data_KK4 # _chem_comp.id KK4 _chem_comp.name "3-[(1E)-1-{8-[(4-methyl-2-propyl-1H-benzimidazol-1-yl)methyl]dibenzo[b,e]oxepin-11(6H)-ylidene}ethyl]-1,2,4-oxadiazol-5(4H)-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H28 N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2018-08-10 _chem_comp.pdbx_modified_date 2018-11-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 492.568 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KK4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6AD9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KK4 O3 O1 O 0 1 N N N -15.513 4.965 11.939 -2.813 -5.191 0.809 O3 KK4 1 KK4 C29 C1 C 0 1 N N N -14.965 4.804 10.854 -3.044 -3.998 0.840 C29 KK4 2 KK4 O2 O2 O 0 1 N N N -15.527 4.220 9.741 -3.050 -3.208 1.925 O2 KK4 3 KK4 N3 N1 N 0 1 N N N -14.507 4.293 8.691 -3.317 -2.065 1.629 N3 KK4 4 KK4 N4 N2 N 0 1 N N N -13.706 5.197 10.523 -3.341 -3.201 -0.215 N4 KK4 5 KK4 C28 C2 C 0 1 N N N -13.504 4.885 9.245 -3.519 -1.940 0.345 C28 KK4 6 KK4 C27 C3 C 0 1 N N N -12.221 5.129 8.570 -3.862 -0.708 -0.368 C27 KK4 7 KK4 C30 C4 C 0 1 N N N -12.115 6.484 7.922 -5.201 -0.578 -1.048 C30 KK4 8 KK4 C1 C5 C 0 1 N N N -11.303 4.133 8.579 -2.972 0.318 -0.419 C1 KK4 9 KK4 C22 C6 C 0 1 Y N N -10.013 4.231 7.883 -3.381 1.606 -1.013 C22 KK4 10 KK4 C23 C7 C 0 1 Y N N -10.050 4.552 6.513 -3.815 1.704 -2.331 C23 KK4 11 KK4 C24 C8 C 0 1 Y N N -8.879 4.619 5.769 -4.209 2.935 -2.820 C24 KK4 12 KK4 C25 C9 C 0 1 Y N N -7.678 4.305 6.374 -4.171 4.052 -2.003 C25 KK4 13 KK4 C26 C10 C 0 1 Y N N -7.618 3.945 7.730 -3.732 3.958 -0.695 C26 KK4 14 KK4 C21 C11 C 0 1 Y N N -8.791 3.898 8.496 -3.327 2.728 -0.195 C21 KK4 15 KK4 O1 O3 O 0 1 N N N -8.549 3.564 9.793 -2.852 2.615 1.061 O1 KK4 16 KK4 C20 C12 C 0 1 N N N -9.573 3.430 10.772 -1.480 2.423 1.296 C20 KK4 17 KK4 C3 C13 C 0 1 Y N N -10.636 2.459 10.322 -0.951 1.073 0.891 C3 KK4 18 KK4 C2 C14 C 0 1 Y N N -11.487 2.807 9.249 -1.612 0.130 0.128 C2 KK4 19 KK4 C19 C15 C 0 1 Y N N -12.432 1.880 8.844 -0.983 -1.090 -0.167 C19 KK4 20 KK4 C18 C16 C 0 1 Y N N -12.592 0.651 9.480 0.283 -1.359 0.300 C18 KK4 21 KK4 C5 C17 C 0 1 Y N N -11.767 0.292 10.519 0.939 -0.414 1.069 C5 KK4 22 KK4 C4 C18 C 0 1 Y N N -10.773 1.202 10.929 0.333 0.779 1.351 C4 KK4 23 KK4 C6 C19 C 0 1 N N N -11.889 -1.032 11.225 2.325 -0.697 1.589 C6 KK4 24 KK4 N1 N3 N 0 1 Y N N -13.094 -1.789 10.920 3.316 -0.235 0.614 N1 KK4 25 KK4 C14 C20 C 0 1 Y N N -14.301 -1.787 11.580 3.880 1.002 0.563 C14 KK4 26 KK4 C15 C21 C 0 1 N N N -14.707 -1.036 12.799 3.577 2.129 1.516 C15 KK4 27 KK4 C16 C22 C 0 1 N N N -14.534 0.469 12.824 4.537 2.062 2.706 C16 KK4 28 KK4 C17 C23 C 0 1 N N N -15.413 1.136 11.805 4.230 3.206 3.674 C17 KK4 29 KK4 N2 N4 N 0 1 Y N N -15.126 -2.588 10.996 4.719 1.070 -0.429 N2 KK4 30 KK4 C8 C24 C 0 1 Y N N -14.443 -3.138 