data_KOS # _chem_comp.id KOS _chem_comp.name "17-DESMETHOXY-17-N,N-DIMETHYLAMINOETHYLAMINO-GELDANAMYCIN" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H48 N4 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 17-DMAG _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-03-20 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 616.746 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KOS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1OSF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KOS C27 C27 C 0 1 N N N 79.120 -25.778 57.757 -1.604 2.137 0.845 C27 KOS 1 KOS O6 O6 O 0 1 N N N 79.780 -25.636 59.223 -1.401 0.723 0.811 O6 KOS 2 KOS C12 C12 C 0 1 N N S 78.892 -25.205 60.269 -2.666 0.131 0.509 C12 KOS 3 KOS C13 C13 C 0 1 N N N 79.786 -25.194 61.574 -2.566 -0.672 -0.787 C13 KOS 4 KOS C14 C14 C 0 1 N N R 80.536 -26.464 62.106 -1.875 0.143 -1.877 C14 KOS 5 KOS C28 C28 C 0 1 N N N 79.640 -27.689 61.797 -2.823 1.232 -2.385 C28 KOS 6 KOS C15 C15 C 0 1 N N N 80.997 -26.381 63.709 -1.501 -0.777 -3.045 C15 KOS 7 KOS C16 C16 C 0 1 N N N 79.837 -26.085 64.717 -0.030 -0.636 -3.339 C16 KOS 8 KOS C17 C17 C 0 1 N N N 79.379 -24.854 65.238 0.413 -0.430 -4.600 C17 KOS 9 KOS N29 N29 N 0 1 N N N 79.989 -23.582 64.908 -0.461 -0.340 -5.655 N29 KOS 10 KOS C30 C30 C 0 1 N N N 81.394 -23.256 65.114 0.045 -0.116 -7.011 C30 KOS 11 KOS C31 C31 C 0 1 N N N 81.916 -22.832 66.543 -1.127 -0.056 -7.992 C31 KOS 12 KOS N32 N32 N 0 1 N N N 81.236 -21.928 67.594 -0.618 0.167 -9.351 N32 KOS 13 KOS C33 C33 C 0 1 N N N 82.088 -21.747 68.738 -1.788 0.214 -10.238 C33 KOS 14 KOS C34 C34 C 0 1 N N N 80.067 -22.471 68.219 -0.024 1.511 -9.364 C34 KOS 15 KOS C18 C18 C 0 1 N N N 78.211 -24.730 66.191 1.877 -0.302 -4.857 C18 KOS 16 KOS O8 O8 O 0 1 N N N 77.876 -23.605 66.574 2.287 -0.165 -5.993 O8 KOS 17 KOS C19 C19 C 0 1 N N N 77.505 -25.975 66.638 2.813 -0.340 -3.734 C19 KOS 18 KOS C20 C20 C 0 1 N N N 77.918 -27.217 66.189 2.344 -0.516 -2.480 C20 KOS 19 KOS N1 N1 N 0 1 N N N 77.373 -28.491 66.534 3.203 -0.527 -1.397 N1 KOS 20 KOS C1 C1 C 0 1 N N N 76.857 -29.675 65.873 2.763 -0.123 -0.202 C1 KOS 21 KOS O1 O1 O 0 1 N N N 76.519 -30.517 66.555 1.789 0.605 -0.147 O1 KOS 22 KOS C2 C2 C 0 1 N N N 76.821 -29.713 64.329 3.374 -0.508 1.065 C2 KOS 23 KOS C22 C22 C 0 1 N N N 77.491 -30.906 63.690 4.601 -1.372 1.100 C22 KOS 24 KOS C3 C3 C 0 1 