data_KRU # _chem_comp.id KRU _chem_comp.name "1,3-dihydroisoindol-2-yl-[(2R,4S)-4-phenylpyrrolidin-1-ium-2-yl]methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H21 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2022-06-07 _chem_comp.pdbx_modified_date 2022-09-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 293.383 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KRU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8A0B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KRU C2 C1 C 0 1 N N N 21.437 -17.869 -0.815 -0.610 1.449 -0.123 C2 KRU 1 KRU C3 C2 C 0 1 N N R 21.006 -19.313 -0.658 0.449 1.093 0.888 C3 KRU 2 KRU C5 C3 C 0 1 N N S 19.434 -20.336 0.911 2.565 -0.046 1.185 C5 KRU 3 KRU C6 C4 C 0 1 N N N 18.673 -19.693 -0.229 2.709 1.459 1.478 C6 KRU 4 KRU C8 C5 C 0 1 Y N N 18.764 -20.273 2.275 3.687 -0.516 0.296 C8 KRU 5 KRU C10 C6 C 0 1 Y N N 18.924 -20.164 4.678 4.916 -0.354 -1.752 C10 KRU 6 KRU C11 C7 C 0 1 Y N N 17.560 -20.091 4.772 5.746 -1.377 -1.335 C11 KRU 7 KRU C12 C8 C 0 1 Y N N 16.792 -20.169 3.653 5.543 -1.974 -0.105 C12 KRU 8 KRU C13 C9 C 0 1 Y N N 17.387 -20.237 2.392 4.513 -1.543 0.711 C13 KRU 9 KRU C15 C10 C 0 1 N N N 23.771 -18.617 -0.523 -2.201 -0.263 0.805 C15 KRU 10 KRU C16 C11 C 0 1 Y N N 25.023 -17.786 -0.498 -3.602 -0.678 0.434 C16 KRU 11 KRU C19 C12 C 0 1 Y N N 27.069 -15.918 -0.541 -6.126 -1.069 -0.628 C19 KRU 12 KRU C21 C13 C 0 1 Y N N 24.733 -16.442 -0.689 -4.023 0.080 -0.641 C21 KRU 13 KRU C22 C14 C 0 1 N N N 23.252 -16.233 -0.842 -2.919 1.031 -1.028 C22 KRU 14 KRU O1 O1 O 0 1 N N N 20.614 -16.988 -1.013 -0.396 2.313 -0.947 O1 KRU 15 KRU C4 C15 C 0 1 N N N 20.787 -19.637 0.832 1.208 -0.187 0.457 C4 KRU 16 KRU N7 N1 N 1 1 N N N 19.690 -19.555 -1.318 1.514 2.127 0.917 N7 KRU 17 KRU C9 C16 C 0 1 Y N N 19.522 -20.233 3.429 3.887 0.077 -0.936 C9 KRU 18 KRU N14 N2 N 0 1 N N N 22.733 -17.598 -0.733 -1.793 0.803 -0.116 N14 KRU 19 KRU C17 C17 C 0 1 Y N N 26.328 -18.206 -0.359 -4.444 -1.633 0.978 C17 KRU 20 KRU C18 C18 C 0 1 Y N N 27.355 -17.267 -0.356 -5.705 -1.828 0.447 C18 KRU 21 KRU C20 C19 C 0 1 Y N N 25.753 -15.502 -0.694 -5.286 -0.116 -1.172 C20 KRU 22 KRU H23 H1 H 0 1 N N N 21.773 -19.983 -1.075 0.007 0.964 1.876 H23 KRU 23 KRU H24 H2 H 0 1 N N N 19.588 -21.396 0.660 2.557 -0.613 2.116 H24 KRU 24 KRU H29 H3 H 0 1 N N N 18.284 -18.708 0.068 2.756 1.625 2.555 H29 KRU 25 KRU H30 H4 H 0 1 N N N 17.840 -20.334 -0.552 3.611 1.845 1.003 H30 KRU 26 KRU H32 H5 H 0 1 N N N 19.531 -20.168 5.572 5.075 0.113 -2.713 H32 KRU 27 KRU H33 H6 H 0 1 N N N 17.093 -19.971 5.738 6.554 -1.711 -1.970 H33 KRU 28 KRU H34 H7 H 0 1 N N N 15.716 -20.178 3.740 6.192 -2.774 0.221 H34 KRU 29 KRU H35 H8 H 0 1 N N N 16.770 -20.262 1.506 4.355 -2.009 1.672 H35 KRU 30 KRU H37 H9 H 0 1 N N N 23.624 -19.147 0.430 -2.185 0.109 1.830 H37 KRU 31 KRU H36 H10 H 0 1 N N N 23.790 -19.344 -1.348 -1.526 -1.113 0.711 H36 KRU 32 