data_KLC
#
_chem_comp.id KLC
_chem_comp.name "(3~{S},4~{R},8~{S},10~{S},12~{S},14~{S})-14-[(~{Z},4~{R})-4-(hydroxymethyl)hex-2-en-2-yl]-4,12-dimethoxy-9,9-dimethyl-3,8,10-tris(oxidanyl)-1-oxacyclotetradecan-2-one"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H44 O8"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-05-30
_chem_comp.pdbx_modified_date 2022-12-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 460.601
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KLC
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8A0L
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KLC C4 C1 C 0 1 N N N -2.761 48.740 45.321 1.959 2.964 0.349 C4 KLC 1
KLC C14 C2 C 0 1 N N N 1.327 52.032 48.425 -0.552 -1.564 1.553 C14 KLC 2
KLC C5 C3 C 0 1 N N R -1.239 48.890 45.544 0.667 3.596 -0.163 C5 KLC 3
KLC C6 C4 C 0 1 N N N 0.826 50.246 45.159 -1.020 1.874 0.479 C6 KLC 4
KLC C11 C5 C 0 1 N N S -2.546 52.850 47.913 2.889 -2.205 0.010 C11 KLC 5
KLC C9 C6 C 0 1 N N S -3.888 50.816 46.965 3.948 -0.092 -0.856 C9 KLC 6
KLC C10 C7 C 0 1 N N N -3.900 52.073 47.899 4.181 -1.404 -0.113 C10 KLC 7
KLC C12 C8 C 0 1 N N N -1.287 52.035 48.299 1.847 -1.478 0.858 C12 KLC 8
KLC C13 C9 C 0 1 N N S 0.040 52.824 48.090 0.445 -1.969 0.472 C13 KLC 9
KLC C3 C10 C 0 1 N N N -3.383 49.931 44.573 2.448 1.894 -0.630 C3 KLC 10
KLC C1 C11 C 0 1 N N S -0.504 49.838 44.571 -0.500 3.260 0.762 C1 KLC 11
KLC C15 C12 C 0 1 N N S 1.801 51.120 47.281 -1.425 -0.397 1.092 C15 KLC 12
KLC C2 C13 C 0 1 N N N -3.653 51.156 45.478 3.527 1.048 0.060 C2 KLC 13
KLC C21 C14 C 0 1 N N N 0.682 54.750 46.909 -0.799 -2.239 -1.556 C21 KLC 14
KLC C22 C15 C 0 1 N N N -0.799 47.193 47.254 -0.322 4.076 -2.293 C22 KLC 15
KLC C23 C16 C 0 1 N N N -4.254 51.654 49.339 4.795 -1.158 1.265 C23 KLC 16
KLC C24 C17 C 0 1 N N N -5.047 53.007 47.467 5.185 -2.243 -0.929 C24 KLC 17
KLC C25 C18 C 0 1 N N N 2.875 50.150 47.667 -2.699 -0.390 1.907 C25 KLC 18
KLC C26 C19 C 0 1 N N N 4.182 50.346 47.430 -3.847 -0.647 1.330 C26 KLC 19
KLC C27 C20 C 0 1 N N N 2.402 48.907 48.368 -2.649 -0.086 3.382 C27 KLC 20
KLC C28 C21 C 0 1 N N R 4.819 51.528 46.734 -3.883 -1.107 -0.105 C28 KLC 21
KLC C29 C22 C 0 1 N N N 5.623 51.056 45.499 -4.547 -0.033 -0.968 C29 KLC 22
KLC C31 C23 C 0 1 N N N 5.721 52.324 47.692 -4.683 -2.408 -0.203 C31 KLC 23
