data_KNI
#
_chem_comp.id KNI
_chem_comp.name "(4R)-N-tert-butyl-3-[(2S,3S)-2-hydroxy-3-({N-[(isoquinolin-5-yloxy)acetyl]-S-methyl-L-cysteinyl}amino)-4-phenylbutanoyl]-1,3-thiazolidine-4-carboxamide"
_chem_comp.type peptide-like
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C33 H41 N5 O6 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "KNI-272; (N-TERT-BUTYL-THIOPROLINE)-(5-ISOQUINOLYLOXYACETYL-METHYLTHIOALANINE)-ALLOPHENYLNORSTATINE"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2020-01-26
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 667.839
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KNI
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1HPX
_chem_comp.pdbx_subcomponent_list "TUC SMC 005 PRS NTB"
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KNI C1 C1 C 0 1 Y N N 6.848 1.181 6.159 9.939 -0.160 -1.690 C1 TUC 1
KNI C2 C2 C 0 1 Y N N 6.303 2.017 7.116 8.671 -0.115 -1.191 C2 TUC 2
KNI C3 C3 C 0 1 Y N N 6.886 3.273 7.363 8.431 0.635 -0.028 C3 TUC 3
KNI C4 C4 C 0 1 Y N N 7.991 3.592 6.613 9.524 1.311 0.573 C4 TUC 4
KNI C5 C5 C 0 1 Y N N 8.468 2.649 5.645 10.791 1.200 -0.020 C5 TUC 5
KNI C6 C6 C 0 1 Y N N 6.352 4.170 8.347 7.152 0.734 0.550 C6 TUC 6
KNI C7 C7 C 0 1 Y N N 7.000 5.388 8.521 6.984 1.481 1.683 C7 TUC 7
KNI C8 C8 C 0 1 Y N N 8.109 5.715 7.774 8.059 2.143 2.271 C8 TUC 8
KNI C9 C9 C 0 1 Y N N 8.629 4.846 6.816 9.310 2.068 1.737 C9 TUC 9
KNI C10 C10 C 0 1 N N N 5.140 4.375 10.352 4.828 0.243 0.634 C10 TUC 10
KNI C11 C11 C 0 1 N N N 4.067 3.683 11.106 3.782 -0.531 -0.127 C11 TUC 11
KNI N1 N1 N 0 1 Y N N 7.907 1.459 5.427 10.943 0.481 -1.108 N1 TUC 12
KNI O1 O1 O 0 1 N N N 5.235 3.791 9.082 6.094 0.094 -0.012 O1 TUC 13
KNI O3 O3 O 0 1 N N N 3.327 4.297 11.852 4.091 -1.149 -1.123 O3 TUC 14
KNI N2 N2 N 0 1 N N N 3.955 2.384 10.893 2.504 -0.536 0.301 N SMC 15
KNI C26 C26 C 0 1 N N R 3.028 1.603 11.696 1.487 -1.289 -0.438 CA SMC 16
KNI C12 C12 C 0 1 N N N 1.944 1.001 10.835 1.495 -2.747 0.026 CB SMC 17
KNI S1 S1 S 0 1 N N N 0.668 0.435 11.993 3.128 -3.472 -0.284 SG SMC 18
KNI C27 C27 C 0 1 N N N -0.158 2.056 12.160 2.942 -5.172 0.321 CS SMC 19
KNI C13 C13 C 0 1 N N N 3.783 0.542 12.457 0.130 -0.687 -0.181 C SMC 20
KNI O6 O6 O 0 1 N N N 3.758 -0.629 12.111 0.023 0.276 0.548 O SMC 21