KRU H40 H11 H 0 1 N N N 27.870 -15.194 -0.566 -7.111 -1.220 -1.044 H40 KRU 33 KRU H43 H12 H 0 1 N N N 23.011 -15.792 -1.820 -2.608 0.838 -2.054 H43 KRU 34 KRU H42 H13 H 0 1 N N N 22.855 -15.591 -0.042 -3.267 2.059 -0.934 H42 KRU 35 KRU H28 H14 H 0 1 N N N 21.583 -20.301 1.201 0.681 -1.080 0.794 H28 KRU 36 KRU H27 H15 H 0 1 N N N 20.776 -18.712 1.427 1.350 -0.206 -0.623 H27 KRU 37 KRU H26 H16 H 0 1 N N N 19.456 -18.784 -1.911 1.706 2.455 -0.017 H26 KRU 38 KRU H25 H17 H 0 1 N N N 19.727 -20.394 -1.861 1.236 2.897 1.508 H25 KRU 39 KRU H31 H18 H 0 1 N N N 20.599 -20.256 3.357 3.238 0.877 -1.262 H31 KRU 40 KRU H38 H19 H 0 1 N N N 26.552 -19.257 -0.253 -4.116 -2.226 1.819 H38 KRU 41 KRU H39 H20 H 0 1 N N N 28.376 -17.586 -0.210 -6.361 -2.572 0.873 H39 KRU 42 KRU H41 H21 H 0 1 N N N 25.525 -14.453 -0.816 -5.615 0.477 -2.012 H41 KRU 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KRU N7 C3 SING N N 1 KRU N7 C6 SING N N 2 KRU O1 C2 DOUB N N 3 KRU C22 N14 SING N N 4 KRU C22 C21 SING N N 5 KRU C2 N14 SING N N 6 KRU C2 C3 SING N N 7 KRU N14 C15 SING N N 8 KRU C20 C21 DOUB Y N 9 KRU C20 C19 SING Y N 10 KRU C21 C16 SING Y N 11 KRU C3 C4 SING N N 12 KRU C19 C18 DOUB Y N 13 KRU C15 C16 SING N N 14 KRU C16 C17 DOUB Y N 15 KRU C17 C18 SING Y N 16 KRU C6 C5 SING N N 17 KRU C4 C5 SING N N 18 KRU C5 C8 SING N N 19 KRU C8 C13 DOUB Y N 20 KRU C8 C9 SING Y N 21 KRU C13 C12 SING Y N 22 KRU C9 C10 DOUB Y N 23 KRU C12 C11 DOUB Y N 24 KRU C10 C11 SING Y N 25 KRU C3 H23 SING N N 26 KRU C5 H24 SING N N 27 KRU C6 H29 SING N N 28 KRU C6 H30 SING N N 29 KRU C10 H32 SING N N 30 KRU C11 H33 SING N N 31 KRU C12 H34 SING N N 32 KRU C13 H35 SING N N 33 KRU C15 H37 SING N N 34 KRU C15 H36 SING N N 35 KRU C19 H40 SING N N 36 KRU C22 H43 SING N N 37 KRU C22 H42 SING N N 38 KRU C4 H28 SING N N 39 KRU C4 H27 SING N N 40 KRU N7 H26 SING N N 41 KRU N7 H25 SING N N 42 KRU C9 H31 SING N N 43 KRU C17 H38 SING N N 44 KRU C18 H39 SING N N 45 KRU C20 H41 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KRU InChI InChI 1.06 "InChI=1S/C19H20N2O/c22-19(21-12-15-8-4-5-9-16(15)13-21)18-10-17(11-20-18)14-6-2-1-3-7-14/h1-9,17-18,20H,10-13H2/p+1/t17-,18-/m1/s1" KRU InChIKey InChI 1.06 CNNYTLGFUDHERQ-QZTJIDSGSA-O KRU SMILES_CANONICAL CACTVS 3.385 "O=C([C@H]1C[C@H](C[NH2+]1)c2ccccc2)N3Cc4ccccc4C3" KRU SMILES CACTVS 3.385 "O=C([CH]1C[CH](C[NH2+]1)c2ccccc2)N3Cc4ccccc4C3" KRU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)[C@@H]2C[C@@H]([NH2+]C2)C(=O)N3Cc4ccccc4C3" KRU SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C2CC([NH2+]C2)C(=O)N3Cc4ccccc4C3" # _pdbx_chem_comp_identifier.comp_id KRU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1,3-dihydroisoindol-2-yl-[(2~{R},4~{S})-4-phenylpyrrolidin-1-ium-2-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KRU "Create component" 2022-06-07 PDBE KRU "Modify descriptor" 2022-08-22 RCSB KRU "Initial release" 2022-09-21 RCSB #