KLC C32 C24 C 0 1 N N N 4.912 53.108 48.736 -4.616 -2.940 -1.636 C32 KLC 24
KLC O16 O1 O 0 1 N N N -2.632 54.008 48.750 3.180 -3.474 0.612 O16 KLC 25
KLC O17 O2 O 0 1 N N N -5.108 50.077 47.072 2.971 -0.284 -1.884 O17 KLC 26
KLC O18 O3 O 0 1 N N N -0.395 49.302 43.251 -0.097 3.356 2.128 O18 KLC 27
KLC O19 O4 O 0 1 N N N -0.532 47.699 45.934 0.387 3.134 -1.486 O19 KLC 28
KLC O20 O5 O 0 1 N N N 0.124 53.438 46.801 0.079 -1.413 -0.789 O20 KLC 29
KLC O30 O6 O 0 1 N N N 5.860 52.100 44.552 -4.471 -0.413 -2.344 O30 KLC 30
KLC O7 O7 O 0 1 N N N 0.765 50.549 46.481 -0.726 0.857 1.302 O7 KLC 31
KLC O8 O8 O 0 1 N N N 1.877 50.308 44.533 -1.707 1.679 -0.497 O8 KLC 32
KLC H1 H1 H 0 1 N N N -3.251 48.648 46.302 2.723 3.738 0.451 H1 KLC 33
KLC H2 H2 H 0 1 N N N -2.940 47.827 44.735 1.793 2.501 1.323 H2 KLC 34
KLC H3 H3 H 0 1 N N N 1.132 51.408 49.310 -1.192 -2.419 1.791 H3 KLC 35
KLC H4 H4 H 0 1 N N N 2.128 52.750 48.653 -0.013 -1.274 2.458 H4 KLC 36
KLC H5 H5 H 0 1 N N N -1.218 49.481 46.472 0.789 4.686 -0.196 H5 KLC 37
KLC H6 H6 H 0 1 N N N -2.383 53.197 46.882 2.479 -2.388 -0.987 H6 KLC 38
KLC H7 H7 H 0 1 N N N -3.055 50.176 47.292 4.892 0.192 -1.350 H7 KLC 39
KLC H8 H8 H 0 1 N N N -1.364 51.754 49.360 2.016 -1.699 1.913 H8 KLC 40
KLC H9 H9 H 0 1 N N N -1.255 51.126 47.680 1.893 -0.406 0.693 H9 KLC 41
KLC H10 H10 H 0 1 N N N 0.006 53.642 48.824 0.465 -3.058 0.392 H10 KLC 42
KLC H11 H11 H 0 1 N N N -2.695 50.236 43.771 1.612 1.253 -0.908 H11 KLC 43
KLC H12 H12 H 0 1 N N N -4.338 49.606 44.134 2.871 2.369 -1.512 H12 KLC 44
KLC H13 H13 H 0 1 N N N -1.115 50.751 44.510 -1.309 3.977 0.584 H13 KLC 45
KLC H14 H14 H 0 1 N N N 2.315 51.816 46.602 -1.691 -0.509 0.044 H14 KLC 46
KLC H15 H15 H 0 1 N N N -2.785 51.829 45.413 3.135 0.702 1.010 H15 KLC 47
KLC H16 H16 H 0 1 N N N -4.547 51.673 45.099 4.394 1.691 0.252 H16 KLC 48
KLC H17 H17 H 0 1 N N N 0.740 55.208 45.910 -1.030 -1.746 -2.500 H17 KLC 49
KLC H18 H18 H 0 1 N N N 0.044 55.367 47.559 -0.317 -3.196 -1.754 H18 KLC 50
KLC H19 H19 H 0 1 N N N 1.691 54.685 47.341 -1.721 -2.405 -0.998 H19 KLC 51
KLC H20 H20 H 0 1 N N N -0.200 46.287 47.428 -0.495 3.651 -3.281 H20 KLC 52
KLC H21 H21 H 0 1 N N N -0.533 47.956 48.000 -1.278 4.308 -1.824 H21 KLC 53
KLC H22 H22 H 0 1 N N N -1.868 46.949 47.344 0.267 4.989 -2.388 H22 KLC 54
KLC H23 H23 H 0 1 N N N -4.260 52.542 49.989 4.122 -0.538 1.858 H23 KLC 55
