data_KOC # _chem_comp.id KOC _chem_comp.name "N-{5-[difluoro(phosphono)methyl]-1-benzothiophene-2-carbonyl}-3-methyl-L-valyl-L-prolyl-N,N-dimethyl-N~3~-[4-(1,3-thiazol-2-yl)phenyl]-beta-alaninamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C35 H40 F2 N5 O7 P S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms AK2305 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-08 _chem_comp.pdbx_modified_date 2023-02-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 775.822 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KOC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7TVB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KOC C10 C1 C 0 1 N N N 18.216 63.158 15.856 -0.996 2.204 -4.110 C10 KOC 1 KOC C13 C2 C 0 1 N N N 21.330 66.093 18.328 -1.635 3.894 -1.473 C13 KOC 2 KOC C14 C3 C 0 1 N N N 21.844 66.607 19.653 -2.825 4.714 -0.931 C14 KOC 3 KOC C15 C4 C 0 1 N N N 20.712 66.306 20.617 -3.896 3.628 -0.651 C15 KOC 4 KOC C16 C5 C 0 1 N N S 20.138 64.968 20.127 -3.021 2.444 -0.169 C16 KOC 5 KOC C17 C6 C 0 1 N N N 18.615 64.931 20.274 -3.736 1.137 -0.396 C17 KOC 6 KOC C18 C7 C 0 1 Y N N 18.892 63.516 22.251 -5.166 -0.598 0.378 C18 KOC 7 KOC C20 C8 C 0 1 Y N N 20.317 63.493 24.189 -5.535 -2.556 -0.956 C20 KOC 8 KOC C23 C9 C 0 1 Y N N 22.649 60.941 26.712 -7.422 -6.357 -1.120 C23 KOC 9 KOC O6 O1 O 0 1 N N N 23.168 63.231 17.244 2.929 2.303 -2.187 O6 KOC 10 KOC C6 C10 C 0 1 N N N 22.519 62.382 16.637 2.655 1.283 -1.583 C6 KOC 11 KOC C5 C11 C 0 1 Y N N 23.095 61.039 16.417 3.727 0.463 -1.000 C5 KOC 12 KOC C32 C12 C 0 1 Y N N 22.540 59.845 16.129 5.030 0.753 -1.072 C32 KOC 13 KOC C3 C13 C 0 1 Y N N 23.461 58.735 16.154 5.891 -0.163 -0.446 C3 KOC 14 KOC C2 C14 C 0 1 Y N N 23.262 57.364 15.986 7.303 -0.134 -0.352 C2 KOC 15 KOC S S1 S 0 1 Y N N 24.813 60.906 16.708 3.472 -1.026 -0.107 S KOC 16 KOC C4 C15 C 0 1 Y N N 24.762 59.189 16.447 5.202 -1.229 0.147 C4 KOC 17 KOC C33 C16 C 0 1 Y N N 25.831 58.297 16.530 5.912 -2.232 0.814 C33 KOC 18 KOC C34 C17 C 0 1 Y N N 25.596 56.944 16.351 7.283 -2.175 0.889 C34 KOC 19 KOC C1 C18 C 0 1 Y N N 24.313 56.459 16.108 7.971 -1.121 0.302 C1 KOC 20 KOC C C19 C 0 1 N N N 23.990 54.945 16.120 9.475 -1.070 0.391 C KOC 21 KOC F1 F1 F 0 1 N N N 23.792 54.554 17.419 9.981 -0.325 -0.679 F1 KOC 22 KOC P P1 P 0 1 N N N 25.357 53.930 15.328 9.965 -0.287 