data_KZU # _chem_comp.id KZU _chem_comp.name "2-(4,6-dimethylpyrimidin-2-yl)sulfanyl-N-[5-[[3-[[1-(2-methoxyethyl)-1,2,3-triazol-4-yl]methoxy]phenyl]methyl]-1,3-thiazol-2-yl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H27 N7 O3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "triazole-based sirtuin-rearranging ligand (SirReal)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-08 _chem_comp.pdbx_modified_date 2023-11-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 525.646 _chem_comp.one_letter_code ? _chem_comp.three_letter_code KZU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8OWZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal KZU C25 C1 C 0 1 N N N N N N 4.285 16.107 8.102 -5.709 0.971 -1.605 C25 KZU 1 KZU C23 C2 C 0 1 Y N N N N N 2.536 17.245 6.914 -3.994 2.184 -0.491 C23 KZU 2 KZU C22 C3 C 0 1 Y N N N N N 2.977 16.769 5.691 -4.030 3.089 -1.541 C22 KZU 3 KZU C21 C4 C 0 1 Y N N N N N 2.191 16.976 4.569 -3.187 4.184 -1.538 C21 KZU 4 KZU C19 C5 C 0 1 Y N N N N N 0.536 18.125 5.891 -2.266 3.474 0.557 C19 KZU 5 KZU C32 C6 C 0 1 N N N N N N -1.459 12.353 8.296 -10.927 -4.486 1.675 C32 KZU 6 KZU C35 C7 C 0 1 Y N N N N N 1.325 17.918 7.018 -3.111 2.381 0.561 C35 KZU 7 KZU C17 C8 C 0 1 Y N N N N N -0.769 20.091 6.846 -0.003 2.995 1.397 C17 KZU 8 KZU C16 C9 C 0 1 Y N N N N N -0.428 21.333 6.408 1.039 3.531 0.759 C16 KZU 9 KZU C5 C10 C 0 1 Y N N N N N 1.369 24.896 11.315 7.663 -1.051 -0.433 C5 KZU 10 KZU C7 C11 C 0 1 Y N N N N N 1.097 25.921 9.313 7.984 -3.234 0.224 C7 KZU 11 KZU C3 C12 C 0 1 N N N N N N -0.915 23.436 11.938 5.161 -0.280 0.362 C3 KZU 12 KZU C2 C13 C 0 1 N N N N N N -1.093 22.348 10.895 4.102 0.791 0.431 C2 KZU 13 KZU C18 C14 C 0 1 N N N N N N -0.792 18.843 6.013 -1.307 3.688 1.700 C18 KZU 14 KZU C14 C15 C 0 1 Y N N N N N -0.759 21.878 8.511 1.946 1.522 1.091 C14 KZU 15 KZU C10 C16 C 0 1 Y N N N N N 2.858 26.518 10.797 9.681 -2.034 -0.943 C10 KZU 16 KZU C11 C17 C 0 1 N N N N N N 4.057 27.330 11.189 11.054 -1.954 -1.559 C11 KZU 17 KZU C20 C18 C 0 1 Y N N N N N 0.982 17.647 4.668 -2.308 4.378 -0.488 C20 KZU 18 KZU C26 C19 C 0 1 Y N N N N N 3.639 14.800 8.415 -6.549 -0.268 -1.430 C26 KZU 19 KZU C27 C20 C 0 1 Y N N N N N 3.203 13.812 7.581 -6.507 -1.134 -0.391 C27 KZU 20 KZU C29 C21 C 0 1 N N N N N N 2.101 11.582 8.034 -7.742 -3.241 0.189 C29 KZU 21 KZU C30 C22 C 0 1 N N N N N N 0.679 11.736 7.561 -9.240 -3.255 0.499 C30 KZU 22 KZU C8 C23 C 0 1 N N N N N N 0.347 26.035 8.018 7.478 -4.482 0.901 C8 KZU 23 KZU C9 C24 C 0 1 Y N N N N N 2.201 26.707 9.593 9.254 -3.202 -0.330 C9 KZU 24 KZU N12 N1 N 0 1 Y N N N N N 2.442 25.597 11.678 8.872 -0.988 -0.972 N12 KZU 25 KZU N13 N2 N 0 1 N N N N N N -0.732 22.705 9.622 2.922 0.534 1.028 N13 KZU 26 KZU N15 N3 N 0 1 Y N N N N N -0.418 22.351 7.341 2.069 2.719 0.610 N15 KZU 27 KZU N28 N4 N 0 1 