9.965 4.751 -0.119 -1.083 C8 KK4 31 KK4 C7 C25 C 0 1 Y N N -13.170 -2.661 9.887 3.855 -0.975 -0.419 C7 KK4 32 KK4 C12 C26 C 0 1 Y N N -12.272 -3.065 8.888 3.678 -2.275 -0.872 C12 KK4 33 KK4 C11 C27 C 0 1 Y N N -12.738 -3.998 7.942 4.383 -2.717 -1.971 C11 KK4 34 KK4 C10 C28 C 0 1 Y N N -14.042 -4.495 8.011 5.267 -1.872 -2.626 C10 KK4 35 KK4 C9 C29 C 0 1 Y N N -14.918 -4.079 9.045 5.458 -0.591 -2.191 C9 KK4 36 KK4 C13 C30 C 0 1 N N N -16.328 -4.580 9.153 6.421 0.315 -2.914 C13 KK4 37 KK4 H1 H1 H 0 1 N N N -13.049 5.641 11.132 -3.415 -3.453 -1.148 H1 KK4 38 KK4 H2 H2 H 0 1 N N N -13.039 7.052 8.105 -5.124 -0.936 -2.074 H2 KK4 39 KK4 H3 H3 H 0 1 N N N -11.260 7.028 8.349 -5.940 -1.173 -0.510 H3 KK4 40 KK4 H4 H4 H 0 1 N N N -11.968 6.362 6.839 -5.507 0.468 -1.049 H4 KK4 41 KK4 H5 H5 H 0 1 N N N -10.999 4.748 6.035 -3.842 0.829 -2.964 H5 KK4 42 KK4 H6 H6 H 0 1 N N N -8.907 4.913 4.730 -4.548 3.026 -3.841 H6 KK4 43 KK4 H7 H7 H 0 1 N N N -6.768 4.337 5.793 -4.487 5.009 -2.393 H7 KK4 44 KK4 H8 H8 H 0 1 N N N -6.668 3.704 8.183 -3.705 4.836 -0.067 H8 KK4 45 KK4 H9 H9 H 0 1 N N N -9.128 3.065 11.709 -0.927 3.188 0.751 H9 KK4 46 KK4 H10 H10 H 0 1 N N N -10.035 4.413 10.944 -1.292 2.558 2.361 H10 KK4 47 KK4 H11 H11 H 0 1 N N N -13.068 2.118 8.004 -1.498 -1.826 -0.767 H11 KK4 48 KK4 H12 H12 H 0 1 N N N -13.369 -0.024 9.154 0.761 -2.300 0.069 H12 KK4 49 KK4 H13 H13 H 0 1 N N N -10.102 0.926 11.728 0.858 1.506 1.952 H13 KK4 50 KK4 H14 H14 H 0 1 N N N -11.021 -1.647 10.946 2.473 -0.174 2.534 H14 KK4 51 KK4 H15 H15 H 0 1 N N N -11.871 -0.843 12.308 2.442 -1.770 1.745 H15 KK4 52 KK4 H16 H16 H 0 1 N N N -15.775 -1.241 12.963 3.701 3.083 1.003 H16 KK4 53 KK4 H17 H17 H 0 1 N N N -14.122 -1.442 13.638 2.551 2.039 1.872 H17 KK4 54 KK4 H18 H18 H 0 1 N N N -13.484 0.713 12.606 4.413 1.109 3.220 H18 KK4 55 KK4 H19 H19 H 0 1 N N N -14.797 0.843 13.824 5.563 2.153 2.351 H19 KK4 56 KK4 H20 H20 H 0 1 N N N -15.264 2.225 11.848 4.914 3.158 4.522 H20 KK4 57 KK4 H21 H21 H 0 1 N N N -15.153 0.770 10.801 4.354 4.160 3.161 H21 KK4 58 KK4 H22 H22 H 0 1 N N N -16.466 0.901 12.019 3.204 3.115 4.030 H22 KK4 59 KK4 H23 H23 H 0 1 N N N -11.265 -2.677 8.846 2.991 -2.937 -0.365 H23 KK4 60 KK4 H24 H24 H 0 1 N N N -12.080 -4.333 7.154 4.243 -3.727 -2.327 H24 KK4 61 KK4 H25 H25 H 0 1 N N N -14.385 -5.202 7.270 5.813 -2.232 -3.486 H25 KK4 62 KK4 H26 H26 H 0 1 N N N -16.351 -5.479 9.786 5.893 0.854 -3.700 H26 KK4 63 KK4 H27 H27 H 0 1 N N N -16.961 -3.800 9.602 6.848 1.028 -2.208 H27 KK4 64 KK4 H28 H28 H 0 1 N N N -16.707 -4.828 8.150 7.220 -0.281 -3.355 H28 KK4 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KK4 C24 C25 DOUB Y N 1 KK4 C24 C23 SING Y N 2 KK4 C25 C26 SING Y N 3 KK4 C23 C22 DOUB Y N 4 KK4 C26 C21 DOUB Y N 5 KK4 C22 C21 SING Y N 6 KK4 C22 C1 SING N N 7 KK4 C30 C27 SING