data_L6N # _chem_comp.id L6N _chem_comp.name "(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C7 H14 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-11-14 _chem_comp.pdbx_modified_date 2023-08-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 194.182 _chem_comp.one_letter_code ? _chem_comp.three_letter_code L6N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8HB5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal L6N C4 C1 C 0 1 N N S 32.427 -27.405 -12.013 0.083 -1.273 0.252 C4 L6N 1 L6N C5 C2 C 0 1 N N R 32.455 -26.205 -11.071 -0.860 -0.183 -0.265 C5 L6N 2 L6N C6 C3 C 0 1 N N N 33.585 -25.285 -11.527 -2.272 -0.436 0.265 C6 L6N 3 L6N C3 C4 C 0 1 N N S 31.200 -28.281 -11.768 1.506 -0.980 -0.233 C3 L6N 4 L6N CAM C5 C 0 1 N N N 34.223 -23.050 -11.448 -4.528 0.362 0.122 CAM L6N 5 L6N O6 O1 O 0 1 N N N 33.618 -24.111 -10.769 -3.174 0.512 -0.310 O6 L6N 6 L6N O5 O2 O 0 1 N N N 31.247 -25.508 -11.138 -0.403 1.093 0.186 O5 L6N 7 L6N C1 C6 C 0 1 N N R 30.155 -26.265 -10.707 0.904 1.442 -0.276 C1 L6N 8 L6N O1 O3 O 0 1 N N N 29.015 -25.452 -10.682 1.250 2.741 0.209 O1 L6N 9 L6N C2 C7 C 0 1 N N R 29.930 -27.435 -11.664 1.917 0.418 0.241 C2 L6N 10 L6N O2 O4 O 0 1 N N N 28.890 -28.234 -11.176 3.215 0.731 -0.268 O2 L6N 11 L6N O3 O5 O 0 1 N N N 31.071 -29.183 -12.832 2.405 -1.951 0.306 O3 L6N 12 L6N O4 O6 O 0 1 N N N 33.581 -28.168 -11.801 -0.339 -2.545 -0.245 O4 L6N 13 L6N H1 H1 H 0 1 N N N 32.395 -27.038 -13.049 0.065 -1.284 1.342 H1 L6N 14 L6N H2 H2 H 0 1 N N N 32.658 -26.551 -10.047 -0.872 -0.201 -1.355 H2 L6N 15 L6N H3 H3 H 0 1 N N N 34.544 -25.812 -11.415 -2.586 -1.445 -0.003 H3 L6N 16 L6N H4 H4 H 0 1 N N N 33.431 -25.025 -12.585 -2.277 -0.331 1.350 H4 L6N 17 L6N H5 H5 H 0 1 N N N 31.339 -28.823 -10.821 1.535 -1.019 -1.322 H5 L6N 18 L6N H6 H6 H 0 1 N N N 34.222 -22.156 -10.808 -5.148 1.118 -0.359 H6 L6N 19 L6N H7 H7 H 0 1 N N N 35.260 -23.319 -11.699 -4.888 -0.630 -0.149 H7 L6N 20 L6N H8 H8 H 0 1 N N N 33.664 -22.840 -12.372 -4.580 0.484 1.204 H8 L6N 21 L6N H9 H9 H 0 1 N N N 30.350 -26.672 -9.704 0.915 1.446 -1.366 H9 L6N 22 L6N H10 H10 H 0 1 N N N 29.157 -24.725 -10.087 0.649 3.442 -0.079 H10 L6N 23 L6N H11 H11 H 0 1 N N N 29.683 -27.039 -12.660 1.937 0.442 1.330 H11 L6N 24 L6N H12 H12 H 0 1 N N N 28.097 -27.716 -11.108 3.540 1.604 -0.006 H12 L6N 25 L6N H13 H13 H 0 1 N N N 30.310 -29.734 -12.690 3.325 -1.826 0.038 H13 L6N 26 L6N H14 H14 H 0 1 N N N 34.349 -27.630 -11.952 0.217 -3.283 0.040 H14 L6N 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal L6N O3 C3 SING N N 1 L6N C4 O4 SING N N 2 L6N C4 C3 SING N N 3 L6N C4 C5 SING N N 4 L6N C3 C2 SING N N 5 L6N C2 O2 SING N N 6 L6N C2 C1 SING N N 7 L6N C6 C5 SING N N 8 L6N C6 O6 SING N N 9 L6N CAM O6 SING N N 10 L6N O5 C5 SING N N 11 L6N O5 C1 SING N N 12 L6N C1 O1 SING N N 13 L6N C4 H1 SING N N 14 L6N C5 H2 SING N N 15 L6N C6 H3 SING N N 16 L6N C6 H4 SING N N 17 L6N C3 H5 SING N N 18 L6N CAM H6 SING N N 19 L6N CAM H7 SING N N 20 L6N CAM H8 SING N N 21 L6N C1 H9 SING N N 22 L6N O1 H10 SING N N 23 L6N C2 H11 SING N N 24 L6N O2 H12 SING N N 25 L6N O3 H13 SING N N 26 L6N O4 H14 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor L6N InChI InChI 1.06 "InChI=1S/C7H14O6/c1-12-2-3-4(8)5(9)6(10)7(11)13-3/h3-11H,2H2,1H3/t3-,4-,5+,6-,7-/m1/s1" L6N InChIKey InChI 1.06 QWJKEQVWXSYDJA-XUUWZHRGSA-N L6N SMILES_CANONICAL CACTVS 3.385 "COC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O" L6N SMILES CACTVS 3.385 "COC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O" L6N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC[C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O" L6N SMILES "OpenEye OEToolkits" 2.0.7 "COCC1C(C(C(C(O1)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id L6N _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site L6N "Create component" 2022-11-14 PDBJ L6N "Initial release" 2023-08-09 RCSB #