N N N 76.214 -28.675 63.659 2.790 -0.061 2.203 C3 KOS 25 KOS C4 C4 C 0 1 N N N 76.066 -28.460 62.214 3.309 -0.363 3.528 C4 KOS 26 KOS C5 C5 C 0 1 N N N 75.146 -27.698 61.636 2.663 0.035 4.626 C5 KOS 27 KOS C6 C6 C 0 1 N N S 74.067 -26.907 62.322 1.372 0.805 4.557 C6 KOS 28 KOS O2 O2 O 0 1 N N N 72.672 -27.418 62.005 1.501 1.994 5.344 O2 KOS 29 KOS C23 C23 C 0 1 N N N 72.435 -28.767 61.824 1.999 3.013 4.474 C23 KOS 30 KOS C7 C7 C 0 1 N N S 74.034 -25.389 61.897 0.230 -0.046 5.117 C7 KOS 31 KOS O3 O3 O 0 1 N N N 73.012 -24.726 62.595 0.170 0.111 6.559 O3 KOS 32 KOS C24 C24 C 0 1 N N N 72.283 -23.761 61.872 -0.275 -0.898 7.329 C24 KOS 33 KOS N2 N2 N 0 1 N N N 71.152 -23.486 62.555 -0.331 -0.752 8.668 N2 KOS 34 KOS O4 O4 O 0 1 N N N 72.602 -23.244 60.811 -0.627 -1.943 6.817 O4 KOS 35 KOS C8 C8 C 0 1 N N N 75.405 -24.526 62.119 -1.081 0.393 4.508 C8 KOS 36 KOS C25 C25 C 0 1 N N N 75.849 -24.317 63.563 -1.671 1.721 4.906 C25 KOS 37 KOS C9 C9 C 0 1 N N N 76.015 -24.060 61.066 -1.676 -0.397 3.651 C9 KOS 38 KOS C10 C10 C 0 1 N N S 77.270 -23.222 60.925 -2.984 -0.058 2.990 C10 KOS 39 KOS C26 C26 C 0 1 N N N 76.730 -21.836 60.510 -4.144 -0.516 3.882 C26 KOS 40 KOS C11 C11 C 0 1 N N R 78.273 -23.795 59.915 -3.075 -0.801 1.652 C11 KOS 41 KOS O5 O5 O 0 1 N N N 79.406 -22.859 59.908 -4.419 -1.241 1.447 O5 KOS 42 KOS C21 C21 C 0 1 N N N 79.117 -27.318 65.196 0.891 -0.742 -2.264 C21 KOS 43 KOS O9 O9 O 0 1 N N N 79.484 -28.436 64.790 0.477 -1.055 -1.164 O9 KOS 44 KOS H271 1H27 H 0 0 N N N 79.808 -26.112 56.946 -0.687 2.628 1.170 H271 KOS 45 KOS H272 2H27 H 0 0 N N N 78.232 -26.451 57.803 -1.872 2.489 -0.150 H272 KOS 46 KOS H273 3H27 H 0 0 N N N 78.628 -24.820 57.467 -2.409 2.372 1.541 H273 KOS 47 KOS H12 H12 H 0 1 N N N 78.010 -25.873 60.409 -3.417 0.913 0.402 H12 KOS 48 KOS H131 1H13 H 0 0 N N N 80.544 -24.385 61.452 -1.994 -1.583 -0.599 H131 KOS 49 KOS H132 2H13 H 0 0 N N N 79.155 -24.805 62.407 -3.568 -0.947 -1.120 H132 KOS 50 KOS H14 H14 H 0 1 N N N 81.514 -26.550 61.578 -0.974 0.606 -1.481 H14 KOS 51 KOS H281 1H28 H 0 0 N N N 80.173 -28.592 62.175 -2.327 1.812 -3.163 H281 KOS 52 KOS H282 2H28 H 0 0 N N N 78.607 -27.588 62.205 -3.722 0.770 -2.795 H282 KOS 53 KOS H283 3H28 H 0 0 N N N 79.361 -27.765 60.720 -3.097 1.890 -1.560 H283 KOS 54 KOS H151 1H15 H 0 0 N N N 81.534 -27.312 64.003 -1.719 -1.811 -2.769 H151 KOS 55 KOS