data_L4L # _chem_comp.id L4L _chem_comp.name "[(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{S})-2-acetamido-3-oxidanylidene-pent-4-enoxy]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H21 N O11 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-15 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 399.371 _chem_comp.one_letter_code ? _chem_comp.three_letter_code L4L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6Z6Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal L4L C01 C1 C 0 1 N N N 8.041 -5.856 18.037 4.163 -2.130 -2.574 C01 L4L 1 L4L C02 C2 C 0 1 N N N 7.321 -5.130 17.182 4.033 -1.795 -1.289 C02 L4L 2 L4L C03 C3 C 0 1 N N N 6.128 -5.243 16.294 3.746 -0.409 -0.920 C03 L4L 3 L4L C04 C4 C 0 1 N N S 5.861 -3.964 15.486 3.599 -0.030 0.531 C04 L4L 4 L4L C06 C5 C 0 1 N N N 6.157 -1.616 16.377 4.874 2.033 0.762 C06 L4L 5 L4L C07 C6 C 0 1 N N N 4.666 -1.538 16.773 4.951 3.532 0.901 C07 L4L 6 L4L C09 C7 C 0 1 N N N 6.216 -4.495 14.075 2.247 -0.521 1.052 C09 L4L 7 L4L C11 C8 C 0 1 N N R 8.070 -4.476 12.787 -0.109 -0.412 0.623 C11 L4L 8 L4L C12 C9 C 0 1 N N R 9.542 -4.087 12.732 -1.149 0.288 -0.255 C12 L4L 9 L4L C14 C10 C 0 1 N N S 9.949 -4.039 11.301 -2.548 -0.193 0.142 C14 L4L 10 L4L C20 C11 C 0 1 N N S 9.614 -5.258 10.526 -2.608 -1.718 0.010 C20 L4L 11 L4L C22 C12 C 0 1 N N R 8.121 -5.599 10.664 -1.512 -2.341 0.878 C22 L4L 12 L4L C23 C13 C 0 1 N N N 7.752 -6.862 9.977 -1.526 -3.861 0.705 C23 L4L 13 L4L N05 N1 N 0 1 N N N 6.713 -2.821 15.745 3.674 1.427 0.666 N05 L4L 14 L4L O08 O1 O 0 1 N N N 6.861 -0.685 16.595 5.891 1.373 0.738 O08 L4L 15 L4L O10 O2 O 0 1 N N N 7.659 -4.622 14.067 1.202 -0.010 0.221 O10 L4L 16 L4L O13 O3 O 0 1 N N N 9.654 -2.826 13.375 -1.059 1.702 -0.067 O13 L4L 17 L4L O15 O4 O 0 1 N N N 11.392 -3.811 11.342 -3.520 0.400 -0.722 O15 L4L 18 L4L O17 O5 O 0 1 N N N 11.028 -1.641 10.032 -5.218 2.005 -1.042 O17 L4L 19 L4L O18 O6 O 0 1 N N N 12.247 -3.430 8.933 -4.329 1.451 1.228 O18 L4L 20 L4L O19 O7 O 0 1 N N N 13.243 -2.253 10.893 -3.119 2.780 -0.298 O19 L4L 21 L4L O21 O8 O 0 1 N N N 10.487 -6.357 10.944 -2.404 -2.087 -1.355 O21 L4L 22 L4L O24 O9 O 0 1 N N N 6.346 -7.105 10.063 -0.583 -4.451 1.601 O24 L4L 23 L4L O25 O10 O 0 1 N N N 7.880 -5.746 12.114 -0.240 -1.828 0.477 O25 L4L 24 L4L O26 O11 O 0 1 N N N 5.620 -6.255 16.024 3.625 0.436 -1.783 O26 L4L 25 L4L S16 S1 S 0 1 N N N 12.010 -2.754 10.238 -4.151 1.669 -0.165 S16 L4L 26 L4L H1 H1 H 0 1 N N N 7.769 -6.882 18.237 4.375 -3.154 -2.846 H1 L4L 27 L4L H011 H2 H 0 0 N N N 8.896 -5.418 18.530 4.052 -1.379 -3.342 H011 L4L 28 L4L H2 H4 H 0 1 N N N 7.737 -4.136 17.108 4.140 -2.547 -0.521 H2 L4L 29 L4L H041 H6 H 0 0 N N N 4.795 -3.696 15.534 4.400 -0.491 1.109 H041 L4L 30 L4L H071 H7 H 0 0 N N N 4.459 -0.560 17.233 5.995 3.837 0.965 H071 L4L 31 L4L H073 H8 H 0 0 N N N 4.042 -1.661 15.876 4.488 4.001 0.033 H073 L4L 32 L4L H072 H9 H 0 0 N N N 4.436 -2.337 17.493 4.426 3.841 1.805 H072 L4L 33 L4L H092 H10 H 0 0 N N N 5.887 -3.785 13.302 2.224 -1.611 1.035 H092 L4L 34 L4L H091 H11 H 0 0 N N N 5.742 -5.472 13.900 2.102 -0.171 2.074 H091 L4L 35 L4L H111 H12 H 0 0 N N N 7.485 -3.699 12.273 -0.270 -0.138 1.666 H111 L4L 36 L4L H121 H13 H 0 0 N N N 10.137 -4.846 13.261 -0.964 0.048 -1.302 H121 L4L 37 L4L H141 H14 H 0 0 N N N 9.463 -3.174 10.826 -2.754 0.094 1.173 H141 L4L 38 L4L H201 H15 H 0 0 N N N 9.807 -5.050 9.463 -3.583 -2.075 0.342 H201 L4L 39 L4L H221 H16 H 0 0 N N N 7.522 -4.767 10.265 -1.691 -2.092 1.924 H221 L4L 40 L4L H231 H17 H 0 0 N N N 8.290 -7.698 10.449 -2.523 -4.242 0.925 H231 L4L 41 L4L H232 H18 H 0 0 N N N 8.040 -6.792 8.918 -1.259 -4.112 -0.322 H232 L4L 42 L4L H051 H19 H 0 0 N N N 7.680 -2.852 15.494 2.861 1.954 0.685 H051 L4L 43 L4L H131 H20 H 0 0 N N N 9.384 -2.908 14.282 -0.197 2.075 -0.294 H131 L4L 44 L4L H211 H21 H 0 0 N N N 11.395 -6.098 10.840 -2.425 -3.041 -1.512 H211 L4L 45 L4L H241 H22 H 0 0 N N N 6.137 -7.917 9.617 -0.538 -5.416 1.546 H241 L4L 46 L4L H3 H3 H 0 1 N N N 13.161 -1.320 11.051 -3.421 3.638 0.030 H3 L4L 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal L4L O18 S16 DOUB N N 1 L4L C23 O24 SING N N 2 L4L C23 C22 SING N N 3 L4L O17 S16 DOUB N N 4 L4L S16 O19 SING N N 5 L4L S16 O15 SING N N 6 L4L C20 C22 SING N N 7 L4L C20 O21 SING N N 8 L4L C20 C14 SING N N 9 L4L C22 O25 SING N N 10 L4L C14 O15 SING N N 11 L4L C14 C12 SING N N 12 L4L O25 C11 SING N N 13 L4L C12 C11 SING N N 14 L4L C12 O13 SING N N 15 L4L C11 O10 SING N N 16 L4L O10 C09 SING N N 17 L4L C09 C04 SING N N 18 L4L C04 N05 SING N N 19 L4L C04 C03 SING N N 20 L4L N05 C06 SING N N 21 L4L O26 C03 DOUB N N 22 L4L C03 C02 SING N N 23 L4L C06 O08 DOUB N N 24 L4L C06 C07 SING N N 25 L4L C02 C01 DOUB N N 26 L4L C01 H1 SING N N 27 L4L C01 H011 SING N N 28 L4L C02 H2 SING N N 29 L4L C04 H041 SING N N 30 L4L C07 H071 SING N N 31 L4L C07 H073 SING N N 32 L4L C07 H072 SING N N 33 L4L C09 H092 SING N N 34 L4L C09 H091 SING N N 35 L4L C11 H111 SING N N 36 L4L C12 H121 SING N N 37 L4L C14 H141 SING N N 38 L4L C20 H201 SING N N 39 L4L C22 H221 SING N N 40 L4L C23 H231 SING N N 41 L4L C23 H232 SING N N 42 L4L N05 H051 SING N N 43 L4L O13 H131 SING N N 44 L4L O21 H211 SING N N 45 L4L O24 H241 SING N N 46 L4L O19 H3 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor L4L InChI InChI 1.06 "InChI=1S/C13H21NO11S/c1-3-8(17)7(14-6(2)16)5-23-13-11(19)12(25-26(20,21)22)10(18)9(4-15)24-13/h3,7,9-13,15,18-19H,1,4-5H2,2H3,(H,14,16)(H,20,21,22)/t7-,9+,10-,11+,12-,13+/m0/s1" L4L InChIKey InChI 1.06 XMURRHZYXOXPBZ-FJUAUIJYSA-N L4L SMILES_CANONICAL CACTVS 3.385 "CC(=O)N[C@@H](CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](O[S](O)(=O)=O)[C@H]1O)C(=O)C=C" L4L SMILES CACTVS 3.385 "CC(=O)N[CH](CO[CH]1O[CH](CO)[CH](O)[CH](O[S](O)(=O)=O)[CH]1O)C(=O)C=C" L4L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H](CO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)OS(=O)(=O)O)O)C(=O)C=C" L4L SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC(COC1C(C(C(C(O1)CO)O)OS(=O)(=O)O)O)C(=O)C=C" # _pdbx_chem_comp_identifier.comp_id L4L _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{S})-2-acetamido-3-oxidanylidene-pent-4-enoxy]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site L4L "Create component" 2022-06-15 PDBE L4L "Initial release" 2022-07-20 RCSB L4L "Modify descriptor" 2022-08-22 RCSB #