KNI C17 C17 C 0 1 N N N 5.339 -1.386 16.330 -4.704 -1.139 -0.322 C 005 22
KNI N3 N3 N 0 1 N N N 4.496 0.982 13.492 -0.964 -1.218 -0.761 N 005 23
KNI O4 O4 O 0 1 N N N 6.324 -1.234 17.045 -5.538 -0.898 -1.168 O 005 24
KNI C15 C15 C 0 1 N N S 4.705 -0.180 15.642 -3.362 -1.697 -0.723 CA 005 25
KNI C28 C28 C 0 1 Y N N 7.372 0.900 12.976 -1.530 1.632 -1.184 CD 005 26
KNI C16 C16 C 0 1 N N N 6.775 0.654 14.347 -2.517 0.530 -1.476 CG 005 27
KNI C31 C31 C 0 1 Y N N 8.465 1.319 10.446 0.280 3.651 -0.649 CH 005 28
KNI C14 C14 C 0 1 N N S 5.350 0.082 14.274 -2.283 -0.633 -0.510 CB1 005 29
KNI O2 O2 O 0 1 N N N 4.949 0.934 16.427 -3.396 -2.072 -2.102 OB2 005 30
KNI C29 C29 C 0 1 Y N N 7.401 2.166 12.426 -0.305 1.649 -1.824 CE1 005 31
KNI C33 C33 C 0 1 Y N N 7.899 -0.146 12.245 -1.852 2.627 -0.281 CE2 005 32
KNI C30 C30 C 0 1 Y N N 7.949 2.368 11.171 0.600 2.659 -1.556 CZ1 005 33
KNI C32 C32 C 0 1 Y N N 8.437 0.066 10.993 -0.946 3.634 -0.010 CZ2 005 34
KNI N4 N4 N 0 1 N N N 4.742 -2.565 16.064 -4.976 -0.909 0.978 N PRS 35
KNI C20 C20 C 0 1 N N N 3.544 -2.664 15.224 -3.970 -1.076 2.038 CD PRS 36
KNI C18 C18 C 0 1 N N R 5.373 -3.819 16.506 -6.293 -0.474 1.439 CA PRS 37
KNI C19 C19 C 0 1 N N N 4.427 -4.993 16.258 -6.133 0.412 2.706 CB PRS 38
KNI S2 S2 S 0 1 N N N 3.263 -4.440 14.973 -4.805 -0.524 3.576 SG PRS 39
KNI C21 C21 C 0 1 N N N 6.653 -3.979 15.741 -6.968 0.321 0.352 C PRS 40
KNI O5 O5 O 0 1 N N N 6.746 -3.574 14.588 -6.307 1.010 -0.396 O PRS 41
KNI N5 N5 N 0 1 N N N 7.637 -4.575 16.403 -8.307 0.268 0.211 N NTB 42
KNI C22 C22 C 0 1 N N N 9.013 -4.639 15.892 -8.964 1.041 -0.846 C NTB 43
KNI C23 C23 C 0 1 N N N 9.556 -3.249 15.542 -8.431 0.596 -2.210 C1 NTB 44
KNI C24 C24 C 0 1 N N N 9.097 -5.567 14.678 -8.673 2.529 -0.645 C2 NTB 45
KNI C25 C25 C 0 1 N N N 9.880 -5.183 17.021 -10.475 0.804 -0.788 C3 NTB 46
KNI H1 H1 H 0 1 N N N 6.368 0.227 5.999 10.132 -0.739 -2.581 H1 TUC 47
KNI H2 H2 H 0 1 N N N 5.431 1.706 7.673 7.867 -0.645 -1.681 H2 TUC 48
KNI H5 H5 H 0 1 N N N 9.333 2.918 5.057 11.640 1.704 0.417 H5 TUC 49
KNI H7 H7 H 0 1 N N N 6.627 6.088 9.254 6.003 1.559 2.129 H7 TUC 50
KNI H8 H8 H 0 1 N N N 8.589 6.669 7.934 7.898 2.726 3.165 H8 TUC 51
KNI H9 H9 H 0 1 N N N 9.500 5.120 6.239 10.132 2.588 2.205 H9 TUC 52
