data_KDI
#
_chem_comp.id KDI
_chem_comp.name "3-AMINO-N-(3-METHOXYPROPYL)-6-{4-[(4-METHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}PYRAZINE-2-CARBOXAMIDE"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H28 N6 O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-12-15
_chem_comp.pdbx_modified_date 2014-09-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 448.539
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KDI
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4ACH
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KDI C1 C1 C 0 1 N N N 28.025 67.497 78.120 -4.779 -1.957 -3.836 C1 KDI 1
KDI N2 N2 N 0 1 N N N 28.172 66.036 78.042 -5.120 -1.792 -2.417 N2 KDI 2
KDI C3 C3 C 0 1 N N N 27.115 65.443 77.211 -5.282 -0.372 -2.076 C3 KDI 3
KDI C4 C4 C 0 1 N N N 28.203 65.426 79.382 -4.119 -2.436 -1.557 C4 KDI 4
KDI C5 C5 C 0 1 N N N 28.674 63.969 79.232 -4.602 -2.400 -0.102 C5 KDI 5
KDI N6 N6 N 0 1 N N N 27.908 63.237 78.180 -4.921 -1.009 0.250 N6 KDI 6
KDI S7 S7 S 0 1 N N N 27.643 61.597 78.370 -4.295 -0.312 1.615 S7 KDI 7
KDI O8 O8 O 0 1 N N N 28.564 61.110 79.354 -5.174 0.749 1.963 O8 KDI 8
KDI O9 O9 O 0 1 N N N 27.539 61.029 77.073 -3.976 -1.378 2.499 O9 KDI 9
KDI C10 C10 C 0 1 Y N N 26.049 61.498 79.146 -2.765 0.437 1.165 C10 KDI 10
KDI C11 C11 C 0 1 Y N N 24.865 61.703 78.419 -2.742 1.750 0.731 C11 KDI 11
KDI C12 C12 C 0 1 Y N N 23.623 61.664 79.051 -1.546 2.341 0.377 C12 KDI 12
KDI C13 C13 C 0 1 Y N N 23.571 61.458 80.438 -0.361 1.613 0.457 C13 KDI 13
KDI C14 C14 C 0 1 Y N N 24.759 61.232 81.157 -0.390 0.290 0.895 C14 KDI 14
KDI C15 C15 C 0 1 Y N N 25.984 61.279 80.524 -1.591 -0.290 1.251 C15 KDI 15
KDI C16 C16 C 0 1 Y N N 22.281 61.388 81.183 0.927 2.243 0.078 C16 KDI 16
KDI C17 C17 C 0 1 Y N N 22.055 62.266 82.267 0.968 3.600 -0.260 C17 KDI 17
KDI N18 N18 N 0 1 Y N N 20.932 62.164 82.963 2.110 4.165 -0.598 N18 KDI 18
KDI C19 C19 C 0 1 Y N N 20.021 61.217 82.664 3.229 3.447 -0.618 C19 KDI 19
KDI C20 C20 C 0 1 Y N N 20.230 60.315 81.601 3.192 2.085 -0.279 C20 KDI 20
KDI N21 N21 N 0 1 Y N N 21.381 60.431 80.911 2.039 1.521 0.065 N21 KDI 21
KDI C22 C22 C 0 1 N N N 19.234 59.267 81.235 4.432 1.282 -0.300 C22 KDI 22
KDI O23 O23 O 0 1 N N N 18.501 58.748 82.068 5.501 1.821 -0.511 O23 KDI 23
KDI N24 N24 N 0 1 N N N 19.167 58.949 79.921 4.378 -0.047 -0.085 N24 KDI 24
KDI C25 C25 C 0 1 N N N 18.324 57.926 79.286 5.608 -0.843 -0.105 C25 KDI 25
KDI C27 C27 C 0 1 N N N 22.627 57.774 79.024 7.376 -5.379 0.398 C27 KDI 26
KDI C30 C30 C 0 1 N N N 19.227 56.924 78.546 5.270 -2.311 0.165 C30 KDI 27