1.962 P KOC 23 KOC O2 O2 O 0 1 N N N 25.999 54.410 14.066 11.436 -0.131 1.998 O2 KOC 24 KOC O1 O3 O 0 1 N N N 26.356 53.833 16.478 9.269 1.160 2.080 O1 KOC 25 KOC O O4 O 0 1 N N N 24.690 52.556 15.160 9.493 -1.212 3.193 O KOC 26 KOC F F2 F 0 1 N N N 22.760 54.708 15.545 9.989 -2.370 0.338 F KOC 27 KOC N N1 N 0 1 N N N 21.273 62.599 16.187 1.369 0.904 -1.448 N KOC 28 KOC C7 C20 C 0 1 N N S 20.587 63.849 16.476 0.300 1.721 -2.029 C7 KOC 29 KOC C8 C21 C 0 1 N N N 19.373 64.111 15.533 0.106 1.337 -3.498 C8 KOC 30 KOC C11 C22 C 0 1 N N N 18.886 65.550 15.723 -0.292 -0.137 -3.592 C11 KOC 31 KOC C9 C23 C 0 1 N N N 19.779 63.914 14.067 1.414 1.562 -4.260 C9 KOC 32 KOC C12 C24 C 0 1 N N N 20.225 63.846 17.968 -0.982 1.482 -1.274 C12 KOC 33 KOC O5 O5 O 0 1 N N N 19.722 62.854 18.461 -1.274 0.361 -0.915 O5 KOC 34 KOC N1 N2 N 0 1 N N N 20.538 64.917 18.718 -1.804 2.513 -0.998 N1 KOC 35 KOC O4 O6 O 0 1 N N N 17.905 65.464 19.444 -3.541 0.508 -1.414 O4 KOC 36 KOC N2 N3 N 0 1 N N N 18.080 64.242 21.321 -4.592 0.667 0.533 N2 KOC 37 KOC C27 C25 C 0 1 N N N 16.639 64.325 21.602 -4.922 1.483 1.704 C27 KOC 38 KOC C28 C26 C 0 1 N N N 16.305 65.493 22.519 -6.197 2.283 1.426 C28 KOC 39 KOC C29 C27 C 0 1 N N N 14.829 65.570 22.852 -6.467 3.214 2.580 C29 KOC 40 KOC O3 O7 O 0 1 N N N 13.993 65.163 22.054 -5.714 3.236 3.531 O3 KOC 41 KOC N4 N4 N 0 1 N N N 14.471 66.129 24.026 -7.545 4.022 2.555 N4 KOC 42 KOC C31 C28 C 0 1 N N N 15.405 66.502 25.093 -8.454 3.996 1.406 C31 KOC 43 KOC C30 C29 C 0 1 N N N 13.067 66.422 24.316 -7.808 4.928 3.676 C30 KOC 44 KOC C26 C30 C 0 1 Y N N 19.151 62.160 22.055 -5.939 -1.138 1.399 C26 KOC 45 KOC C25 C31 C 0 1 Y N N 19.987 61.480 22.923 -6.510 -2.383 1.248 C25 KOC 46 KOC C21 C32 C 0 1 Y N N 20.586 62.140 23.997 -6.311 -3.102 0.068 C21 KOC 47 KOC C19 C33 C 0 1 Y N N 19.474 64.173 23.332 -4.966 -1.311 -0.798 C19 KOC 48 KOC C22 C34 C 0 1 Y N N 21.512 61.430 24.893 -6.923 -4.437 -0.098 C22 KOC 49 KOC S1 S2 S 0 1 Y N N 22.567 60.187 24.316 -7.922 -5.260 1.098 S1 KOC 50 KOC C24 C35 C 0 1 Y N N 23.247 60.069 25.882 -8.098 -6.629 0.001 C24 KOC 51 KOC N3 N5 N 0 1 Y N N 21.657 61.717 26.161 -6.807 -5.196 -1.150 N3 KOC 52 KOC H1 H1 H 0 1 N N N 17.915 63.289 16.906 -1.945 1.982 -3.621 H1 KOC 53 KOC H2 H2 H 0 1 N N N 17.363 63.382 15.199 -0.752 3.256 -3.968 H2 KOC 54 KOC H3 H3 H 0 1 N N N 