H152 2H15 H 0 0 N N N 81.816 -25.635 63.835 -2.098 -0.506 -3.912 H152 KOS 56 KOS H29 H29 H 0 1 N N N 79.446 -22.862 65.384 -1.416 -0.424 -5.503 H29 KOS 57 KOS H301 1H30 H 0 0 N N N 82.008 -24.115 64.758 0.594 0.824 -7.043 H301 KOS 58 KOS H302 2H30 H 0 0 N N N 81.678 -22.459 64.387 0.710 -0.934 -7.290 H302 KOS 59 KOS H311 1H31 H 0 0 N N N 82.139 -23.787 67.073 -1.676 -0.997 -7.960 H311 KOS 60 KOS H312 2H31 H 0 0 N N N 82.921 -22.382 66.370 -1.791 0.761 -7.713 H312 KOS 61 KOS H331 1H33 H 0 0 N N N 81.597 -21.094 69.496 -1.460 0.380 -11.264 H331 KOS 62 KOS H332 2H33 H 0 0 N N N 82.404 -22.722 69.175 -2.328 -0.729 -10.177 H332 KOS 63 KOS H333 3H33 H 0 0 N N N 83.092 -21.359 68.447 -2.444 1.029 -9.930 H333 KOS 64 KOS H341 1H34 H 0 0 N N N 79.576 -21.818 68.977 0.369 1.725 -10.357 H341 KOS 65 KOS H342 2H34 H 0 0 N N N 79.326 -22.773 67.442 -0.786 2.247 -9.109 H342 KOS 66 KOS H343 3H34 H 0 0 N N N 80.302 -23.464 68.667 0.784 1.558 -8.634 H343 KOS 67 KOS H19 H19 H 0 1 N N N 76.644 -25.977 67.327 3.874 -0.231 -3.902 H19 KOS 68 KOS HN1 HN1 H 0 1 N N N 77.343 -28.581 67.549 4.129 -0.821 -1.522 HN1 KOS 69 KOS H221 1H22 H 0 0 N N N 77.465 -30.933 62.575 4.897 -1.543 2.135 H221 KOS 70 KOS H222 2H22 H 0 0 N N N 78.543 -30.989 64.048 4.386 -2.328 0.621 H222 KOS 71 KOS H223 3H22 H 0 0 N N N 77.065 -31.849 64.104 5.412 -0.874 0.568 H223 KOS 72 KOS H3 H3 H 0 1 N N N 75.799 -27.931 64.359 1.901 0.551 2.098 H3 KOS 73 KOS H4 H4 H 0 1 N N N 76.729 -28.930 61.468 4.233 -0.916 3.652 H4 KOS 74 KOS H5 H5 H 0 1 N N N 75.283 -27.723 60.541 3.083 -0.206 5.595 H5 KOS 75 KOS H6 H6 H 0 1 N N N 74.322 -27.022 63.401 1.146 1.082 3.532 H6 KOS 76 KOS H231 1H23 H 0 0 N N N 71.411 -29.142 61.591 2.115 3.942 5.031 H231 KOS 77 KOS H232 2H23 H 0 0 N N N 73.128 -29.138 61.033 2.966 2.707 4.073 H232 KOS 78 KOS H233 3H23 H 0 0 N N N 72.806 -29.308 62.725 1.298 3.166 3.654 H233 KOS 79 KOS H7 H7 H 0 1 N N N 73.873 -25.434 60.794 0.407 -1.094 4.873 H7 KOS 80 KOS HN21 1HN2 H 0 0 N N N 70.885 -23.917 63.440 -0.652 -1.480 9.222 HN21 KOS 81 KOS HN22 2HN2 H 0 0 N N N 70.624 -22.787 62.031 -0.050 0.081 9.076 HN22 KOS 82 KOS H251 1H25 H 0 0 N N N 76.783 -23.728 63.714 -2.610 1.876 4.374 H251 KOS 83 KOS H252 2H25 H 0 0 N N N 75.018 -23.859 64.149 -1.856 1.730 5.980 H252 KOS 84 KOS H253 3H25 H 0 0 N N N 75.939 -25.303 64.074 -0.974 2.519 4.651 H253 KOS 85 KOS H9 H9 H 0 1 N N N 75.410 -24.408 60.211 -1.199 -1.345 3.409 H9 KOS 86 KOS H10 H10 H 0 1 N N N 77.863 -23.189 61.868 -3.065 1.009 2.805 H10 KOS 87 KOS H261 1H26 H 0 0 N N N 77.653 -21.219 60.406 -4.083 -0.011 4.846 H261 KOS 88 KOS H262 2H26 H 0 0 N N N 76.076 -21.845 59.606 -5.091 -0.271 3.402 H262 KOS 89 KOS H263 3H26 H 0 0 N N N 75.965 -21.411 61.201 -4.082 -1.594 4.033 H263 KOS 90 KOS H11 H11 H 0 1 N N N 77.717 -23.923 58.957 -2.409 -1.663 1.670 H11 KOS 91 KOS HO5 HO5 H 0 1 N N N 79.033 -22.011 59.695 -4.636 -1.829 2.184 HO5 KOS 92 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KOS C27 O6 SING N N 1 KOS C27 H271 SING N N 2 KOS C27 H272 SING N N 3 KOS C27 H273 SING N N 4 KOS O6 C12 SING N N 5 KOS C12 C13 SING N N 6 KOS C12 C11 SING N N 7 KOS C12 H12 SING N N 8 KOS C13 C14 SING N N 9 KOS C13 H131 SING N N 10 KOS C13 H132 SING N N 11 KOS C14 C28 SING N N 12 KOS C14 C15 SING N N 13 KOS C14 H14 SING N N 14 KOS C28 H281 SING N N 15 KOS C28 H282 SING N N 16 KOS C28 H283 SING N N 17 KOS C15 C16 SING N N 18 KOS C15 H151 SING N N 19 KOS C15 H152 SING N N 20 KOS C16 C17 DOUB N N 21 KOS C16 C21 SING N N 22 KOS C17 N29 SING N N 23 KOS C17 C18 SING N N 24 KOS N29 C30 SING N N 25 KOS N29 H29 SING N N 26 KOS C30 C31 SING N N 27 KOS C30 H301 SING N N 28 KOS C30 H302 SING N N 29 KOS C31 N32 SING N N 30 KOS C31 H311 SING N N 31 KOS C31 H312 SING N N 32 KOS N32 C33 SING N N 33 KOS N32 C34 SING N N 34 KOS C33 H331 SING N N 35 KOS C33 H332 SING N N 36 KOS C33 H333 SING N N 37 KOS C34 H341 SING N N 38 KOS C34 H342 SING N N 39 KOS C34 H343 SING N N 40 KOS C18 O8 DOUB N N 41 KOS C18 C19 SING N N 42 KOS C19 C20 DOUB N N 43 KOS C19 H19 SING N N 44 KOS C20 N1 SING N N 45 KOS C20 C21 SING N N 46 KOS N1 C1 SING N N 47 KOS N1 HN1 SING N N 48 KOS C1 O1 DOUB N N 49 KOS C1 C2 SING N N 50 KOS C2 C22 SING N N 51 KOS C2 C3 DOUB N E 52 KOS C22 H221 SING N N 53 KOS C22 H222 SING N N 54 KOS C22 H223 SING N N 55 KOS C3 C4 SING N N 56 KOS C3 H3 SING N N 57 KOS C4 C5 DOUB N Z 58 KOS C4 H4 SING N N 59 KOS C5 C6 SING N N 60 KOS C5 H5 SING N N 61 KOS C6 O2 SING N N 62 KOS C6 C7 SING N N 63 KOS C6 H6 SING N N 64 KOS O2 C23 SING N N 65 KOS C23 H231 SING N N 66 KOS C23 H232 SING N N 67 KOS C23 H233 SING N N 68 KOS C7 O3 SING N N 69 KOS C7 C8 SING N N 70 KOS C7 H7 SING N N 71 KOS O3 C24 SING N N 72 KOS C24 N2 SING N N 73 KOS C24 O4 DOUB N N 74 KOS N2 HN21 SING