Y N N N N N 2.695 12.869 8.393 -7.429 -2.088 -0.659 N28 KZU 28 KZU N33 N5 N 0 1 Y N N N N N 2.801 13.238 9.679 -7.985 -1.807 -1.785 N33 KZU 29 KZU N34 N6 N 0 1 Y N N N N N 3.378 14.419 9.691 -7.486 -0.724 -2.269 N34 KZU 30 KZU N6 N7 N 0 1 Y N N N N N 0.664 24.996 10.184 7.223 -2.154 0.157 N6 KZU 31 KZU O1 O1 O 0 1 N N N N N N -1.587 21.260 11.175 4.314 1.884 -0.051 O1 KZU 32 KZU O24 O2 O 0 1 N N N N N N 3.247 17.083 8.080 -4.827 1.110 -0.489 O24 KZU 33 KZU O31 O3 O 0 1 N N N N N N -0.128 12.045 8.672 -9.546 -4.379 1.326 O31 KZU 34 KZU S36 S1 S 0 1 Y N N N N N -1.113 20.170 8.544 0.409 1.334 1.816 S36 KZU 35 KZU S4 S2 S 0 1 N N N N N N 0.799 23.752 12.511 6.619 0.366 -0.493 S4 KZU 36 KZU H1 H1 H 0 1 N N N N N N 4.781 16.059 7.121 -5.125 0.888 -2.522 H1 KZU 37 KZU H2 H2 H 0 1 N N N N N N 5.025 16.359 8.876 -6.358 1.845 -1.666 H2 KZU 38 KZU H3 H3 H 0 1 N N N N N N 3.918 16.245 5.613 -4.716 2.938 -2.362 H3 KZU 39 KZU H4 H4 H 0 1 N N N N N N 2.523 16.611 3.608 -3.214 4.889 -2.356 H4 KZU 40 KZU H5 H5 H 0 1 N N N N N N -2.049 12.587 9.194 -11.525 -4.582 0.769 H5 KZU 41 KZU H6 H6 H 0 1 N N N N N N -1.458 13.222 7.622 -11.076 -5.365 2.303 H6 KZU 42 KZU H7 H7 H 0 1 N N N N N N -1.903 11.489 7.780 -11.234 -3.594 2.220 H7 KZU 43 KZU H8 H8 H 0 1 N N N N N N 0.994 18.283 7.979 -3.085 1.681 1.383 H8 KZU 44 KZU H9 H9 H 0 1 N N N N N N -0.176 21.515 5.374 1.040 4.548 0.393 H9 KZU 45 KZU H10 H10 H 0 1 N N N N N N -1.303 24.373 11.512 5.437 -0.584 1.372 H10 KZU 46 KZU H11 H11 H 0 1 N N N N N N -1.515 23.157 12.817 4.772 -1.141 -0.183 H11 KZU 47 KZU H12 H12 H 0 1 N N N N N N -1.126 19.115 5.001 -1.130 4.755 1.830 H12 KZU 48 KZU H13 H13 H 0 1 N N N N N N -1.515 18.147 6.463 -1.733 3.275 2.614 H13 KZU 49 KZU H14 H14 H 0 1 N N N N N N 4.406 27.013 12.183 11.769 -1.613 -0.810 H14 KZU 50 KZU H15 H15 H 0 1 N N N N N N 4.860 27.177 10.453 11.348 -2.940 -1.920 H15 KZU 51 KZU H16 H16 H 0 1 N N N N N N 3.785 28.395 11.218 11.038 -1.252 -2.392 H16 KZU 52 KZU H17 H17 H 0 1 N N N N N N 0.381 17.799 3.784 -1.649 5.233 -0.488 H17 KZU 53 KZU H18 H18 H 0 1 N N N N N N 3.255 13.792 6.502 -5.867 -1.076 0.477 H18 KZU 54 KZU H19 H19 H 0 1 N N N N N N 2.114 10.925 8.916 -7.179 -3.171 1.120 H19 KZU 55 KZU H20 H20 H 0 1 N N N N N N 2.697 11.127 7.229 -7.470 -4.159 -0.332 H20 KZU 56 KZU H21 H21 H 0 1 N N N N N N 0.619 12.548 6.821 -9.512 -2.336 1.020 H21 KZU 57 KZU H22 H22 H 0 1 N N N N N N 0.336 10.797 7.103 -9.803 -3.324 -0.432 H22 KZU 58 KZU H23 H23 H 0 1 N N N N N N -0.473 25.302 8.003 7.739 -4.453 1.959 H23 KZU 59 KZU H24 H24 H 0 1 N N N N N N -0.067 27.050 7.922 6.395 -4.539 0.795 H24 KZU 60 KZU H25 H25 H 0 1 N N N N N N 1.031 25.837 7.180 7.935 -5.357 0.438 H25 KZU 61 KZU H26 H26 H 0 1 N N N N N N 2.542 27.451 8.888 9.896 -4.070 -0.289 H26 KZU 62 KZU H27 H27 H 0 1 N N N N N N -0.422 23.645 9.483 2.753 -0.340 1.413 H27 KZU 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal KZU C21 C20 DOUB Y N 1 KZU C21 C22 SING Y N 2 KZU C20 C19 SING Y N 3 KZU C22 C23 DOUB Y N 4 KZU C19 C18 SING N N 5 KZU C19 C35 DOUB Y N 6 KZU C18 C17 SING N N 7 KZU C16 C17 DOUB Y N 8 KZU C16 N15 SING Y N 9 KZU C17 S36 SING Y N 10 KZU C23 C35 SING Y N 11 KZU C23 O24 SING N N 12 KZU N15 C14 DOUB Y N 13 KZU C30 C29 SING N N 14 KZU C30 O31 SING N N 15 KZU C27 N28 SING Y N 16 KZU C27 C26 DOUB Y N 17 KZU C8 C7 SING N N 18 KZU C29 N28 SING N N 19 KZU O24 C25 SING N N 20 KZU C25 C26 SING N N 21 KZU C32 O31 SING N N 22 KZU N28 N33 SING Y N 23 KZU C26 N34 SING Y N 24 KZU C14 S36 SING Y N 25 KZU C14 N13 SING N N 26 KZU C7 C9 DOUB Y N 27 KZU C7 N6 SING Y N 28 KZU C9 C10 SING Y N 29 KZU N13 C2 SING N N 30 KZU N33 N34 DOUB Y N 31 KZU N6 C5 DOUB Y N 32 KZU C10 C11 SING N N 33 KZU C10 N12 DOUB Y N 34 KZU C2 O1 DOUB N N 35 KZU C2 C3 SING N N 36 KZU C5 N12 SING Y N 37 KZU C5 S4 SING N N 38 KZU C3 S4 SING N N 39 KZU C25 H1 SING N N 40 KZU C25 H2 SING N N 41 KZU C22 H3 SING N N 42 KZU C21 H4 SING N N 43 KZU C32 H5 SING N N 44 KZU C32 H6 SING N N 45 KZU C32 H7 SING N N 46 KZU C35 H8 SING N N 47 KZU C16 H9 SING N N 48 KZU C3 H10 SING N N 49 KZU C3 H11 SING N N 50 KZU C18 H12 SING N N 51 KZU C18 H13 SING N N 52 KZU C11 H14 SING N N 53 KZU C11 H15 SING N N 54 KZU C11 H16 SING N N 55 KZU C20 H17 SING N N 56 KZU C27 H18 SING N N 57 KZU C29 H19 SING N N 58 KZU C29 H20 SING N N 59 KZU C30 H21 SING N N 60 KZU C30 H22 SING N N 61 KZU C8 H23 SING N N 62 KZU C8 H24 SING N N 63 KZU C8 H25 SING N N 64 KZU C9 H26 SING N N 65 KZU N13 H27 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor KZU InChI InChI 1.06 "InChI=1S/C24H27N7O3S2/c1-16-9-17(2)27-24(26-16)35-15-22(32)28-23-25-12-21(36-23)11-18-5-4-6-20(10-18)34-14-19-13-31(30-29-19)7-8-33-3/h4-6,9-10,12-13H,7-8,11,14-15H2,1-3H3,(H,25,28,32)" KZU InChIKey InChI 1.06 MAUGCLAAQLDMTD-UHFFFAOYSA-N KZU SMILES_CANONICAL CACTVS 3.385 "COCCn1cc(COc2cccc(Cc3sc(NC(=O)CSc4nc(C)cc(C)n4)nc3)c2)nn1" KZU SMILES CACTVS 3.385 "COCCn1cc(COc2cccc(Cc3sc(NC(=O)CSc4nc(C)cc(C)n4)nc3)c2)nn1" KZU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)SCC(=O)Nc2ncc(s2)Cc3cccc(c3)OCc4cn(nn4)CCOC)C" KZU SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)SCC(=O)Nc2ncc(s2)Cc3cccc(c3)OCc4cn(nn4)CCOC)C" # _pdbx_chem_comp_identifier.comp_id KZU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-(4,6-dimethylpyrimidin-2-yl)sulfanyl-~{N}-[5-[[3-[[1-(2-methoxyethyl)-1,2,3-triazol-4-yl]methoxy]phenyl]methyl]-1,3-thiazol-2-yl]ethanamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id KZU _pdbx_chem_comp_synonyms.name "triazole-based sirtuin-rearranging ligand (SirReal)" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site KZU "Create component" 2023-05-03 PDBE KZU "Initial release" 2023-11-15 RCSB #