KNI H101 H101 H 0 0 N N N 4.898 5.444 10.254 4.553 1.298 0.657 H101 TUC 53
KNI H102 H102 H 0 0 N N N 6.097 4.270 10.884 4.893 -0.138 1.653 H102 TUC 54
KNI HN2 HN2 H 0 1 N N N 4.504 1.941 10.184 2.257 -0.042 1.098 H SMC 55
KNI H26 H26 H 0 1 N N N 2.535 2.266 12.422 1.707 -1.246 -1.505 HA SMC 56
KNI H121 H121 H 0 0 N N N 1.537 1.749 10.138 1.274 -2.790 1.092 HB2 SMC 57
KNI H122 H122 H 0 0 N N N 2.336 0.161 10.243 0.738 -3.307 -0.524 HB3 SMC 58
KNI H271 H271 H 0 0 N N N -1.010 1.965 12.849 2.685 -5.154 1.381 HCS1 SMC 59
KNI H272 H272 H 0 0 N N N 0.557 2.792 12.556 2.149 -5.671 -0.236 HCS2 SMC 60
KNI H273 H273 H 0 0 N N N -0.518 2.387 11.175 3.879 -5.712 0.183 HCS3 SMC 61
KNI HN3 HN3 H 0 1 N N N 4.448 1.949 13.742 -0.878 -1.989 -1.344 HN 005 62
KNI H15 H15 H 0 1 N N N 3.631 -0.377 15.508 -3.135 -2.571 -0.114 HA 005 63
KNI H161 H161 H 0 0 N N N 6.739 1.611 14.888 -2.382 0.184 -2.501 HG 005 64
KNI H162 H162 H 0 0 N N N 7.413 -0.066 14.881 -3.531 0.909 -1.351 HGA 005 65
KNI H31 H31 H 0 1 N N N 8.884 1.482 9.464 0.988 4.440 -0.439 HH 005 66
KNI H14 H14 H 0 1 N N N 5.441 -0.899 13.786 -2.330 -0.268 0.516 HB1 005 67
KNI HO2 HO2 H 0 1 N N N 5.600 0.721 17.086 -3.593 -1.341 -2.704 HOB2 005 68
KNI H29 H29 H 0 1 N N N 6.995 3.002 12.977 -0.054 0.873 -2.533 HE1 005 69
KNI H33 H33 H 0 1 N N N 7.890 -1.143 12.659 -2.812 2.616 0.215 HE2 005 70
KNI H30 H30 H 0 1 N N N 7.972 3.364 10.755 1.558 2.672 -2.055 HZ1 005 71
KNI H32 H32 H 0 1 N N N 8.841 -0.768 10.438 -1.196 4.410 0.699 HZ2 005 72
KNI H201 H201 H 0 0 N N N 2.680 -2.200 15.722 -3.678 -2.123 2.121 HD3 PRS 73
KNI H202 H202 H 0 0 N N N 3.700 -2.155 14.262 -3.099 -0.453 1.835 HD2 PRS 74
KNI H18 H18 H 0 1 N N N 5.588 -3.794 17.584 -6.899 -1.347 1.681 HA PRS 75
KNI H191 H191 H 0 0 N N N 4.987 -5.877 15.919 -5.804 1.419 2.447 HB2 PRS 76
KNI H192 H192 H 0 0 N N N 3.889 -5.258 17.180 -7.051 0.436 3.292 HB3 PRS 77
KNI HN5 HN5 H 0 1 N N N 7.433 -4.998 17.286 -8.837 -0.283 0.809 HN1 NTB 78
KNI H231 H231 H 0 0 N N N 9.488 -2.596 16.424 -7.355 0.765 -2.251 H11 NTB 79
KNI H232 H232 H 0 0 N N N 10.607 -3.334 15.229 -8.638 -0.464 -2.353 H12 NTB 80
KNI H233 H233 H 0 0 N N N 8.962 -2.820 14.722 -8.919 1.171 -2.996 H13 NTB 81