18.541 62.119 15.695 -1.077 1.989 -5.175 H3 KOC 55 KOC H4 H4 H 0 1 N N N 22.160 65.809 17.665 -1.637 3.914 -2.563 H4 KOC 56 KOC H5 H5 H 0 1 N N N 20.702 66.845 17.828 -0.699 4.305 -1.095 H5 KOC 57 KOC H6 H6 H 0 1 N N N 22.763 66.079 19.949 -2.550 5.231 -0.011 H6 KOC 58 KOC H7 H7 H 0 1 N N N 22.042 67.688 19.605 -3.179 5.422 -1.681 H7 KOC 59 KOC H8 H8 H 0 1 N N N 21.091 66.214 21.646 -4.584 3.950 0.131 H8 KOC 60 KOC H9 H9 H 0 1 N N N 19.947 67.095 20.578 -4.438 3.370 -1.561 H9 KOC 61 KOC H10 H10 H 0 1 N N N 20.589 64.139 20.692 -2.772 2.561 0.885 H10 KOC 62 KOC H11 H11 H 0 1 N N N 20.772 64.016 25.017 -5.380 -3.109 -1.870 H11 KOC 63 KOC H12 H12 H 0 1 N N N 22.931 61.027 27.751 -7.381 -7.049 -1.947 H12 KOC 64 KOC H13 H13 H 0 1 N N N 21.491 59.729 15.898 5.397 1.633 -1.579 H13 KOC 65 KOC H14 H14 H 0 1 N N N 22.272 56.997 15.757 7.854 0.678 -0.803 H14 KOC 66 KOC H15 H15 H 0 1 N N N 26.829 58.657 16.731 5.381 -3.054 1.272 H15 KOC 67 KOC H16 H16 H 0 1 N N N 26.423 56.252 16.401 7.827 -2.953 1.405 H16 KOC 68 KOC H17 H17 H 0 1 N N N 27.216 54.100 16.175 8.302 1.134 2.064 H17 KOC 69 KOC H18 H18 H 0 1 N N N 24.808 52.253 14.267 9.721 -0.856 4.062 H18 KOC 70 KOC H19 H19 H 0 1 N N N 20.812 61.894 15.648 1.150 0.091 -0.967 H19 KOC 71 KOC H20 H20 H 0 1 N N N 21.298 64.673 16.317 0.571 2.775 -1.962 H20 KOC 72 KOC H21 H21 H 0 1 N N N 18.592 65.703 16.772 -0.430 -0.410 -4.638 H21 KOC 73 KOC H22 H22 H 0 1 N N N 19.696 66.248 15.464 0.494 -0.754 -3.156 H22 KOC 74 KOC H23 H23 H 0 1 N N N 18.021 65.733 15.069 -1.223 -0.297 -3.048 H23 KOC 75 KOC H24 H24 H 0 1 N N N 20.131 62.882 13.919 1.276 1.289 -5.306 H24 KOC 76 KOC H25 H25 H 0 1 N N N 18.911 64.102 13.418 1.697 2.612 -4.193 H25 KOC 77 KOC H26 H26 H 0 1 N N N 20.586 64.617 13.813 2.199 0.945 -3.824 H26 KOC 78 KOC H27 H27 H 0 1 N N N 16.098 64.453 20.653 -5.081 0.834 2.565 H27 KOC 79 KOC H28 H28 H 0 1 N N N 16.317 63.391 22.085 -4.101 2.169 1.912 H28 KOC 80 KOC H29 H29 H 0 1 N N N 16.872 65.379 23.455 -6.069 2.864 0.512 H29 KOC 81 KOC H30 H30 H 0 1 N N N 16.603 66.428 22.021 -7.036 1.598 1.307 H30 KOC 82 KOC H31 H31 H 0 1 N N N 14.846 66.935 25.935 -9.238 3.259 1.580 H31 KOC 83 KOC H32 H32 H 0 1 N N N 15.947 65.608 25.434 -8.903 4.980 1.276 H32 KOC 84 KOC H33 H33 H 0 1 N N N 16.123 67.242 24.710 -7.897 3.729 0.508 H33 KOC 85 KOC H34 H34 H 0 1 N N N 12.985 