data_KU2 # _chem_comp.id KU2 _chem_comp.name ;2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-5-hydroxy-6-oxo-N-(2-phenoxyethyl)-1,6-dihydropyrimidine-4 -carboxamide ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H25 Cl N4 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms SRI-30023 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-06-27 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 529.008 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KU2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5WF3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KU2 C10 C1 C 0 1 N N N 128.662 193.089 282.344 2.688 1.522 0.097 C10 KU2 1 KU2 C13 C2 C 0 1 N N N 133.855 195.273 280.628 -4.462 -2.216 0.681 C13 KU2 2 KU2 C14 C3 C 0 1 Y N N 130.361 198.328 282.004 6.994 -3.355 -1.574 C14 KU2 3 KU2 C17 C4 C 0 1 Y N N 128.442 196.377 281.495 5.137 -1.807 -0.226 C17 KU2 4 KU2 C18 C5 C 0 1 Y N N 129.680 196.324 280.885 5.624 -1.394 -1.460 C18 KU2 5 KU2 C19 C6 C 0 1 Y N N 130.634 197.294 281.139 6.555 -2.166 -2.128 C19 KU2 6 KU2 C20 C7 C 0 1 Y N N 130.589 194.113 276.951 -9.100 -2.628 -0.972 C20 KU2 7 KU2 C21 C8 C 0 1 Y N N 130.688 193.026 277.788 -8.400 -2.037 -2.008 C21 KU2 8 KU2 C22 C9 C 0 1 Y N N 131.415 193.111 278.964 -7.057 -1.750 -1.861 C22 KU2 9 KU2 C24 C10 C 0 1 Y N N 131.942 195.389 278.461 -7.114 -2.647 0.366 C24 KU2 10 KU2 C25 C11 C 0 1 Y N N 131.213 195.291 277.287 -8.457 -2.933 0.213 C25 KU2 11 KU2 C1 C12 C 0 1 N N N 129.804 194.728 285.050 0.181 3.273 0.316 C1 KU2 12 KU2 C11 C13 C 0 1 N N N 127.391 193.908 282.482 3.608 0.515 -0.544 C11 KU2 13 KU2 C12 C14 C 0 1 N N N 134.346 195.132 282.045 -2.962 -1.921 0.614 C12 KU2 14 KU2 C15 C15 C 0 1 Y N N 129.134 198.405 282.624 6.505 -3.775 -0.351 C15 KU2 15 KU2 C16 C16 C 0 1 Y N N 128.177 197.440 282.371 5.578 -3.005 0.325 C16 KU2 16 KU2 C2 C17 C 0 1 N N N 131.710 196.014 284.604 -1.276 1.484 0.527 C2 KU2 17 KU2 C23 C18 C 0 1 Y N N 132.041 194.295 279.295 -6.410 -2.054 -0.672 C23 KU2 18 KU2 C3 C19 C 0 1 N N N 131.302 196.992 285.462 -2.302 2.331 0.913 C3 KU2 19 KU2 C4 C20 C 0 1 N N N 130.060 196.820 286.159 -2.011 3.768 0.986 C4 KU2 20 KU2 C5 C21 C 0 1 N N N 132.982 196.109 283.835 -1.507 0.025 0.433 C5 KU2 21 KU2 C6 C22 C 0 1 N N N 130.797 191.888 285.068 2.731 4.546 -1.987 C6 KU2 22 KU2 C7 C23 C 0 1 N N N 129.457 192.277 285.679 1.493 4.853 -1.104 C7 KU2 23 KU2 C8 C24 C 0 1 N N S 129.042 193.449 284.779 1.567 3.763 -0.014 C8 KU2 24 KU2 C9 C25 C 0 1 N N N 130.496 191.905 283.578 2.777 2.999 -1.932 C9 KU2 25 KU2 N1 N1 N 0 1 N N N 130.966 194.916 284.411 -0.065 1.998 0.242 N1 KU2 26 KU2 N2 N2 N 0 1 N N N 129.336 195.666 285.925 -0.759 4.177 0.684 N2 KU2 27 KU2 N3 N3 N 0 1 N N N 133.231 195.117 282.980 -2.750 -0.472 0.593 N3 KU2 28 KU2 N4 N4 N 0 1 N N N 129.364 192.851 283.469 2.372 