl 6-deoxy-L-galactoside; 2-(1H-1,2,3-triazol-1-yl)ethyl 6-deoxy-galactoside ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-06-28 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 259.259 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KBA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6GY9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 KBA "(2~{S},3~{S},4~{R},5~{S},6~{R})-2-methyl-6-[2-(1,2,3-triazol-1-yl)ethoxy]oxane-3,4,5-triol" PDB ? 2 KBA "2-(1H-1,2,3-triazol-1-yl)ethyl 6-deoxy-alpha-L-galactoside" PDB ? 3 KBA "2-(1H-1,2,3-triazol-1-yl)ethyl 6-deoxy-L-galactoside" PDB ? 4 KBA "2-(1H-1,2,3-triazol-1-yl)ethyl 6-deoxy-galactoside" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KBA C04 C04 C 0 1 N N N 1.617 5.347 43.231 -1.246 -0.373 0.356 C04 KBA 1 KBA C05 C05 C 0 1 N N N 1.120 5.805 44.607 -2.234 -0.720 -0.760 C05 KBA 2 KBA C06 C06 C 0 1 Y N N 1.073 8.363 45.011 -4.362 0.562 -1.119 C06 KBA 3 KBA C07 C07 C 0 1 Y N N 1.900 9.276 45.559 -5.501 0.725 -0.406 C07 KBA 4 KBA C1 C1 C 0 1 N N R 2.623 6.594 41.203 1.064 -0.547 0.971 C1 KBA 5 KBA C2 C2 C 0 1 N N S 2.305 7.645 40.161 2.390 -1.177 0.535 C2 KBA 6 KBA C3 C3 C 0 1 N N R 2.247 9.004 40.850 2.839 -0.541 -0.784 C3 KBA 7 KBA C4 C4 C 0 1 N N S 3.539 9.308 41.611 2.951 0.975 -0.595 C4 KBA 8 KBA C5 C5 C 0 1 N N S 3.979 8.130 42.500 1.604 1.522 -0.116 C5 KBA 9 KBA C6 C6 C 0 1 N N N 5.423 8.283 42.979 1.724 3.027 0.132 C6 KBA 10 KBA N01 N01 N 0 1 Y N N 1.676 7.100 45.091 -3.573 -0.258 -0.387 N01 KBA 11 KBA N02 N02 N 0 1 Y N N 3.053 8.650 46.000 -5.355 0.007 0.713 N02 KBA 12 KBA N03 N03 N 0 1 Y N N 2.980 7.245 45.731 -4.202 -0.564 0.694 N03 KBA 13 KBA O1 O03 O 0 1 N N N 1.752 6.444 42.332 0.061 -0.823 -0.008 O1 KBA 14 KBA O2 O2 O 0 1 N N N 1.052 7.285 39.585 2.212 -2.583 0.351 O2 KBA 15 KBA O3 O3 O 0 1 N N N 1.952 10.051 39.924 4.112 -1.071 -1.161 O3 KBA 16 KBA O4 O4 O 0 1 N N N 4.604 9.625 40.709 3.957 1.262 0.378 O4 KBA 17 KBA O5 O5 O 0 1 N N N 3.886 6.873 41.821 1.230 0.867 1.098 O5 KBA 18 KBA H1A H1 H 0 1 N N N 0.897 4.628 42.812 -1.230 0.707 0.504 H1A KBA 19 KBA H2A H2 H 0 1 N N N 2.596 4.859 43.349 -1.554 -0.862 1.280 H2A KBA 20 KBA H3A H3 H 0 1 N N N 0.026 5.904 44.557 -1.925 -0.230 -1.684 H3A KBA 21 KBA H4A H4 H 0 1 N N N 1.385 5.028 45.339 -2.250 -1.799 -0.908 H4A KBA 22 KBA H5A H5 H 0 1 N N N 0.104 8.571 44.581 -4.131 0.995 -2.081 H5A KBA 23 KBA H6 H6 H 0 1 N N N 1.694 10.333 45.641 -6.359 1.319 -0.685 H6 KBA 24 KBA H1 H7 H 0 1 N N N 2.694 5.626 40.685 0.761 -0.965 1.930 H1 KBA 25 KBA H2 H8 H 0 1 N N N 3.097 7.657 39.397 3.145 -1.002 1.301 H2 KBA 26 KBA H3 H9 H 0 1 N N N 1.436 8.958 41.592 2.108 -0.759 -1.562 H3 KBA 27 KBA H4 H10 H 0 1 N N N 3.351 10.171 42.266 3.217 1.441 -1.544 H4 KBA 28 KBA H5 H11 H 0 1 N N N 3.327 8.113 43.386 0.846 1.339 -0.877 H5 KBA 29 KBA H61 H12 H 0 1 N N N 5.694 7.423 43.608 2.010 3.526 -0.793 H61 KBA 30 KBA H62 H13 H 0 1 N N N 6.095 8.327 42.109 0.765 3.417 0.474 H62 KBA 31 KBA H63 H14 H 0 1 N N N 5.519 9.210 43.564 2.482 3.210 0.894 H63 KBA 32 KBA HO2 H15 H 0 1 N Y N 1.128 6.435 39.167 1.927 -3.051 1.148 HO2 KBA 33 KBA HO3 H16 H 0 1 N Y N 1.923 10.882 40.384 4.116 -2.029 -1.291 HO3 KBA 34 KBA HO4 H17 H 0 1 N Y N 5.394 9.810 41.203 4.082 2.206 0.548 HO4 KBA 