66.872 25.316 -7.030 4.807 4.431 H34 KOC 86 KOC H35 H35 H 0 1 N N N 12.676 67.124 23.565 -7.811 5.957 3.319 H35 KOC 87 KOC H36 H36 H 0 1 N N N 12.484 65.490 24.284 -8.778 4.692 4.114 H36 KOC 88 KOC H37 H37 H 0 1 N N N 18.698 61.639 21.224 -6.092 -0.582 2.312 H37 KOC 89 KOC H38 H38 H 0 1 N N N 20.178 60.428 22.768 -7.110 -2.803 2.042 H38 KOC 90 KOC H39 H39 H 0 1 N N N 19.265 65.219 23.501 -4.369 -0.887 -1.592 H39 KOC 91 KOC H40 H40 H 0 1 N N N 24.041 59.393 26.163 -8.656 -7.531 0.201 H40 KOC 92 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KOC O2 P DOUB N N 1 KOC C9 C8 SING N N 2 KOC O P SING N N 3 KOC P C SING N N 4 KOC P O1 SING N N 5 KOC C8 C11 SING N N 6 KOC C8 C10 SING N N 7 KOC C8 C7 SING N N 8 KOC F C SING N N 9 KOC C2 C1 DOUB Y N 10 KOC C2 C3 SING Y N 11 KOC C1 C SING N N 12 KOC C1 C34 SING Y N 13 KOC C F1 SING N N 14 KOC C32 C3 SING Y N 15 KOC C32 C5 DOUB Y N 16 KOC C3 C4 DOUB Y N 17 KOC N C7 SING N N 18 KOC N C6 SING N N 19 KOC C34 C33 DOUB Y N 20 KOC C5 C6 SING N N 21 KOC C5 S SING Y N 22 KOC C4 C33 SING Y N 23 KOC C4 S SING Y N 24 KOC C7 C12 SING N N 25 KOC C6 O6 DOUB N N 26 KOC C12 O5 DOUB N N 27 KOC C12 N1 SING N N 28 KOC C13 N1 SING N N 29 KOC C13 C14 SING N N 30 KOC N1 C16 SING N N 31 KOC O4 C17 DOUB N N 32 KOC C14 C15 SING N N 33 KOC C16 C17 SING N N 34 KOC C16 C15 SING N N 35 KOC C17 N2 SING N N 36 KOC N2 C27 SING N N 37 KOC N2 C18 SING N N 38 KOC C27 C28 SING N N 39 KOC O3 C29 DOUB N N 40 KOC C26 C18 DOUB Y N 41 KOC C26 C25 SING Y N 42 KOC C18 C19 SING Y N 43 KOC C28 C29 SING N N 44 KOC C29 N4 SING N N 45 KOC C25 C21 DOUB Y N 46 KOC C19 C20 DOUB Y N 47 KOC C21 C20 SING Y N 48 KOC C21 C22 SING N N 49 KOC N4 C30 SING N N 50 KOC N4 C31 SING N N 51 KOC S1 C22 SING Y N 52 KOC S1 C24 SING Y N 53 KOC C22 N3 DOUB Y N 54 KOC C24 C23 DOUB Y N 55 KOC N3 C23 SING Y N 56 KOC C10 H1 SING N N 57 KOC C10 H2 SING N N 58 KOC C10 H3 SING N N 59 KOC C13 H4 SING N N 60 KOC C13 H5 SING N N 61 KOC C14 H6 SING N N 62 KOC C14 H7 SING N N 63 KOC C15 H8 SING N N 64 KOC C15 H9 SING N N 65 KOC C16 H10 SING N N 66 KOC C20 H11 SING N N 67 KOC C23 H12 SING N N 68 KOC C32 H13 SING N N 69 KOC C2 H14 SING N N 70 KOC C33 H15 SING N N 71 KOC C34 H16 SING N N 72 KOC O1 H17 SING N N 73 KOC O H18 SING N N 74 KOC N H19 SING N N 75 KOC C7 H20 SING N N 76 KOC C11 H21 SING N N 77 KOC C11 H22 SING N N 78 KOC