2.658 -0.556 N4 KU2 29 KU2 O1 O1 O 0 1 N N N 132.048 198.092 285.646 -3.534 1.849 1.212 O1 KU2 30 KU2 O2 O2 O 0 1 N N N 129.645 197.671 286.955 -2.869 4.567 1.319 O2 KU2 31 KU2 O3 O3 O 0 1 N N N 133.768 197.049 283.953 -0.576 -0.725 0.213 O3 KU2 32 KU2 O4 O4 O 0 1 N N N 129.015 192.610 281.259 2.229 1.309 1.199 O4 KU2 33 KU2 O5 O5 O 0 1 N N N 132.756 194.373 280.463 -5.089 -1.773 -0.524 O5 KU2 34 KU2 S1 S1 S 0 1 N N N 127.216 195.157 281.171 3.955 -0.821 0.632 S1 KU2 35 KU2 CL1 CL1 CL 0 0 N N N 126.642 197.562 283.166 4.973 -3.526 1.867 CL1 KU2 36 KU2 H1 H1 H 0 1 N N N 134.660 195.016 279.924 -4.616 -3.289 0.798 H1 KU2 37 KU2 H2 H2 H 0 1 N N N 133.525 196.306 280.446 -4.898 -1.691 1.531 H2 KU2 38 KU2 H3 H3 H 0 1 N N N 131.111 199.081 282.197 7.719 -3.959 -2.101 H3 KU2 39 KU2 H4 H4 H 0 1 N N N 129.906 195.518 280.203 5.281 -0.466 -1.894 H4 KU2 40 KU2 H5 H5 H 0 1 N N N 131.598 197.239 280.655 6.940 -1.841 -3.083 H5 KU2 41 KU2 H6 H6 H 0 1 N N N 130.023 194.041 276.034 -10.151 -2.847 -1.088 H6 KU2 42 KU2 H7 H7 H 0 1 N N N 130.196 192.101 277.527 -8.904 -1.800 -2.934 H7 KU2 43 KU2 H8 H8 H 0 1 N N N 131.491 192.255 279.618 -6.511 -1.289 -2.670 H8 KU2 44 KU2 H9 H9 H 0 1 N N N 132.430 196.317 278.722 -6.613 -2.886 1.293 H9 KU2 45 KU2 H10 H10 H 0 1 N N N 131.134 196.146 276.631 -9.006 -3.394 1.021 H10 KU2 46 KU2 H11 H11 H 0 1 N N N 127.406 194.419 283.456 3.131 0.102 -1.433 H11 KU2 47 KU2 H12 H12 H 0 1 N N N 126.527 193.228 282.438 4.541 1.003 -0.826 H12 KU2 48 KU2 H13 H13 H 0 1 N N N 134.909 194.191 282.140 -2.468 -2.348 1.487 H13 KU2 49 KU2 H14 H14 H 0 1 N N N 135.005 195.979 282.284 -2.545 -2.363 -0.291 H14 KU2 50 KU2 H15 H15 H 0 1 N N N 128.920 199.216 283.305 6.847 -4.706 0.076 H15 KU2 51 KU2 H16 H16 H 0 1 N N N 131.109 190.887 285.399 2.579 4.897 -3.008 H16 KU2 52 KU2 H17 H17 H 0 1 N N N 131.578 192.619 285.324 3.634 4.980 -1.559 H17 KU2 53 KU2 H18 H18 H 0 1 N N N 129.569 192.594 286.726 1.571 5.846 -0.661 H18 KU2 54 KU2 H19 H19 H 0 1 N N N 128.734 191.450 285.622 0.574 4.761 -1.683 H19 KU2 55 KU2 H20 H20 H 0 1 N N N 127.960 193.626 284.870 2.041 4.165 0.881 H20 KU2 56 KU2 H21 H21 H 0 1 N N N 130.209 190.904 283.223 2.076 2.573 -2.650 H21 KU2 57 KU2 H22 H22 H 0 1 N N N 131.364 192.262 283.005 3.787 2.642 -2.132 H22 KU2 58 KU2 H23 H23 H 0 1 N N N 128.467 195.518 286.398 -0.532 5.119 0.731 H23 KU2 59 KU2 H24 H24 H 0 1 N N N 132.622 194.324 282.981 -3.503 0.130 0.693 H24 KU2 60 KU2 H25 H25 H 0 1 N N N 132.836 198.033 285.118 -4.171 2.529 1.469 H25 KU2 61 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KU2 C20 C25 DOUB Y N 1 KU2 C20 C21 SING Y N 2 KU2 C25 C24 SING Y N 3 KU2 C21 C22 DOUB Y N 4 KU2 C24 C23 DOUB Y N 5 KU2 C22 C23 SING Y N 6 KU2 C23 O5 SING N N 7 KU2 O5 C13 SING N N 8 KU2 C13 C12 SING N N 9 KU2 C18 C19 DOUB Y N 10 KU2 C18 C17 SING