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KBA O2 C2 SING N N 1 KBA O3 C3 SING N N 2 KBA C2 C3 SING N N 3 KBA C2 C1 SING N N 4 KBA O4 C4 SING N N 5 KBA C3 C4 SING N N 6 KBA C1 O5 SING N N 7 KBA C1 O1 SING N N 8 KBA C4 C5 SING N N 9 KBA O5 C5 SING N N 10 KBA O1 C04 SING N N 11 KBA C5 C6 SING N N 12 KBA C04 C05 SING N N 13 KBA C05 N01 SING N N 14 KBA C06 N01 SING Y N 15 KBA C06 C07 DOUB Y N 16 KBA N01 N03 SING Y N 17 KBA C07 N02 SING Y N 18 KBA N03 N02 DOUB Y N 19 KBA C04 H1A SING N N 20 KBA C04 H2A SING N N 21 KBA C05 H3A SING N N 22 KBA C05 H4A SING N N 23 KBA C06 H5A SING N N 24 KBA C07 H6 SING N N 25 KBA C1 H1 SING N N 26 KBA C2 H2 SING N N 27 KBA C3 H3 SING N N 28 KBA C4 H4 SING N N 29 KBA C5 H5 SING N N 30 KBA C6 H61 SING N N 31 KBA C6 H62 SING N N 32 KBA C6 H63 SING N N 33 KBA O2 HO2 SING N N 34 KBA O3 HO3 SING N N 35 KBA O4 HO4 SING N N 36 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KBA InChI InChI 1.03 "InChI=1S/C10H17N3O5/c1-6-7(14)8(15)9(16)10(18-6)17-5-4-13-3-2-11-12-13/h2-3,6-10,14-16H,4-5H2,1H3/t6-,7+,8+,9-,10+/m0/s1" KBA InChIKey InChI 1.03 AQLGVIQGWAYMPY-LOLPMWEVSA-N KBA SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1O[C@@H](OCCn2ccnn2)[C@@H](O)[C@H](O)[C@@H]1O" KBA SMILES CACTVS 3.385 "C[CH]1O[CH](OCCn2ccnn2)[CH](O)[CH](O)[CH]1O" KBA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)OCCn2ccnn2)O)O)O" KBA SMILES "OpenEye OEToolkits" 2.0.6 "CC1C(C(C(C(O1)OCCn2ccnn2)O)O)O" # _pdbx_chem_comp_identifier.comp_id KBA _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S},4~{R},5~{S},6~{R})-2-methyl-6-[2-(1,2,3-triazol-1-yl)ethoxy]oxane-3,4,5-triol" # _pdbx_chem_comp_related.comp_id KBA _pdbx_chem_comp_related.related_comp_id FUC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 KBA C1 FUC C1 "Carbohydrate core" 2 KBA C2 FUC C2 "Carbohydrate core" 3 KBA C3 FUC C3 "Carbohydrate core" 4 KBA C4 FUC C4 "Carbohydrate core" 5 KBA C5 FUC C5 "Carbohydrate core" 6 KBA C6 FUC C6 "Carbohydrate core" 7 KBA O1 FUC O1 "Carbohydrate core" 8 KBA O2 FUC O2 "Carbohydrate core" 9 KBA O3 FUC O3 "Carbohydrate core" 10 KBA O4 FUC O4 "Carbohydrate core" 11 KBA O5 FUC O5 "Carbohydrate core" 12 KBA H4 FUC H4 "Carbohydrate core" 13 KBA H5 FUC H5 "Carbohydrate core" 14 KBA H61 FUC H61 "Carbohydrate core" 15 KBA H62 FUC H62 "Carbohydrate core" 16 KBA H63 FUC H63 "Carbohydrate core" 17 KBA HO2 FUC HO2 "Carbohydrate core" 18 KBA HO3 FUC HO3 "Carbohydrate core" 19 KBA HO4 FUC HO4 "Carbohydrate core" 20 KBA H1 FUC H1 "Carbohydrate core" 21 KBA H2 FUC H2 "Carbohydrate core" 22 KBA H3 FUC H3 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support KBA "CARBOHYDRATE ISOMER" L PDB ? KBA "CARBOHYDRATE RING" pyranose PDB ? KBA "CARBOHYDRATE ANOMER" alpha PDB ? KBA "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KBA "Create component" 2018-06-28 EBI KBA "Initial release" 2018-08-22 RCSB KBA "Other modification" 2020-07-03 RCSB KBA "Modify parent residue" 2020-07-17 RCSB KBA "Modify name" 2020-07-17 RCSB KBA "Modify synonyms" 2020-07-17 RCSB KBA "Modify internal type" 2020-07-17 RCSB KBA "Modify linking type" 2020-07-17 RCSB KBA "Modify atom id" 2020-07-17 RCSB KBA "Modify component atom id" 2020-07-17 RCSB KBA "Modify leaving atom flag" 2020-07-17 RCSB ##