C11 H23 SING N N 79 KOC C9 H24 SING N N 80 KOC C9 H25 SING N N 81 KOC C9 H26 SING N N 82 KOC C27 H27 SING N N 83 KOC C27 H28 SING N N 84 KOC C28 H29 SING N N 85 KOC C28 H30 SING N N 86 KOC C31 H31 SING N N 87 KOC C31 H32 SING N N 88 KOC C31 H33 SING N N 89 KOC C30 H34 SING N N 90 KOC C30 H35 SING N N 91 KOC C30 H36 SING N N 92 KOC C26 H37 SING N N 93 KOC C25 H38 SING N N 94 KOC C19 H39 SING N N 95 KOC C24 H40 SING N N 96 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KOC SMILES ACDLabs 12.01 "O=P(O)(O)C(F)(F)c1cc2cc(sc2cc1)C(=O)NC(C(=O)N1CCCC1C(=O)N(CCC(=O)N(C)C)c1ccc(cc1)c1nccs1)C(C)(C)C" KOC InChI InChI 1.03 "InChI=1S/C35H40F2N5O7PS2/c1-34(2,3)29(39-30(44)27-20-22-19-23(10-13-26(22)52-27)35(36,37)50(47,48)49)33(46)42-16-6-7-25(42)32(45)41(17-14-28(43)40(4)5)24-11-8-21(9-12-24)31-38-15-18-51-31/h8-13,15,18-20,25,29H,6-7,14,16-17H2,1-5H3,(H,39,44)(H2,47,48,49)/t25-,29+/m0/s1" KOC InChIKey InChI 1.03 KJJHAYNANYPNEE-ABYGYWHVSA-N KOC SMILES_CANONICAL CACTVS 3.385 "CN(C)C(=O)CCN(C(=O)[C@@H]1CCCN1C(=O)[C@@H](NC(=O)c2sc3ccc(cc3c2)C(F)(F)[P](O)(O)=O)C(C)(C)C)c4ccc(cc4)c5sccn5" KOC SMILES CACTVS 3.385 "CN(C)C(=O)CCN(C(=O)[CH]1CCCN1C(=O)[CH](NC(=O)c2sc3ccc(cc3c2)C(F)(F)[P](O)(O)=O)C(C)(C)C)c4ccc(cc4)c5sccn5" KOC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)[C@@H](C(=O)N1CCC[C@H]1C(=O)N(CCC(=O)N(C)C)c2ccc(cc2)c3nccs3)NC(=O)c4cc5cc(ccc5s4)C(F)(F)P(=O)(O)O" KOC SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C)C(C(=O)N1CCCC1C(=O)N(CCC(=O)N(C)C)c2ccc(cc2)c3nccs3)NC(=O)c4cc5cc(ccc5s4)C(F)(F)P(=O)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier KOC "SYSTEMATIC NAME" ACDLabs 12.01 "N-{5-[difluoro(phosphono)methyl]-1-benzothiophene-2-carbonyl}-3-methyl-L-valyl-L-prolyl-N,N-dimethyl-N~3~-[4-(1,3-thiazol-2-yl)phenyl]-beta-alaninamide" KOC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[[2-[[(2~{S})-1-[(2~{S})-2-[[3-(dimethylamino)-3-oxidanylidene-propyl]-[4-(1,3-thiazol-2-yl)phenyl]carbamoyl]pyrrolidin-1-yl]-3,3-dimethyl-1-oxidanylidene-butan-2-yl]carbamoyl]-1-benzothiophen-5-yl]-bis(fluoranyl)methyl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KOC "Create component" 2022-02-08 RCSB KOC "Initial release" 2023-02-15 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id KOC _pdbx_chem_comp_synonyms.name AK2305 _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #