data_KFN # _chem_comp.id KFN _chem_comp.name "2,6-anhydro-3-deoxy-D-glycero-D-galacto-non-2-enonic acid" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C9 H14 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(4S,5R,6R)-4,5-DIHYDROXY-6-[(1R,2R)-1,2,3-TRIHYDROXYPROPYL]-5,6-DIHYDRO-4H-PYRAN-2-CARBOXYLIC ACID" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-11-26 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 250.203 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KFN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2XZJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id KFN _pdbx_chem_comp_synonyms.name "(4S,5R,6R)-4,5-DIHYDROXY-6-[(1R,2R)-1,2,3-TRIHYDROXYPROPYL]-5,6-DIHYDRO-4H-PYRAN-2-CARBOXYLIC ACID" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KFN C1 C10 C 0 1 N N N 39.068 1.211 103.722 2.136 -2.246 0.092 C1 KFN 1 KFN C3 C2 C 0 1 N N N 37.747 3.290 104.348 2.556 0.090 -0.300 C3 KFN 2 KFN C4 C3 C 0 1 N N S 36.405 4.020 104.456 2.170 1.536 -0.456 C4 KFN 3 KFN C5 C4 C 0 1 N N R 35.260 3.003 104.611 0.783 1.762 0.156 C5 KFN 4 KFN C6 C5 C 0 1 N N R 35.358 1.949 103.503 -0.151 0.653 -0.347 C6 KFN 5 KFN C7 C6 C 0 1 N N R 34.350 0.807 103.600 -1.564 0.885 0.192 C7 KFN 6 KFN C8 C7 C 0 1 N N R 34.465 -0.129 102.384 -2.461 -0.287 -0.208 C8 KFN 7 KFN C9 C9 C 0 1 N N N 33.534 -1.330 102.528 -3.875 -0.055 0.330 C9 KFN 8 KFN O5 O4 O 0 1 N N N 34.032 3.711 104.479 0.280 3.037 -0.250 O5 KFN 9 KFN O1B O9 O 0 1 N N N 40.152 1.786 103.975 1.258 -3.232 0.363 O1B KFN 10 KFN O1A O8 O 0 1 N N N 38.948 0.046 103.280 3.314 -2.505 -0.052 O1A KFN 11 KFN O4 O3 O 0 1 N N N 36.382 5.045 105.475 3.126 2.359 0.214 O4 KFN 12 KFN O6 O5 O 0 1 N N N 36.633 1.259 103.560 0.345 -0.602 0.128 O6 KFN 13 KFN C2 C20 C 0 1 N N N 37.762 1.967 103.893 1.667 -0.855 -0.034 C2 KFN 14 KFN O7 O6 O 0 1 N N N 34.605 0.075 104.809 -1.520 0.987 1.616 O7 KFN 15 KFN O8 O7 O 0 1 N N N 34.144 0.548 101.159 -2.505 -0.389 -1.633 O8 KFN 16 KFN O9 O10 O 0 1 N N N 32.200 -0.841 102.514 -4.683 -1.202 0.058 O9 KFN 17 KFN HO1B H9 H 0 0 N N N 40.874 1.201 103.780 1.612 -4.129 0.432 HO1B KFN 18 KFN H3 H2 H 0 1 N N N 38.666 3.788 104.619 3.593 -0.188 -0.414 H3 KFN 19 KFN H4 H3 H 0 1 N N N 36.256 4.569 103.514 2.146 1.794 -1.514 H4 KFN 20 KFN H5 H4 H 0 1 N N N 35.318 2.502 105.588 0.850 1.722 1.243 H5 KFN 21 KFN HO4 HA H 0 1 N N N 36.377 4.639 106.334 4.028 2.267 -0.121 HO4 KFN 22 KFN H6 H5 H 0 1 N N N 35.188 2.541 102.591 -0.168 0.653 -1.437 H6 KFN 23 KFN HO5 HB H 0 1 N N N 33.663 3.869 105.340 0.833 3.782 0.020 HO5 KFN 24 KFN H7 H6 H 0 1 N N N 33.331 1.220 103.613 -1.965 