KLC H24 H24 H 0 1 N N N -5.249 51.184 49.350 4.949 -2.112 1.770 H24 KLC 56
KLC H25 H25 H 0 1 N N N -3.506 50.936 49.706 5.752 -0.649 1.151 H25 KLC 57
KLC H26 H26 H 0 1 N N N -5.063 53.894 48.118 6.122 -1.695 -1.026 H26 KLC 58
KLC H27 H27 H 0 1 N N N -4.891 53.321 46.424 5.369 -3.188 -0.418 H27 KLC 59
KLC H28 H28 H 0 1 N N N -6.005 52.473 47.550 4.775 -2.440 -1.919 H28 KLC 60
KLC H29 H29 H 0 1 N N N 4.853 49.573 47.775 -4.767 -0.530 1.883 H29 KLC 61
KLC H30 H30 H 0 1 N N N 3.265 48.268 48.605 -2.760 0.987 3.536 H30 KLC 62
KLC H31 H31 H 0 1 N N N 1.885 49.185 49.299 -3.458 -0.612 3.889 H31 KLC 63
KLC H32 H32 H 0 1 N N N 1.709 48.358 47.714 -1.692 -0.415 3.788 H32 KLC 64
KLC H33 H33 H 0 1 N N N 4.019 52.197 46.383 -2.866 -1.279 -0.457 H33 KLC 65
KLC H34 H34 H 0 1 N N N 5.060 50.253 45.001 -5.593 0.072 -0.678 H34 KLC 66
KLC H35 H35 H 0 1 N N N 6.593 50.666 45.841 -4.034 0.918 -0.825 H35 KLC 67
KLC H36 H36 H 0 1 N N N 6.388 51.623 48.215 -4.262 -3.146 0.479 H36 KLC 68
KLC H37 H37 H 0 1 N N N 6.322 53.033 47.105 -5.722 -2.216 0.065 H37 KLC 69
KLC H38 H38 H 0 1 N N N 5.599 53.659 49.395 -5.152 -2.262 -2.301 H38 KLC 70
KLC H39 H39 H 0 1 N N N 4.246 53.819 48.225 -3.575 -3.009 -1.950 H39 KLC 71
KLC H40 H40 H 0 1 N N N 4.311 52.408 49.335 -5.075 -3.928 -1.678 H40 KLC 72
KLC H41 H41 H 0 1 N N N -1.800 54.466 48.745 2.413 -4.057 0.690 H41 KLC 73
KLC H42 H42 H 0 1 N N N -5.268 49.859 47.983 2.777 0.514 -2.395 H42 KLC 74
KLC H43 H43 H 0 1 N N N 0.507 49.362 42.958 -0.808 3.186 2.761 H43 KLC 75
KLC H44 H44 H 0 1 N N N 6.355 51.756 43.818 -4.873 0.223 -2.951 H44 KLC 76
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KLC O18 C1 SING N N 1
KLC O8 C6 DOUB N N 2
KLC O30 C29 SING N N 3
KLC C1 C6 SING N N 4
KLC C1 C5 SING N N 5
KLC C3 C4 SING N N 6
KLC C3 C2 SING N N 7
KLC C6 O7 SING N N 8
KLC C4 C5 SING N N 9
KLC C2 C9 SING N N 10
KLC C29 C28 SING N N 11
KLC C5 O19 SING N N 12
KLC O19 C22 SING N N 13
KLC O7 C15 SING N N 14
KLC C28 C26 SING N N 15
KLC C28 C31 SING N N 16
KLC O20 C21 SING N N 17
KLC O20 C13 SING N N 18
KLC C9 O17 SING N N 19
KLC C9 C10 SING N N 20
KLC C15 C25 SING N N 21
KLC C15 C14 SING N N 22
KLC C26 C25 DOUB N Z 23
KLC C24 C10 SING N N 24
KLC C25 C27 SING N N 25
KLC C31 C32 SING N N 26
KLC C10 C11 SING N N 27
KLC C10 C23 SING N N 28
KLC C11 C12 SING N N 29