N N 75 KOS N2 HN22 SING N N 76 KOS C8 C25 SING N N 77 KOS C8 C9 DOUB N E 78 KOS C25 H251 SING N N 79 KOS C25 H252 SING N N 80 KOS C25 H253 SING N N 81 KOS C9 C10 SING N N 82 KOS C9 H9 SING N N 83 KOS C10 C26 SING N N 84 KOS C10 C11 SING N N 85 KOS C10 H10 SING N N 86 KOS C26 H261 SING N N 87 KOS C26 H262 SING N N 88 KOS C26 H263 SING N N 89 KOS C11 O5 SING N N 90 KOS C11 H11 SING N N 91 KOS O5 HO5 SING N N 92 KOS C21 O9 DOUB N N 93 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KOS SMILES ACDLabs 10.04 "O=C1C(NCCN(C)C)=C2C(=O)C(=C1)NC(=O)C(=CC=CC(OC)C(OC(=O)N)C(=CC(C)C(O)C(OC)CC(C)C2)C)C" KOS SMILES_CANONICAL CACTVS 3.341 "CO[C@H]1C[C@H](C)CC2=C(NCCN(C)C)C(=O)C=C(NC(=O)\C(=C\C=C/[C@H](OC)[C@@H](OC(N)=O)\C(=C\[C@H](C)[C@H]1O)C)C)C2=O" KOS SMILES CACTVS 3.341 "CO[CH]1C[CH](C)CC2=C(NCCN(C)C)C(=O)C=C(NC(=O)C(=CC=C[CH](OC)[CH](OC(N)=O)C(=C[CH](C)[CH]1O)C)C)C2=O" KOS SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H]1C[C@@H]([C@@H]([C@H](\C=C(\[C@@H]([C@H](\C=C/C=C(/C(=O)NC2=CC(=O)C(=C(C1)C2=O)NCCN(C)C)\C)OC)OC(=O)N)/C)C)O)OC" KOS SMILES "OpenEye OEToolkits" 1.5.0 "CC1CC(C(C(C=C(C(C(C=CC=C(C(=O)NC2=CC(=O)C(=C(C1)C2=O)NCCN(C)C)C)OC)OC(=O)N)C)C)O)OC" KOS InChI InChI 1.03 "InChI=1S/C32H48N4O8/c1-18-14-22-27(34-12-13-36(5)6)24(37)17-23(29(22)39)35-31(40)19(2)10-9-11-25(42-7)30(44-32(33)41)21(4)16-20(3)28(38)26(15-18)43-8/h9-11,16-18,20,25-26,28,30,34,38H,12-15H2,1-8H3,(H2,33,41)(H,35,40)/b11-9-,19-10+,21-16+/t18-,20+,25+,26+,28-,30+/m1/s1" KOS InChIKey InChI 1.03 KUFRQPKVAWMTJO-LMZWQJSESA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier KOS "SYSTEMATIC NAME" ACDLabs 10.04 "(4E,6Z,8S,9S,10E,12S,13R,14S,16R)-19-{[2-(dimethylamino)ethyl]amino}-13-hydroxy-8,14-dimethoxy-4,10,12,16-tetramethyl-3,20,22-trioxo-2-azabicyclo[16.3.1]docosa-1(21),4,6,10,18-pentaen-9-yl carbamate" KOS "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(3R,5S,6R,7S,8E,10S,11S,12Z,14E)-21-(2-dimethylaminoethylamino)-6-hydroxy-5,11-dimethoxy-3,7,9,15-tetramethyl-16,20,22-trioxo-17-azabicyclo[16.3.1]docosa-1(21),8,12,14,18-pentaen-10-yl] carbamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KOS "Create component" 2003-03-20 RCSB KOS "Modify descriptor" 2011-06-04 RCSB KOS "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id KOS _pdbx_chem_comp_synonyms.name 17-DMAG _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##