data_KE5 # _chem_comp.id KE5 _chem_comp.name "(3~{S},6~{S})-3-[(4-hydroxyphenyl)methyl]-6-[(2-methyl-4-oxidanyl-phenyl)methyl]piperazine-2,5-dione" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H20 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-05-15 _chem_comp.pdbx_modified_date 2020-04-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 340.373 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KE5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6RQ1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KE5 CAB C1 C 0 1 N N S -5.954 18.766 5.112 1.312 0.641 1.234 CAB KE5 1 KE5 CAX C2 C 0 1 N N N -10.972 14.800 3.984 -2.106 1.659 -0.784 CAX KE5 2 KE5 CA C3 C 0 1 N N N -6.743 16.865 3.869 0.242 -1.567 1.284 CA KE5 3 KE5 CB C4 C 0 1 N N N -7.273 18.886 5.744 -0.056 1.179 1.523 CB KE5 4 KE5 NB N1 N 0 1 N N N -5.837 17.720 4.162 1.344 -0.812 1.343 NB KE5 5 KE5 OB O1 O 0 1 N N N -7.385 19.635 6.659 -0.169 2.348 1.827 OB KE5 6 KE5 CD1 C5 C 0 1 Y N N -11.005 18.522 3.328 -4.008 -1.589 -0.474 CD1 KE5 7 KE5 CD2 C6 C 0 1 Y N N -11.498 16.255 3.827 -3.238 0.666 -0.729 CD2 KE5 8 KE5 CD3 C7 C 0 1 Y N N -7.690 20.908 3.473 4.186 1.470 -0.144 CD3 KE5 9 KE5 CE1 C8 C 0 1 Y N N -12.308 18.855 3.550 -5.314 -1.163 -0.626 CE1 KE5 10 KE5 CE2 C9 C 0 1 Y N N -12.829 16.554 4.031 -4.542 1.096 -0.882 CE2 KE5 11 KE5 CE3 C10 C 0 1 Y N N -8.636 21.121 2.507 5.490 1.076 -0.373 CE3 KE5 12 KE5 CAA C11 C 0 1 N N S -8.142 17.021 4.408 -1.128 -0.988 1.103 CAA KE5 13 KE5 CBA C12 C 0 1 N N N -9.124 16.998 3.224 -1.549 -1.143 -0.359 CBA KE5 14 KE5 CBB C13 C 0 1 N N N -5.652 20.038 4.358 1.720 1.044 -0.184 CBB KE5 15 KE5 CD4 C14 C 0 1 Y N N -6.360 19.635 1.938 3.399 -0.637 -0.970 CD4 KE5 16 KE5 CE4 C15 C 0 1 Y N N -7.322 19.872 0.931 4.701 -1.034 -1.205 CE4 KE5 17 KE5 CGA C16 C 0 1 Y N N -10.600 17.241 3.500 -2.972 -0.676 -0.526 CGA KE5 18 KE5 CGB C17 C 0 1 Y N N -6.575 20.164 3.201 3.142 0.614 -0.440 CGB KE5 19 KE5 CZA C18 C 0 1 Y N N -13.211 17.878 3.875 -5.584 0.182 -0.831 CZA KE5 20 KE5 CZB C19 C 0 1 Y N N -8.459 20.599 1.248 5.751 -0.179 -0.904 CZB KE5 21 KE5 NA N2 N 0 1 N N N -8.280 18.207 5.234 -1.158 0.424 1.460 NA KE5 22 KE5 OA O2 O 0 1 N N N -6.444 15.958 3.148 0.357 -2.770 1.382 OA KE5 23 KE5 OHA O3 O 0 1 N N N -14.458 18.261 4.081 -6.867 0.603 -0.981 OHA KE5 24 KE5 OHB O4 O 0 1 N N N -9.416 20.881 0.401 7.033 -0.567 -1.135 OHB KE5 25 KE5 H1 H1 H 0 1 N N N -5.193 18.639 5.896 2.021 1.067 1.944 H1 KE5 26 KE5 H2 H2 H 0 1 N N N -10.663 14.632 5.026 -1.906 2.037 0.219 H2 KE5 27 KE5 H3 H3 H 0 1 N N N -11.770 14.091 3.720 -1.213 1.170 -1.172 H3 KE5 28 KE5 H4 H4 H 0 1 N N N -10.111 14.648 3.317 -2.380 2.487 -1.437 H4 KE5 29 KE5 H5 H5 H 0 1 N N N -4.966 17.643 3.676 2.201 -1.250 1.463 H5 KE5 30 KE5 H6 H6 H 0 1 N N N -10.298 19.277 3.016 -3.798 -2.636 -0.311 H6 KE5 31 KE5 H7 H7 H 0 1 N N N -7.825 21.331 4.458 3.983 2.447 0.270 H7 KE5 32 KE5 H8 H8 H 0 1 N N N -12.627 19.884 3.470 -6.123 -1.877 -0.587 H8 KE5 33 KE5 H9 H9 H 0 1 N N N -13.543 