N N 8 KK4 C11 C10 DOUB Y N 9 KK4 C11 C12 SING Y N 10 KK4 C10 C9 SING Y N 11 KK4 C21 O1 SING N N 12 KK4 C27 C1 DOUB N E 13 KK4 C27 C28 SING N N 14 KK4 C1 C2 SING N N 15 KK4 N3 C28 DOUB N N 16 KK4 N3 O2 SING N N 17 KK4 C19 C2 DOUB Y N 18 KK4 C19 C18 SING Y N 19 KK4 C12 C7 DOUB Y N 20 KK4 C9 C13 SING N N 21 KK4 C9 C8 DOUB Y N 22 KK4 C28 N4 SING N N 23 KK4 C2 C3 SING Y N 24 KK4 C18 C5 DOUB Y N 25 KK4 O2 C29 SING N N 26 KK4 O1 C20 SING N N 27 KK4 C7 C8 SING Y N 28 KK4 C7 N1 SING Y N 29 KK4 C8 N2 SING Y N 30 KK4 C3 C20 SING N N 31 KK4 C3 C4 DOUB Y N 32 KK4 C5 C4 SING Y N 33 KK4 C5 C6 SING N N 34 KK4 N4 C29 SING N N 35 KK4 C29 O3 DOUB N N 36 KK4 N1 C6 SING N N 37 KK4 N1 C14 SING Y N 38 KK4 N2 C14 DOUB Y N 39 KK4 C14 C15 SING N N 40 KK4 C17 C16 SING N N 41 KK4 C15 C16 SING N N 42 KK4 N4 H1 SING N N 43 KK4 C30 H2 SING N N 44 KK4 C30 H3 SING N N 45 KK4 C30 H4 SING N N 46 KK4 C23 H5 SING N N 47 KK4 C24 H6 SING N N 48 KK4 C25 H7 SING N N 49 KK4 C26 H8 SING N N 50 KK4 C20 H9 SING N N 51 KK4 C20 H10 SING N N 52 KK4 C19 H11 SING N N 53 KK4 C18 H12 SING N N 54 KK4 C4 H13 SING N N 55 KK4 C6 H14 SING N N 56 KK4 C6 H15 SING N N 57 KK4 C15 H16 SING N N 58 KK4 C15 H17 SING N N 59 KK4 C16 H18 SING N N 60 KK4 C16 H19 SING N N 61 KK4 C17 H20 SING N N 62 KK4 C17 H21 SING N N 63 KK4 C17 H22 SING N N 64 KK4 C12 H23 SING N N 65 KK4 C11 H24 SING N N 66 KK4 C10 H25 SING N N 67 KK4 C13 H26 SING N N 68 KK4 C13 H27 SING N N 69 KK4 C13 H28 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KK4 SMILES ACDLabs 12.01 "O=C1ON=C(N1)\C(=C2/c4c(COc3c2cccc3)cc(cc4)Cn5c(CCC)nc6c5cccc6C)C" KK4 InChI InChI 1.03 "InChI=1S/C30H28N4O3/c1-4-8-26-31-28-18(2)9-7-11-24(28)34(26)16-20-13-14-22-21(15-20)17-36-25-12-6-5-10-23(25)27(22)19(3)29-32-30(35)37-33-29/h5-7,9-15H,4,8,16-17H2,1-3H3,(H,32,33,35)/b27-19+" KK4 InChIKey InChI 1.03 KWALRLFFHWLMRU-ZXVVBBHZSA-N KK4 SMILES_CANONICAL CACTVS 3.385 "CCCc1nc2c(C)cccc2n1Cc3ccc4c(COc5ccccc5/C4=C(C)/C6=NOC(=O)N6)c3" KK4 SMILES CACTVS 3.385 "CCCc1nc2c(C)cccc2n1Cc3ccc4c(COc5ccccc5C4=C(C)C6=NOC(=O)N6)c3" KK4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCc1nc2c(cccc2n1Cc3ccc\4c(c3)COc5ccccc5/C4=C(\C)/C6=NOC(=O)N6)C" KK4 SMILES "OpenEye OEToolkits" 2.0.6 "CCCc1nc2c(cccc2n1Cc3ccc4c(c3)COc5ccccc5C4=C(C)C6=NOC(=O)N6)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier KK4 "SYSTEMATIC NAME" ACDLabs 12.01 "3-[(1E)-1-{8-[(4-methyl-2-propyl-1H-benzimidazol-1-yl)methyl]dibenzo[b,e]oxepin-11(6H)-ylidene}ethyl]-1,2,4-oxadiazol-5(4H)-one" KK4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "3-[(1~{E})-1-[8-[(4-methyl-2-propyl-benzimidazol-1-yl)methyl]-6~{H}-benzo[c][1]benzoxepin-11-ylidene]ethyl]-4~{H}-1,2,4-oxadiazol-5-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KK4 "Create component" 2018-08-10 PDBJ KK4 "Initial release" 2018-11-14 RCSB #