KNI H241 H241 H 0 0 N N N 8.704 -6.559 14.946 -9.162 3.104 -1.432 H21 NTB 82
KNI H242 H242 H 0 0 N N N 8.501 -5.147 13.854 -9.053 2.846 0.326 H22 NTB 83
KNI H243 H243 H 0 0 N N N 10.146 -5.662 14.361 -7.597 2.698 -0.687 H23 NTB 84
KNI H251 H251 H 0 0 N N N 9.525 -6.184 17.307 -10.682 -0.257 -0.931 H31 NTB 85
KNI H252 H252 H 0 0 N N N 10.925 -5.247 16.683 -10.855 1.120 0.183 H32 NTB 86
KNI H253 H253 H 0 0 N N N 9.816 -4.510 17.889 -10.963 1.379 -1.574 H33 NTB 87
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KNI C1 C2 SING Y N 1
KNI C1 N1 DOUB Y N 2
KNI C1 H1 SING N N 3
KNI C2 C3 DOUB Y N 4
KNI C2 H2 SING N N 5
KNI C3 C4 SING Y N 6
KNI C3 C6 SING Y N 7
KNI C4 C5 DOUB Y N 8
KNI C4 C9 SING Y N 9
KNI C5 N1 SING Y N 10
KNI C5 H5 SING N N 11
KNI C6 C7 DOUB Y N 12
KNI C6 O1 SING N N 13
KNI C7 C8 SING Y N 14
KNI C7 H7 SING N N 15
KNI C8 C9 DOUB Y N 16
KNI C8 H8 SING N N 17
KNI C9 H9 SING N N 18
KNI C10 C11 SING N N 19
KNI C10 O1 SING N N 20
KNI C10 H101 SING N N 21
KNI C10 H102 SING N N 22
KNI C11 N2 SING N N 23
KNI C11 O3 DOUB N N 24
KNI C12 C26 SING N N 25
KNI C12 S1 SING N N 26
KNI C12 H121 SING N N 27
KNI C12 H122 SING N N 28
KNI C13 C26 SING N N 29
KNI C13 N3 SING N N 30
KNI C13 O6 DOUB N N 31
KNI C14 C15 SING N N 32
KNI C14 C16 SING N N 33
KNI C14 N3 SING N N 34
KNI C14 H14 SING N N 35
KNI C15 C17 SING N N 36
KNI C15 O2 SING N N 37
KNI C15 H15 SING N N 38
KNI C16 C28 SING N N 39
KNI C16 H161 SING N N 40
KNI C16 H162 SING N N 41
KNI C17 N4 SING N N 42
KNI C17 O4 DOUB N N 43
KNI C18 C19 SING N N 44
KNI C18 C21 SING N N 45
KNI C18 N4 SING N N 46
KNI C18 H18 SING N N 47
KNI C19 S2 SING N N 48
KNI C19 H191 SING N N 49
KNI C19 H192 SING N N 50
KNI C20 N4 SING N N 51
KNI C20 S2 SING N N 52
KNI C20 H201 SING N N 53
KNI C20 H202 SING N N 54
KNI C21 N5 SING N N 55
KNI C21 O5 DOUB N N 56
KNI C22 C23 SING N N 57
KNI C22 C24 SING N N 58
KNI C22 C25 SING N N 59
KNI C22 N5 SING N N 60
KNI C23 H231 SING N N 61
KNI C23 H232 SING N N 62
KNI C23 H233 SING N N 63
KNI C24 H241 SING N N 64
KNI C24 H242 SING N N 65
KNI C24 H243 SING N N 66
KNI C25 H251 SING N N 67
KNI C25 H252 SING N N 68
KNI C25 H253 SING N N 69
KNI C26 N2 SING N N 70
KNI C26 H26 SING N N 71
KNI C27 S1 SING N N 72
KNI C27 H271 SING N N 73
KNI C27 H272 SING N N 74
KNI C27 H273 SING N N 75