1.809 -0.227 H7 KFN 25 KFN H8 H7 H 0 1 N N N 35.511 -0.466 102.348 -2.061 -1.211 0.210 H8 KFN 26 KFN HO7 HC H 0 1 N N N 34.661 -0.853 104.612 -1.173 0.199 2.057 HO7 KFN 27 KFN H91 H91C H 0 1 N N N 33.689 -2.031 101.695 -3.831 0.111 1.406 H91 KFN 28 KFN H92 H92C H 0 1 N N N 33.739 -1.867 103.466 -4.309 0.819 -0.155 H92 KFN 29 KFN HO8 HD H 0 1 N N N 34.073 1.481 101.322 -2.852 0.398 -2.073 HO8 KFN 30 KFN HO9 H10 H 0 1 N N N 31.893 -0.732 103.406 -5.594 -1.125 0.372 HO9 KFN 31 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KFN C1 O1B SING N N 1 KFN C1 O1A DOUB N N 2 KFN C1 C2 SING N N 3 KFN C3 C4 SING N N 4 KFN C3 C2 DOUB N N 5 KFN C4 C5 SING N N 6 KFN C4 O4 SING N N 7 KFN C5 C6 SING N N 8 KFN C5 O5 SING N N 9 KFN C6 C7 SING N N 10 KFN C6 O6 SING N N 11 KFN C7 C8 SING N N 12 KFN C7 O7 SING N N 13 KFN C8 C9 SING N N 14 KFN C8 O8 SING N N 15 KFN C9 O9 SING N N 16 KFN O6 C2 SING N N 17 KFN O1B HO1B SING N N 18 KFN C3 H3 SING N N 19 KFN C4 H4 SING N N 20 KFN C5 H5 SING N N 21 KFN O4 HO4 SING N N 22 KFN C6 H6 SING N N 23 KFN O5 HO5 SING N N 24 KFN C7 H7 SING N N 25 KFN C8 H8 SING N N 26 KFN O7 HO7 SING N N 27 KFN C9 H91 SING N N 28 KFN C9 H92 SING N N 29 KFN O8 HO8 SING N N 30 KFN O9 HO9 SING N N 31 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KFN SMILES_CANONICAL CACTVS 3.352 "OC[C@@H](O)[C@@H](O)[C@@H]1OC(=C[C@H](O)[C@H]1O)C(O)=O" KFN SMILES CACTVS 3.352 "OC[CH](O)[CH](O)[CH]1OC(=C[CH](O)[CH]1O)C(O)=O" KFN SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "C1=C(O[C@H]([C@@H]([C@H]1O)O)[C@@H]([C@@H](CO)O)O)C(=O)O" KFN SMILES "OpenEye OEToolkits" 1.6.1 "C1=C(OC(C(C1O)O)C(C(CO)O)O)C(=O)O" KFN InChI InChI 1.03 "InChI=1S/C9H14O8/c10-2-4(12)7(14)8-6(13)3(11)1-5(17-8)9(15)16/h1,3-4,6-8,10-14H,2H2,(H,15,16)/t3-,4+,6+,7+,8+/m0/s1" KFN InChIKey InChI 1.03 IZHMZNLAOQHCDZ-LRGKAINGSA-N # _pdbx_chem_comp_identifier.comp_id KFN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 1.6.1 _pdbx_chem_comp_identifier.identifier "(4S,5R,6R)-4,5-dihydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]-5,6-dihydro-4H-pyran-2-carboxylic acid" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support KFN "CARBOHYDRATE ISOMER" D PDB ? KFN "CARBOHYDRATE RING" dihydropyran PDB ? KFN "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KFN "Create component" 2010-11-26 EBI KFN "Modify descriptor" 2011-06-04 RCSB KFN "Other modification" 2020-07-03 RCSB KFN "Modify name" 2020-07-17 RCSB KFN "Modify synonyms" 2020-07-17 RCSB KFN "Modify linking type" 2020-07-17 RCSB KFN "Modify atom id" 2020-07-17 RCSB KFN "Modify component atom id" 2020-07-17 RCSB ##