15.790 4.301 -4.750 2.144 -1.041 H9 KE5 34 KE5 H10 H10 H 0 1 N N N -9.520 21.698 2.734 6.306 1.743 -0.138 H10 KE5 35 KE5 H11 H11 H 0 1 N N N -8.360 16.140 5.029 -1.831 -1.530 1.735 H11 KE5 36 KE5 H12 H12 H 0 1 N N N -9.041 16.008 2.752 -0.893 -0.544 -0.992 H12 KE5 37 KE5 H13 H13 H 0 1 N N N -8.795 17.771 2.514 -1.474 -2.191 -0.650 H13 KE5 38 KE5 H14 H14 H 0 1 N N N -4.614 20.011 3.996 1.059 0.561 -0.904 H14 KE5 39 KE5 H15 H15 H 0 1 N N N -5.785 20.901 5.028 1.644 2.127 -0.290 H15 KE5 40 KE5 H16 H16 H 0 1 N N N -5.475 19.053 1.728 2.582 -1.304 -1.201 H16 KE5 41 KE5 H17 H17 H 0 1 N N N -7.174 19.493 -0.069 4.902 -2.012 -1.619 H17 KE5 42 KE5 H18 H18 H 0 1 N N N -9.205 18.532 5.430 -2.013 0.835 1.660 H18 KE5 43 KE5 H19 H19 H 0 1 N N N -14.990 17.505 4.298 -7.301 0.845 -0.152 H19 KE5 44 KE5 H20 H20 H 0 1 N N N -10.090 21.386 0.841 7.360 -0.340 -2.016 H20 KE5 45 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KE5 OHB CZB SING N N 1 KE5 CE4 CZB DOUB Y N 2 KE5 CE4 CD4 SING Y N 3 KE5 CZB CE3 SING Y N 4 KE5 CD4 CGB DOUB Y N 5 KE5 CE3 CD3 DOUB Y N 6 KE5 OA CA DOUB N N 7 KE5 CGB CD3 SING Y N 8 KE5 CGB CBB SING N N 9 KE5 CBA CGA SING N N 10 KE5 CBA CAA SING N N 11 KE5 CD1 CGA DOUB Y N 12 KE5 CD1 CE1 SING Y N 13 KE5 CGA CD2 SING Y N 14 KE5 CE1 CZA DOUB Y N 15 KE5 CD2 CAX SING N N 16 KE5 CD2 CE2 DOUB Y N 17 KE5 CA NB SING N N 18 KE5 CA CAA SING N N 19 KE5 CZA CE2 SING Y N 20 KE5 CZA OHA SING N N 21 KE5 NB CAB SING N N 22 KE5 CBB CAB SING N N 23 KE5 CAA NA SING N N 24 KE5 CAB CB SING N N 25 KE5 NA CB SING N N 26 KE5 CB OB DOUB N N 27 KE5 CAB H1 SING N N 28 KE5 CAX H2 SING N N 29 KE5 CAX H3 SING N N 30 KE5 CAX H4 SING N N 31 KE5 NB H5 SING N N 32 KE5 CD1 H6 SING N N 33 KE5 CD3 H7 SING N N 34 KE5 CE1 H8 SING N N 35 KE5 CE2 H9 SING N N 36 KE5 CE3 H10 SING N N 37 KE5 CAA H11 SING N N 38 KE5 CBA H12 SING N N 39 KE5 CBA H13 SING N N 40 KE5 CBB H14 SING N N 41 KE5 CBB H15 SING N N 42 KE5 CD4 H16 SING N N 43 KE5 CE4 H17 SING N N 44 KE5 NA H18 SING N N 45 KE5 OHA H19 SING N N 46 KE5 OHB H20 SING N N 47 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KE5 InChI InChI 1.03 "InChI=1S/C19H20N2O4/c1-11-8-15(23)7-4-13(11)10-17-19(25)20-16(18(24)21-17)9-12-2-5-14(22)6-3-12/h2-8,16-17,22-23H,9-10H2,1H3,(H,20,25)(H,21,24)/t16-,17-/m0/s1" KE5 InChIKey InChI 1.03 OLLRPTQZHVLIEA-IRXDYDNUSA-N KE5 SMILES_CANONICAL CACTVS 3.385 "Cc1cc(O)ccc1C[C@@H]2NC(=O)[C@H](Cc3ccc(O)cc3)NC2=O" KE5 SMILES CACTVS 3.385 "Cc1cc(O)ccc1C[CH]2NC(=O)[CH](Cc3ccc(O)cc3)NC2=O" KE5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1C[C@H]2C(=O)N[C@H](C(=O)N2)Cc3ccc(cc3)O)O" KE5 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1CC2C(=O)NC(C(=O)N2)Cc3ccc(cc3)O)O" # _pdbx_chem_comp_identifier.comp_id KE5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S},6~{S})-3-[(4-hydroxyphenyl)methyl]-6-[(2-methyl-4-oxidanyl-phenyl)methyl]piperazine-2,5-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KE5 "Create component" 2019-05-15 PDBE KE5 "Initial release" 2020-04-22 RCSB ##