KDI N31 N31 N 0 1 N N N 18.871 61.167 83.425 4.426 4.040 -0.973 N31 KDI 28
KDI C6 C6 C 0 1 N N N 27.371 63.939 76.975 -5.812 -0.252 -0.643 C6 KDI 29
KDI C28 C28 C 0 1 N N N 20.459 57.569 77.873 6.555 -3.142 0.143 C28 KDI 30
KDI O29 O29 O 0 1 N N N 21.664 56.940 78.357 6.240 -4.512 0.396 O29 KDI 31
KDI H11C H11C H 0 0 N N N 28.827 67.914 78.747 -3.844 -1.438 -4.048 H11C KDI 32
KDI H12C H12C H 0 0 N N N 28.089 67.926 77.109 -4.665 -3.017 -4.062 H12C KDI 33
KDI H13C H13C H 0 0 N N N 27.049 67.744 78.562 -5.574 -1.538 -4.453 H13C KDI 34
KDI H31C H31C H 0 0 N N N 26.147 65.567 77.718 -4.319 0.132 -2.151 H31C KDI 35
KDI H32C H32C H 0 0 N N N 27.089 65.960 76.240 -5.989 0.089 -2.765 H32C KDI 36
KDI H41C H41C H 0 0 N N N 28.901 65.979 80.028 -3.983 -3.471 -1.869 H41C KDI 37
KDI H42C H42C H 0 0 N N N 27.197 65.449 79.826 -3.172 -1.903 -1.639 H42C KDI 38
KDI H61C H61C H 0 0 N N N 26.422 63.464 76.688 -5.826 0.796 -0.345 H61C KDI 39
KDI H62C H62C H 0 0 N N N 28.097 63.832 76.156 -6.820 -0.664 -0.590 H62C KDI 40
KDI H51C H51C H 0 0 N N N 29.740 63.967 78.961 -5.493 -3.019 0.003 H51C KDI 41
KDI H52C H52C H 0 0 N N N 28.539 63.452 80.193 -3.815 -2.773 0.554 H52C KDI 42
KDI H11 H11 H 0 1 N N N 24.917 61.893 77.357 -3.661 2.313 0.669 H11 KDI 43
KDI H15 H15 H 0 1 N N N 26.892 61.147 81.094 -1.615 -1.314 1.594 H15 KDI 44
KDI H12 H12 H 0 1 N N N 22.714 61.790 78.481 -1.529 3.367 0.039 H12 KDI 45
KDI H14 H14 H 0 1 N N N 24.712 61.020 82.215 0.525 -0.280 0.958 H14 KDI 46
KDI H17 H17 H 0 1 N N N 22.791 63.013 82.526 0.061 4.186 -0.245 H17 KDI 47
KDI H311 H311 H 0 0 N N N 18.899 61.886 84.120 4.438 4.959 -1.283 H311 KDI 48
KDI H312 H312 H 0 0 N N N 18.075 61.304 82.835 5.253 3.537 -0.913 H312 KDI 49
KDI H24 H24 H 0 1 N N N 19.761 59.472 79.310 3.525 -0.477 0.084 H24 KDI 50
KDI H251 H251 H 0 0 N N N 17.741 57.399 80.055 6.082 -0.753 -1.083 H251 KDI 51
KDI H252 H252 H 0 0 N N N 17.639 58.404 78.570 6.289 -0.479 0.664 H252 KDI 52
KDI H301 H301 H 0 0 N N N 19.580 56.176 79.271 4.796 -2.400 1.142 H301 KDI 53
KDI H302 H302 H 0 0 N N N 18.628 56.427 77.768 4.589 -2.674 -0.604 H302 KDI 54
KDI H271 H271 H 0 0 N N N 23.488 57.164 79.336 7.052 -6.401 0.596 H271 KDI 55
KDI H272 H272 H 0 0 N N N 22.967 58.563 78.337 7.867 -5.336 -0.574 H272 KDI 56
KDI H273 H273 H 0 0 N N N 22.163 58.233 79.909 8.074 -5.062 1.172 H273 KDI 57
KDI H281 H281 H 0 0 N N N 20.391 57.438 76.783 7.029 -3.052 -0.834 H281 KDI 58
KDI H282 H282 H 0 0 N N N 20.486 58.642 78.112 7.236 -2.778 0.913 H282 KDI 59
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KDI C1 N2 SING N N 1
KDI N2 C3 SING N N 2
KDI N2 C4 SING N N 3
KDI C3 C6 SING N N 4