KNI C28 C29 DOUB Y N 76
KNI C28 C33 SING Y N 77
KNI C29 C30 SING Y N 78
KNI C29 H29 SING N N 79
KNI C30 C31 DOUB Y N 80
KNI C30 H30 SING N N 81
KNI C31 C32 SING Y N 82
KNI C31 H31 SING N N 83
KNI C32 C33 DOUB Y N 84
KNI C32 H32 SING N N 85
KNI C33 H33 SING N N 86
KNI N2 HN2 SING N N 87
KNI N3 HN3 SING N N 88
KNI N5 HN5 SING N N 89
KNI O2 HO2 SING N N 90
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KNI SMILES ACDLabs 12.01 "O=C(NC(C)(C)C)C4N(C(=O)C(O)C(NC(=O)C(NC(=O)COc2c1ccncc1ccc2)CSC)Cc3ccccc3)CSC4"
KNI SMILES_CANONICAL CACTVS 3.370 "CSC[C@H](NC(=O)COc1cccc2cnccc12)C(=O)N[C@@H](Cc3ccccc3)[C@H](O)C(=O)N4CSC[C@H]4C(=O)NC(C)(C)C"
KNI SMILES CACTVS 3.370 "CSC[CH](NC(=O)COc1cccc2cnccc12)C(=O)N[CH](Cc3ccccc3)[CH](O)C(=O)N4CSC[CH]4C(=O)NC(C)(C)C"
KNI SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(C)(C)NC(=O)[C@@H]1CSCN1C(=O)[C@H]([C@H](Cc2ccccc2)NC(=O)[C@H](CSC)NC(=O)COc3cccc4c3ccnc4)O"
KNI SMILES "OpenEye OEToolkits" 1.7.0 "CC(C)(C)NC(=O)C1CSCN1C(=O)C(C(Cc2ccccc2)NC(=O)C(CSC)NC(=O)COc3cccc4c3ccnc4)O"
KNI InChI InChI 1.03 "InChI=1S/C33H41N5O6S2/c1-33(2,3)37-31(42)26-19-46-20-38(26)32(43)29(40)24(15-21-9-6-5-7-10-21)36-30(41)25(18-45-4)35-28(39)17-44-27-12-8-11-22-16-34-14-13-23(22)27/h5-14,16,24-26,29,40H,15,17-20H2,1-4H3,(H,35,39)(H,36,41)(H,37,42)/t24-,25-,26-,29-/m0/s1"
KNI InChIKey InChI 1.03 NJBBLOIWMSYVCQ-VZTVMPNDSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
KNI "SYSTEMATIC NAME" ACDLabs 12.01 "(4R)-N-tert-butyl-3-[(2S,3S)-2-hydroxy-3-({N-[(isoquinolin-5-yloxy)acetyl]-S-methyl-L-cysteinyl}amino)-4-phenylbutanoyl]-1,3-thiazolidine-4-carboxamide"
KNI "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(4R)-N-tert-butyl-3-[(2S,3S)-2-hydroxy-3-[[(2R)-2-(2-isoquinolin-5-yloxyethanoylamino)-3-methylsulfanyl-propanoyl]amino]-4-phenyl-butanoyl]-1,3-thiazolidine-4-carboxamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KNI "Create component" 1999-07-08 EBI
KNI "Other modification" 2010-11-11 RCSB
KNI "Modify descriptor" 2011-06-04 RCSB
KNI "Modify synonyms" 2019-12-17 PDBE
KNI "Modify synonyms" 2020-01-26 RCSB
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 KNI "(N-TERT-BUTYL-THIOPROLINE)-(5-ISOQUINOLYLOXYACETYL-METHYLTHIOALANINE)-ALLOPHENYLNORSTATINE" ? ?
2 KNI KNI-272 ? ?
#