KLC C11 O16 SING N N 30
KLC C13 C12 SING N N 31
KLC C13 C14 SING N N 32
KLC C4 H1 SING N N 33
KLC C4 H2 SING N N 34
KLC C14 H3 SING N N 35
KLC C14 H4 SING N N 36
KLC C5 H5 SING N N 37
KLC C11 H6 SING N N 38
KLC C9 H7 SING N N 39
KLC C12 H8 SING N N 40
KLC C12 H9 SING N N 41
KLC C13 H10 SING N N 42
KLC C3 H11 SING N N 43
KLC C3 H12 SING N N 44
KLC C1 H13 SING N N 45
KLC C15 H14 SING N N 46
KLC C2 H15 SING N N 47
KLC C2 H16 SING N N 48
KLC C21 H17 SING N N 49
KLC C21 H18 SING N N 50
KLC C21 H19 SING N N 51
KLC C22 H20 SING N N 52
KLC C22 H21 SING N N 53
KLC C22 H22 SING N N 54
KLC C23 H23 SING N N 55
KLC C23 H24 SING N N 56
KLC C23 H25 SING N N 57
KLC C24 H26 SING N N 58
KLC C24 H27 SING N N 59
KLC C24 H28 SING N N 60
KLC C26 H29 SING N N 61
KLC C27 H30 SING N N 62
KLC C27 H31 SING N N 63
KLC C27 H32 SING N N 64
KLC C28 H33 SING N N 65
KLC C29 H34 SING N N 66
KLC C29 H35 SING N N 67
KLC C31 H36 SING N N 68
KLC C31 H37 SING N N 69
KLC C32 H38 SING N N 70
KLC C32 H39 SING N N 71
KLC C32 H40 SING N N 72
KLC O16 H41 SING N N 73
KLC O17 H42 SING N N 74
KLC O18 H43 SING N N 75
KLC O30 H44 SING N N 76
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KLC InChI InChI 1.06 "InChI=1S/C24H44O8/c1-7-16(14-25)11-15(2)19-12-17(30-5)13-21(27)24(3,4)20(26)10-8-9-18(31-6)22(28)23(29)32-19/h11,16-22,25-28H,7-10,12-14H2,1-6H3/b15-11-/t16-,17-,18-,19+,20+,21+,22+/m1/s1"
KLC InChIKey InChI 1.06 QYFLRYFPHHCRNA-WFGCVQBFSA-N
KLC SMILES_CANONICAL CACTVS 3.385 "CC[C@@H](CO)\C=C(C)/[C@@H]1C[C@H](C[C@H](O)C(C)(C)[C@@H](O)CCC[C@@H](OC)[C@H](O)C(=O)O1)OC"
KLC SMILES CACTVS 3.385 "CC[CH](CO)C=C(C)[CH]1C[CH](C[CH](O)C(C)(C)[CH](O)CCC[CH](OC)[CH](O)C(=O)O1)OC"
KLC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@@H](CO)/C=C(/C)\[C@@H]1C[C@H](C[C@@H](C([C@H](CCC[C@H]([C@@H](C(=O)O1)O)OC)O)(C)C)O)OC"
KLC SMILES "OpenEye OEToolkits" 2.0.7 "CCC(CO)C=C(C)C1CC(CC(C(C(CCCC(C(C(=O)O1)O)OC)O)(C)C)O)OC"
#
_pdbx_chem_comp_identifier.comp_id KLC
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(3~{S},4~{R},8~{S},10~{S},12~{S},14~{S})-14-[(~{Z},4~{R})-4-(hydroxymethyl)hex-2-en-2-yl]-4,12-dimethoxy-9,9-dimethyl-3,8,10-tris(oxidanyl)-1-oxacyclotetradecan-2-one"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KLC "Create component" 2022-05-30 PDBE
KLC "Modify descriptor" 2022-08-22 RCSB
KLC "Initial release" 2022-12-14 RCSB
#