KDI C4 C5 SING N N 5
KDI C5 N6 SING N N 6
KDI N6 S7 SING N N 7
KDI N6 C6 SING N N 8
KDI S7 O8 DOUB N N 9
KDI S7 O9 DOUB N N 10
KDI S7 C10 SING N N 11
KDI C10 C11 SING Y N 12
KDI C10 C15 DOUB Y N 13
KDI C11 C12 DOUB Y N 14
KDI C12 C13 SING Y N 15
KDI C13 C14 DOUB Y N 16
KDI C13 C16 SING N N 17
KDI C14 C15 SING Y N 18
KDI C16 C17 SING Y N 19
KDI C16 N21 DOUB Y N 20
KDI C17 N18 DOUB Y N 21
KDI N18 C19 SING Y N 22
KDI C19 C20 DOUB Y N 23
KDI C19 N31 SING N N 24
KDI C20 N21 SING Y N 25
KDI C20 C22 SING N N 26
KDI C22 O23 DOUB N N 27
KDI C22 N24 SING N N 28
KDI N24 C25 SING N N 29
KDI C25 C30 SING N N 30
KDI C27 O29 SING N N 31
KDI C30 C28 SING N N 32
KDI C28 O29 SING N N 33
KDI C1 H11C SING N N 34
KDI C1 H12C SING N N 35
KDI C1 H13C SING N N 36
KDI C3 H31C SING N N 37
KDI C3 H32C SING N N 38
KDI C4 H41C SING N N 39
KDI C4 H42C SING N N 40
KDI C6 H61C SING N N 41
KDI C6 H62C SING N N 42
KDI C5 H51C SING N N 43
KDI C5 H52C SING N N 44
KDI C11 H11 SING N N 45
KDI C15 H15 SING N N 46
KDI C12 H12 SING N N 47
KDI C14 H14 SING N N 48
KDI C17 H17 SING N N 49
KDI N31 H311 SING N N 50
KDI N31 H312 SING N N 51
KDI N24 H24 SING N N 52
KDI C25 H251 SING N N 53
KDI C25 H252 SING N N 54
KDI C30 H301 SING N N 55
KDI C30 H302 SING N N 56
KDI C27 H271 SING N N 57
KDI C27 H272 SING N N 58
KDI C27 H273 SING N N 59
KDI C28 H281 SING N N 60
KDI C28 H282 SING N N 61
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KDI SMILES ACDLabs 12.01 "O=S(=O)(c2ccc(c1nc(C(=O)NCCCOC)c(nc1)N)cc2)N3CCN(C)CC3"
KDI InChI InChI 1.03 "InChI=1S/C20H28N6O4S/c1-25-9-11-26(12-10-25)31(28,29)16-6-4-15(5-7-16)17-14-23-19(21)18(24-17)20(27)22-8-3-13-30-2/h4-7,14H,3,8-13H2,1-2H3,(H2,21,23)(H,22,27)"
KDI InChIKey InChI 1.03 YVGRIAWEROZMPD-UHFFFAOYSA-N
KDI SMILES_CANONICAL CACTVS 3.385 "COCCCNC(=O)c1nc(cnc1N)c2ccc(cc2)[S](=O)(=O)N3CCN(C)CC3"
KDI SMILES CACTVS 3.385 "COCCCNC(=O)c1nc(cnc1N)c2ccc(cc2)[S](=O)(=O)N3CCN(C)CC3"
KDI SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CN1CCN(CC1)S(=O)(=O)c2ccc(cc2)c3cnc(c(n3)C(=O)NCCCOC)N"
KDI SMILES "OpenEye OEToolkits" 1.9.2 "CN1CCN(CC1)S(=O)(=O)c2ccc(cc2)c3cnc(c(n3)C(=O)NCCCOC)N"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
KDI "SYSTEMATIC NAME" ACDLabs 12.01 "3-amino-N-(3-methoxypropyl)-6-{4-[(4-methylpiperazin-1-yl)sulfonyl]phenyl}pyrazine-2-carboxamide"
KDI "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "3-azanyl-N-(3-methoxypropyl)-6-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]pyrazine-2-carboxamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KDI "Create component" 2011-12-15 EBI
KDI "Modify descriptor" 2014-09-05 RCSB
#