data_KSI # _chem_comp.id KSI _chem_comp.name "1-[(3S)-4-[(3-chlorophenyl)methyl]-3-(2-methylpropyl)piperazin-1-yl]ethan-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H25 Cl N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-14 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 308.846 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KSI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GBB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KSI N1 N1 N 0 1 N N N N N N 9.264 -2.179 22.572 0.558 -0.333 0.296 N1 KSI 1 KSI C4 C1 C 0 1 N N S N N N 8.292 -3.288 22.387 1.882 -0.551 0.894 C4 KSI 2 KSI C5 C2 C 0 1 N N N N N N 7.086 -2.769 21.623 2.961 -0.011 -0.050 C5 KSI 3 KSI C6 C3 C 0 1 N N N N N N 8.486 -1.152 20.447 1.290 1.708 -0.842 C6 KSI 4 KSI C7 C4 C 0 1 N N N N N N 9.675 -1.587 21.281 0.277 1.100 0.133 C7 KSI 5 KSI C8 C5 C 0 1 N N N N N N 10.444 -2.574 23.358 -0.492 -0.988 1.086 C8 KSI 6 KSI C10 C6 C 0 1 Y N N N N N 11.728 -0.515 24.049 -2.278 -1.764 -0.486 C10 KSI 7 KSI C13 C7 C 0 1 Y N N N N N 13.602 -0.925 22.085 -3.809 0.479 0.036 C13 KSI 8 KSI C15 C8 C 0 1 N N N N N N 7.127 -2.822 19.178 3.573 2.358 -0.224 C15 KSI 9 KSI C16 C9 C 0 1 N N N N N N 8.078 -2.686 18.011 3.228 3.787 -0.554 C16 KSI 10 KSI O O1 O 0 1 N N N N N N 6.041 -3.340 19.080 4.686 2.078 0.170 O KSI 11 KSI N N2 N 0 1 N N N N N N 7.536 -2.260 20.330 2.645 1.390 -0.366 N KSI 12 KSI C3 C10 C 0 1 N N N N N N 7.915 -3.982 23.697 2.101 -2.049 1.115 C3 KSI 13 KSI C1 C11 C 0 1 N N N N N N 6.911 -5.134 23.578 2.191 -2.757 -0.238 C1 KSI 14 KSI C2 C12 C 0 1 N N N N N N 7.319 -6.179 22.532 2.563 -4.225 -0.023 C2 KSI 15 KSI C C13 C 0 1 N N N N N N 6.696 -5.793 24.930 0.838 -2.673 -0.949 C KSI 16 KSI C9 C14 C 0 1 Y N N N N N 11.614 -1.626 23.226 -1.823 -0.808 0.402 C9 KSI 17 KSI C14 C15 C 0 1 Y N N N N N 12.578 -1.836 22.244 -2.588 0.313 0.664 C14 KSI 18 KSI CL CL1 CL 0 0 N N N N N N 14.803 -1.216 20.856 -4.771 1.887 0.364 CL KSI 19 KSI C12 C16 C 0 1 Y N N N N N 13.710 0.191 22.885 -4.262 -0.476 -0.858 C12 KSI 20 KSI C11 C17 C 0 1 Y N N N N N 12.765 0.388 23.880 -3.496 -1.596 -1.118 C11 KSI 21 KSI H2 H2 H 0 1 N N N N N N 8.774 -4.045 21.751 1.939 -0.030 1.850 H2 KSI 22 KSI H3 H3 H 0 1 N N N N N N 6.607 -1.960 22.193 3.934 -0.066 0.437 H3 KSI 23 KSI H4 H4 H 0 1 N N N N N N 6.365 -3.586 21.469 2.976 -0.602 -0.966 H4 KSI 24 KSI H5 H5 H 0 1 N N N N N N 8.830 -0.858 19.445 1.142 1.285 -1.836 H5 KSI 25 KSI H6 H6 H 0 1 N N N N N N 7.993 -0.296 20.931 1.157 2.790 -0.881 H6 KSI 26 KSI H7 H7 H 0 1 N N N N N N 10.250 -2.335 20.715 -0.731 1.231 -0.261 H7 KSI 27 KSI H8 H8 H 0 1 N N N N N N 10.309 -0.710 21.479 0.357 1.599 1.099 H8 KSI 28 KSI H9 H9 H 0 1 N N N N N N 10.154 -2.621 24.418 -0.270 -2.052 1.174 H9 KSI 29 KSI H10 H10 H 0 1 N N N N N N 10.766 -3.571 23.022 -0.531 -0.542 2.080 H10 KSI 30 KSI H11 H11 H 0 1 N N N N N N 11.000 -0.352 24.830 -1.680 -2.640 -0.691 H11 KSI 31 KSI H12 H12 H 0 1 N N N N N N 7.620 -3.122 17.111 2.404 4.117 0.079 H12 KSI 32 KSI H13 H13 H 0 1 N N N N N N 8.292 -1.621 17.834 4.098 4.420 -0.378 H13 KSI 33 KSI H14 H14 H 0 1 N N N N N N 9.015 -3.215 18.238 2.933 3.858 -1.600 H14 KSI 34 KSI H15 H15 H 0 1 N N N N N N 8.837 -4.383 24.144 3.027 -2.203 1.668 H15 KSI 35 KSI H16 H16 H 