Y N 11 KU2 C19 C14 SING Y N 12 KU2 S1 C17 SING N N 13 KU2 S1 C11 SING N N 14 KU2 O4 C10 DOUB N N 15 KU2 C17 C16 DOUB Y N 16 KU2 C14 C15 DOUB Y N 17 KU2 C12 N3 SING N N 18 KU2 C10 C11 SING N N 19 KU2 C10 N4 SING N N 20 KU2 C16 C15 SING Y N 21 KU2 C16 CL1 SING N N 22 KU2 N3 C5 SING N N 23 KU2 N4 C9 SING N N 24 KU2 N4 C8 SING N N 25 KU2 C9 C6 SING N N 26 KU2 C5 O3 DOUB N N 27 KU2 C5 C2 SING N N 28 KU2 N1 C2 SING N N 29 KU2 N1 C1 DOUB N N 30 KU2 C2 C3 DOUB N N 31 KU2 C8 C1 SING N N 32 KU2 C8 C7 SING N N 33 KU2 C1 N2 SING N N 34 KU2 C6 C7 SING N N 35 KU2 C3 O1 SING N N 36 KU2 C3 C4 SING N N 37 KU2 N2 C4 SING N N 38 KU2 C4 O2 DOUB N N 39 KU2 C13 H1 SING N N 40 KU2 C13 H2 SING N N 41 KU2 C14 H3 SING N N 42 KU2 C18 H4 SING N N 43 KU2 C19 H5 SING N N 44 KU2 C20 H6 SING N N 45 KU2 C21 H7 SING N N 46 KU2 C22 H8 SING N N 47 KU2 C24 H9 SING N N 48 KU2 C25 H10 SING N N 49 KU2 C11 H11 SING N N 50 KU2 C11 H12 SING N N 51 KU2 C12 H13 SING N N 52 KU2 C12 H14 SING N N 53 KU2 C15 H15 SING N N 54 KU2 C6 H16 SING N N 55 KU2 C6 H17 SING N N 56 KU2 C7 H18 SING N N 57 KU2 C7 H19 SING N N 58 KU2 C8 H20 SING N N 59 KU2 C9 H21 SING N N 60 KU2 C9 H22 SING N N 61 KU2 N2 H23 SING N N 62 KU2 N3 H24 SING N N 63 KU2 O1 H25 SING N N 64 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KU2 SMILES ACDLabs 12.01 "C(CSc1c(cccc1)Cl)(N4C(C=3NC(C(=C(C(=O)NCCOc2ccccc2)N=3)O)=O)CCC4)=O" KU2 InChI InChI 1.03 "InChI=1S/C25H25ClN4O5S/c26-17-9-4-5-11-19(17)36-15-20(31)30-13-6-10-18(30)23-28-21(22(32)25(34)29-23)24(33)27-12-14-35-16-7-2-1-3-8-16/h1-5,7-9,11,18,32H,6,10,12-15H2,(H,27,33)(H,28,29,34)/t18-/m0/s1" KU2 InChIKey InChI 1.03 SAJTUABEFGSMCM-SFHVURJKSA-N KU2 SMILES_CANONICAL CACTVS 3.385 "OC1=C(N=C(NC1=O)[C@@H]2CCCN2C(=O)CSc3ccccc3Cl)C(=O)NCCOc4ccccc4" KU2 SMILES CACTVS 3.385 "OC1=C(N=C(NC1=O)[CH]2CCCN2C(=O)CSc3ccccc3Cl)C(=O)NCCOc4ccccc4" KU2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)OCCNC(=O)C2=C(C(=O)NC(=N2)[C@@H]3CCCN3C(=O)CSc4ccccc4Cl)O" KU2 SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)OCCNC(=O)C2=C(C(=O)NC(=N2)C3CCCN3C(=O)CSc4ccccc4Cl)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier KU2 "SYSTEMATIC NAME" ACDLabs 12.01 "2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-5-hydroxy-6-oxo-N-(2-phenoxyethyl)-1,6-dihydropyrimidine-4-carboxamide" KU2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[(2~{S})-1-[2-(2-chlorophenyl)sulfanylethanoyl]pyrrolidin-2-yl]-5-oxidanyl-6-oxidanylidene-~{N}-(2-phenoxyethyl)-1~{H}-pyrimidine-4-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KU2 "Create component" 2017-06-27 RCSB KU2 "Modify synonyms" 2017-07-12 RCSB KU2 "Initial release" 2017-12-27 RCSB KU2 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id KU2 _pdbx_chem_comp_synonyms.name SRI-30023 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##