data_KTO # _chem_comp.id KTO _chem_comp.name "(2~{S})-2-azanyl-3-[(2~{R},3~{S})-2-oxidanyl-3-[[(1~{S},5~{R})-3-oxidanylidene-9-azabicyclo[3.3.1]nonan-9-yl]oxy]-1,2-dihydroindol-3-yl]propanal" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H25 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-05-12 _chem_comp.pdbx_modified_date 2016-09-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 359.420 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KTO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5B59 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KTO O20 O1 O 0 1 N N N -5.816 -20.757 19.152 -4.386 1.922 0.697 O20 KTO 1 KTO C17 C1 C 0 1 N N N -5.844 -21.085 17.969 -3.295 1.506 0.387 C17 KTO 2 KTO C15 C2 C 0 1 N N N -4.738 -21.985 17.456 -2.296 1.068 1.437 C15 KTO 3 KTO C14 C3 C 0 1 N N R -5.267 -22.979 16.426 -1.764 -0.315 1.050 C14 KTO 4 KTO C11 C4 C 0 1 N N N -6.990 -20.615 17.074 -2.880 1.399 -1.065 C11 KTO 5 KTO C13 C5 C 0 1 N N S -7.310 -21.649 15.990 -2.314 -0.004 -1.302 C13 KTO 6 KTO C12 C6 C 0 1 N N N -8.227 -22.764 16.492 -3.434 -1.038 -1.200 C12 KTO 7 KTO C16 C7 C 0 1 N N N -7.505 -23.684 17.478 -4.000 -1.036 0.223 C16 KTO 8 KTO C10 C8 C 0 1 N N N -6.101 -24.126 17.015 -2.874 -1.355 1.195 C10 KTO 9 KTO N18 N1 N 0 1 N N N -6.070 -22.238 15.426 -1.264 -0.292 -0.327 N18 KTO 10 KTO O19 O2 O 0 1 N N N -5.347 -21.272 14.831 -0.145 0.640 -0.470 O19 KTO 11 KTO C1 C9 C 0 1 N N S -4.925 -21.492 13.475 1.101 0.009 -0.773 C1 KTO 12 KTO C23 C10 C 0 1 N N N -4.340 -20.210 12.903 2.201 1.059 -0.944 C23 KTO 13 KTO C22 C11 C 0 1 N N S -5.204 -18.971 13.247 2.481 1.729 0.402 C22 KTO 14 KTO N21 N2 N 0 1 N N N -6.524 -18.938 12.596 1.268 2.410 0.873 N21 KTO 15 KTO C24 C12 C 0 1 N N N -4.447 -17.732 12.888 3.592 2.735 0.241 C24 KTO 16 KTO O25 O3 O 0 1 N N N -3.537 -17.466 13.649 3.392 3.899 0.493 O25 KTO 17 KTO C2 C13 C 0 1 N N R -6.060 -22.093 12.614 0.973 -0.850 -2.041 C2 KTO 18 KTO O49 O4 O 0 1 N N N -5.925 -21.580 11.265 1.917 -0.424 -3.026 O49 KTO 19 KTO N3 N3 N 0 1 N N N -5.920 -23.564 12.732 1.271 -2.218 -1.609 N3 KTO 20 KTO C4 C14 C 0 1 Y N N -4.666 -23.862 13.168 1.554 -2.239 -0.243 C4 KTO 21 KTO C5 C15 C 0 1 Y N N -3.981 -22.649 13.600 1.474 -0.972 0.315 C5 KTO 22 KTO C6 C16 C 0 1 Y N N -3.992 -25.075 13.227 1.888 -3.320 0.576 C6 KTO 23 KTO C7 C17 C 0 1 Y N N -2.669 -25.069 13.726 2.133 -3.126 1.918 C7 KTO 24 KTO C8 C18 C 0 1 Y N N -2.029 -23.890 14.159 2.050 -1.859 2.465 C8 KTO 25 KTO C9 C19 C 0 1 Y N N -2.697 -22.669 14.114 1.720 -0.783 1.661 C9 KTO 26 KTO H1 H1 H 0 1 N N N -4.306 -22.540 18.302 -1.472 1.780 1.480 H1 KTO 27 KTO H2 H2 H 0 1 N N N -3.959 -21.365 16.989 -2.785 1.014 2.410 H2 KTO 28 KTO H3 H3 H 0 1 N N N -4.402 -23.424 15.914 -0.941 -0.578 1.714 H3 KTO 29 KTO H4 H4 H 0 1 N N N -6.704 -19.668 16.593 -3.746 1.559 -1.707 H4 KTO 30 KTO H5 H5 H 0 1 N N N -7.885 -20.456 17.693 -2.117 2.146 -1.285 H5 KTO 31 KTO H6 H6 H 0 1 N N N -7.838 -21.125 15.180 -1.879 -0.048 -2.300 H6 KTO 32 KTO H7 H7 H 0 1 N N N -9.096 -22.313 16.994 -4.226 -0.787 -1.906 H7 KTO 33 KTO H8 H8 H 0 1 N N N -8.569 -23.359 15.633 -3.039 -2.026 -1.433 H8 KTO 34 KTO H9 H9 H 0 1 N N N -7.401 -23.151 18.435 -4.418 -0.055 0.449 H9 KTO 35 KTO H10 H10 H 0 1 N N N -8.120 -24.584 17.624 -4.780 -1.793 0.307 H10 KTO 36 KTO H11 H11 H 0 1 N N N -6.216 -24.905 16.247 -2.474 -2.346 0.979 H11 KTO 37 KTO H12 H12 H 0 1 N N N -5.563 -24.541 17.880 -3.262 -1.333 2.213 H12 KTO 38 KTO H13 H13 H 0 1 N N N -4.277 -20.306 11.809 3.109 0.578 -1.307 H13 KTO 39 KTO H14 H14 H 0 1 N N N -3.331 -20.065 13.317 1.876 1.811 -1.663 H14 KTO 40 KTO H15 H15 H 0 1 N N N -5.357 -18.971 14.336 2.779 0.973 1.129 H15 KTO 41 KTO H16 H16 H 0 1 N N N -7.034 -19.765 12.833 0.972 3.116 0.216 H16 KTO 42 KTO H17 H17 H 0 1 N N N -7.029 -18.134 12.908 0.527 1.748 1.050 H17 KTO 43 KTO H19 H19 H 0 1 N N N -4.688 -17.126 12.027 4.565 2.415 -0.099 H19 KTO 44 KTO H22 H22 H 0 1 N N N -7.026 -21.781 13.039 -0.040 -0.791 -2.437 H22 KTO 45 KTO H23 H23 H 0 1 N N N -6.027 -20.635 11.273 1.912 -0.958 -3.832 H23 KTO 46 KTO H24 H24 H 0 1 N N N -6.592 -23.912 13.385 1.271 -2.996 -2.189 H24 KTO 47 KTO H25 H25 H 0 1 N N N -4.462 -25.992 12.903 1.953 -4.313 0.155 H25 KTO 48 KTO H26 H26 H 0 1 N N N -2.129 -26.003 13.777 2.390 -3.967 2.546 H26 KTO 49 KTO H27 H27 H 0 1 N N N -1.015 -23.934 14.528 2.243 -1.709 3.517 H27 KTO 50 KTO H18 H18 H 0 1 N N N -2.226 -21.764 14.470 1.656 0.208 2.086 H18 KTO 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KTO O49 C2 SING N N 1 KTO N21 C22 SING N N 2 KTO C2 N3 SING N N 3 KTO C2 C1 SING N N 4 KTO N3 C4 SING N N 5 KTO C24 C22 SING N N 6 KTO C24 O25 DOUB N N 7 KTO C23 C22 SING N N 8 KTO C23 C1 SING N N 9 KTO C4 C6 DOUB Y N 10 KTO C4 C5 SING Y N 11 KTO C6 C7 SING Y N 12 KTO C1 C5 SING N N 13 KTO C1 O19 SING N N 14 KTO C5 C9 DOUB Y N 15 KTO C7 C8 DOUB Y N 16 KTO C9 C8 SING Y N 17 KTO O19 N18 SING N N 18 KTO N18 C13 SING N N 19 KTO N18 C14 SING N N 20 KTO C13 C12 SING N N 21 KTO C13 C11 SING N N 22 KTO C14 C10 SING N N 23 KTO C14 C15 SING N N 24 KTO C12 C16 SING N N 25 KTO C10 C16 SING N N 26 KTO C11 C17 SING N N 27 KTO C15 C17 SING N N 28 KTO C17 O20 DOUB N N 29 KTO C15 H1 SING N N 30 KTO C15 H2 SING N N 31 KTO C14 H3 SING N N 32 KTO C11 H4 SING N N 33 KTO C11 H5 SING N N 34 KTO C13 H6 SING N N 35 KTO C12 H7 SING N N 36 KTO C12 H8 SING N N 37 KTO C16 H9 SING N N 38 KTO C16 H10 SING N N 39 KTO C10 H11 SING N N 40 KTO C10 H12 SING N N 41 KTO C23 H13 SING N N 42 KTO C23 H14 SING N N 43 KTO C22 H15 SING N N 44 KTO N21 H16 SING N N 45 KTO N21 H17 SING N N 46 KTO C24 H19 SING N N 47 KTO C2 H22 SING N N 48 KTO O49 H23 SING N N 49 KTO N3 H24 SING N N 50 KTO C6 H25 SING N N 51 KTO C7 H26 SING N N 52 KTO C8 H27 SING N N 53 KTO C9 H18 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KTO InChI InChI 1.03 "InChI=1S/C19H25N3O4/c20-12(11-23)10-19(16-6-1-2-7-17(16)21-18(19)25)26-22-13-4-3-5-14(22)9-15(24)8-13/h1-2,6-7,11-14,18,21,25H,3-5,8-10,20H2/t12-,13-,14+,18+,19-/m0/s1" KTO InChIKey InChI 1.03 VZSJTEDYMNRNSN-ZNROUJSISA-N KTO SMILES_CANONICAL CACTVS 3.385 "N[C@@H](C[C@@]1(ON2[C@H]3CCC[C@@H]2CC(=O)C3)[C@@H](O)Nc4ccccc14)C=O" KTO SMILES CACTVS 3.385 "N[CH](C[C]1(ON2[CH]3CCC[CH]2CC(=O)C3)[CH](O)Nc4ccccc14)C=O" KTO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1ccc2c(c1)[C@]([C@H](N2)O)(C[C@@H](C=O)N)ON3[C@@H]4CCC[C@H]3CC(=O)C4" KTO SMILES "OpenEye OEToolkits" 2.0.4 "c1ccc2c(c1)C(C(N2)O)(CC(C=O)N)ON3C4CCCC3CC(=O)C4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier KTO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "(2~{S})-2-azanyl-3-[(2~{R},3~{S})-2-oxidanyl-3-[[(1~{S},5~{R})-3-oxidanylidene-9-azabicyclo[3.3.1]nonan-9-yl]oxy]-1,2-dihydroindol-3-yl]propanal" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KTO "Create component" 2016-05-12 RCSB KTO "Initial release" 2016-09-14 RCSB #