0 1 N N N N N N 7.482 -3.225 24.367 1.266 -2.459 1.684 H16 KSI 36 KSI H17 H17 H 0 1 N N N N N N 5.950 -4.704 23.259 2.953 -2.275 -0.850 H17 KSI 37 KSI H18 H18 H 0 1 N N N N N N 6.562 -6.976 22.494 1.801 -4.707 0.589 H18 KSI 38 KSI H19 H19 H 0 1 N N N N N N 7.396 -5.699 21.545 2.628 -4.729 -0.987 H19 KSI 39 KSI H20 H20 H 0 1 N N N N N N 8.293 -6.611 22.806 3.527 -4.285 0.483 H20 KSI 40 KSI H21 H21 H 0 1 N N N N N N 6.404 -5.031 25.668 0.055 -3.036 -0.283 H21 KSI 41 KSI H22 H22 H 0 1 N N N N N N 5.899 -6.547 24.848 0.633 -1.638 -1.219 H22 KSI 42 KSI H23 H23 H 0 1 N N N N N N 7.629 -6.278 25.254 0.862 -3.286 -1.849 H23 KSI 43 KSI H24 H24 H 0 1 N N N N N N 12.525 -2.708 21.609 -2.232 1.060 1.358 H24 KSI 44 KSI H25 H25 H 0 1 N N N N N N 14.514 0.898 22.740 -5.216 -0.347 -1.348 H25 KSI 45 KSI H26 H26 H 0 1 N N N N N N 12.838 1.250 24.527 -3.849 -2.341 -1.816 H26 KSI 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KSI C16 C15 SING N N 1 KSI O C15 DOUB N N 2 KSI C15 N SING N N 3 KSI N C6 SING N N 4 KSI N C5 SING N N 5 KSI C6 C7 SING N N 6 KSI CL C13 SING N N 7 KSI C7 N1 SING N N 8 KSI C5 C4 SING N N 9 KSI C13 C14 DOUB Y N 10 KSI C13 C12 SING Y N 11 KSI C14 C9 SING Y N 12 KSI C4 N1 SING N N 13 KSI C4 C3 SING N N 14 KSI C2 C1 SING N N 15 KSI N1 C8 SING N N 16 KSI C12 C11 DOUB Y N 17 KSI C9 C8 SING N N 18 KSI C9 C10 DOUB Y N 19 KSI C1 C3 SING N N 20 KSI C1 C SING N N 21 KSI C11 C10 SING Y N 22 KSI C4 H2 SING N N 23 KSI C5 H3 SING N N 24 KSI C5 H4 SING N N 25 KSI C6 H5 SING N N 26 KSI C6 H6 SING N N 27 KSI C7 H7 SING N N 28 KSI C7 H8 SING N N 29 KSI C8 H9 SING N N 30 KSI C8 H10 SING N N 31 KSI C10 H11 SING N N 32 KSI C16 H12 SING N N 33 KSI C16 H13 SING N N 34 KSI C16 H14 SING N N 35 KSI C3 H15 SING N N 36 KSI C3 H16 SING N N 37 KSI C1 H17 SING N N 38 KSI C2 H18 SING N N 39 KSI C2 H19 SING N N 40 KSI C2 H20 SING N N 41 KSI C H21 SING N N 42 KSI C H22 SING N N 43 KSI C H23 SING N N 44 KSI C14 H24 SING N N 45 KSI C12 H25 SING N N 46 KSI C11 H26 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KSI SMILES ACDLabs 12.01 "CC(C)CC1CN(CCN1Cc1cc(Cl)ccc1)C(C)=O" KSI InChI InChI 1.06 "InChI=1S/C17H25ClN2O/c1-13(2)9-17-12-19(14(3)21)7-8-20(17)11-15-5-4-6-16(18)10-15/h4-6,10,13,17H,7-9,11-12H2,1-3H3/t17-/m0/s1" KSI InChIKey InChI 1.06 NQWZHKWPOKKPNU-KRWDZBQOSA-N KSI SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H]1CN(CCN1Cc2cccc(Cl)c2)C(C)=O" KSI SMILES CACTVS 3.385 "CC(C)C[CH]1CN(CCN1Cc2cccc(Cl)c2)C(C)=O" KSI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@H]1CN(CCN1Cc2cccc(c2)Cl)C(=O)C" KSI SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC1CN(CCN1Cc2cccc(c2)Cl)C(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier KSI "SYSTEMATIC NAME" ACDLabs 12.01 "1-[(3S)-4-[(3-chlorophenyl)methyl]-3-(2-methylpropyl)piperazin-1-yl]ethan-1-one" KSI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[(3~{S})-4-[(3-chlorophenyl)methyl]-3-(2-methylpropyl)piperazin-1-yl]ethanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KSI "Create component" 2023-08-14 RCSB KSI "Initial release" 2023-11-08 RCSB KSI "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id KSI _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C16 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #