data_L8L # _chem_comp.id L8L _chem_comp.name "~{N}-[1,1-bis(oxidanylidene)thian-4-yl]-7-[3-methyl-1-(piperidin-4-ylmethyl)indol-5-yl]-4-oxidanylidene-5-propyl-thieno[3,2-c]pyridine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H38 N4 O4 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-21 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 594.788 _chem_comp.one_letter_code ? _chem_comp.three_letter_code L8L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8A7I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal L8L C1 C1 C 0 1 N N N -14.541 9.727 19.745 6.708 -2.198 -2.460 C1 L8L 1 L8L C3 C2 C 0 1 N N N -13.822 8.492 17.734 7.552 -4.432 -2.048 C3 L8L 2 L8L C41 C3 C 0 1 N N N -7.159 -0.003 17.681 2.973 7.298 -1.820 C41 L8L 3 L8L C11 C4 C 0 1 Y N N -12.905 3.237 19.635 3.726 -0.389 1.860 C11 L8L 4 L8L C12 C5 C 0 1 Y N N -13.275 4.395 20.300 3.749 -1.399 0.880 C12 L8L 5 L8L C13 C6 C 0 1 Y N N -11.640 2.649 19.730 2.949 0.753 1.666 C13 L8L 6 L8L C14 C7 C 0 1 Y N N -10.742 3.313 20.578 2.204 0.881 0.501 C14 L8L 7 L8L C15 C8 C 0 1 Y N N -11.133 4.472 21.259 2.234 -0.130 -0.465 C15 L8L 8 L8L C16 C9 C 0 1 Y N N -12.401 5.046 21.136 2.994 -1.250 -0.279 C16 L8L 9 L8L C17 C10 C 0 1 N N N -14.304 1.689 17.988 4.928 -0.108 4.210 C17 L8L 10 L8L C18 C11 C 0 1 N N N -8.527 2.807 19.517 1.962 3.306 0.145 C18 L8L 11 L8L C19 C12 C 0 1 N N N -9.278 2.898 20.647 1.373 2.090 0.282 C19 L8L 12 L8L C20 C13 C 0 1 Y N N -8.628 2.560 21.913 -0.088 1.978 0.213 C20 L8L 13 L8L C21 C14 C 0 1 Y N N -7.312 2.282 21.927 -0.844 3.135 0.005 C21 L8L 14 L8L C22 C15 C 0 1 N N N -6.514 2.255 20.686 -0.113 4.409 -0.133 C22 L8L 15 L8L C25 C16 C 0 1 Y N N -7.868 1.997 24.159 -2.575 1.601 0.120 C25 L8L 16 L8L C26 C17 C 0 1 Y N N -6.876 1.885 23.267 -2.216 2.883 -0.040 C26 L8L 17 L8L C27 C18 C 0 1 N N N -6.447 2.408 18.242 1.921 5.714 -0.198 C27 L8L 18 L8L C28 C19 C 0 1 N N N -5.985 0.956 17.970 2.247 5.959 -1.673 C28 L8L 19 L8L C30 C20 C 0 1 N N N -7.789 1.584 25.580 -3.957 1.112 0.108 C30 L8L 20 L8L N2 N1 N 0 1 N N N -14.432 9.736 18.265 7.061 -3.490 -3.062 N2 L8L 21 L8L C4 C21 C 0 1 N N N -14.503 7.196 18.284 6.450 -4.699 -1.021 C4 L8L 22 L8L C5 C22 C 0 1 N N N -14.589 7.197 19.841 6.043 -3.378 -0.362 C5 L8L 23 L8L C6 C23 C 0 1 N N N -15.340 8.492 20.261 5.581 -2.398 -1.444 C6 L8L 24 L8L C7 C24 C 0 1 N N N -15.265 5.908 20.436 4.899 -3.629 0.622 C7 L8L 25 L8L N8 N2 N 0 1 Y N N -14.558 4.710 20.003 4.590 -2.389 1.339 N8 L8L 26 L8L C9 C25 C 0 1 Y N N -15.092 3.790 19.242 5.094 -2.042 2.562 C9 L8L 27 L8L C10 C26 C 0 1 Y N N -14.165 2.862 18.928 4.616 -0.843 2.931 C10 L8L 28 L8L N23 N3 N 0 1 N N N -7.190 2.462 19.521 1.227 4.432 -0.058 N23 L8L 29 L8L S24 S1 S 0 1 Y N N -9.359 2.519 23.477 -1.157 0.590 0.346 S24 L8L 30 L8L O29 O1 O 0 1 N N N -5.327 1.922 20.769 -0.728 5.445 -0.315 O29 L8L 31 L8L N31 N4 N 0 1 N N N -6.786 0.759 25.931 -4.209 -0.201 0.279 N31 L8L 32 L8L O32 O2 O 0 1 N N N -8.695 1.931 26.339 -4.877 1.891 -0.057 O32 L8L 33 L8L C33 C27 C 0 1 N N N -6.570 0.195 27.269 -5.590 -0.690 0.266 C33 L8L 34 L8L C34 C28 C 0 1 N N N -7.068 -1.283 27.109 -6.032 -0.914 -1.177 C34 L8L 35 L8L C35 C29 C 0 1 N N N -6.826 -2.188 28.350 -7.539 -1.176 -1.228 C35 L8L 36 L8L S36 S2 S 0 1 N N N -5.065 -2.247 28.704 -7.902 -2.715 -0.335 S36 L8L 37 L8L C37 C30 C 0 1 N N N -4.703 -0.490 28.843 -7.135 -2.380 1.278 C37 L8L 38 L8L C38 C31 C 0 1 N N N -5.029 0.201 27.492 -5.671 -1.990 1.062 C38 L8L 39 L8L O39 O3 O 0 1 N N N -4.841 -2.844 30.016 -9.308 -2.816 -0.157 O39 L8L 40 L8L O40 O4 O 0 1 N N N -4.413 -2.768 27.526 -7.200 -3.780 -0.960 O40 L8L 41 L8L H1 H1 H 0 1 N N N -13.529 9.702 20.176 7.581 -1.782 -1.956 H1 L8L 42 L8L H2 H2 H 0 1 N N N -15.055 10.644 20.069 6.377 -1.513 -3.240 H2 L8L 43 L8L H3 H3 H 0 1 N N N -13.912 8.497 16.638 7.835 -5.369 -2.529 H3 L8L 44 L8L H4 H4 H 0 1 N N N -12.758 8.475 18.014 8.421 -4.006 -1.547 H4 L8L 45 L8L H5 H5 H 0 1 N N N -6.770 -1.015 17.496 2.333 8.100 -1.451 H5 L8L 46 L8L H6 H6 H 0 1 N N N -7.837 -0.024 18.547 3.897 7.275 -1.242 H6 L8L 47 L8L H7 H7 H 0 1 N N N -7.708 0.346 16.794 3.205 7.472 -2.871 H7 L8L 48 L8L H8 H8 H 0 1 N N N -11.375 1.751 19.191 2.928 1.531 2.414 H8 L8L 49 L8L H9 H9 H 0 1 N N N -10.417 4.947 21.914 1.651 -0.024 -1.368 H9 L8L 50 L8L H10 H10 H 0 1 N N N -12.677 5.946 21.666 3.008 -2.022 -1.034 H10 L8L 51 L8L H11 H11 H 0 1 N N N -14.043 2.004 16.967 5.801 0.528 4.059 H11 L8L 52 L8L H12 H12 H 0 1 N N N -13.628 0.882 18.307 4.074 0.507 4.493 H12 L8L 53 L8L H13 H13 H 0 1 N N N -15.342 1.326 18.006 5.136 -0.828 5.001 H13 L8L 54 L8L H14 H14 H 0 1 N N N -9.000 3.015 18.569 3.037 3.381 0.202 H14 L8L 55 L8L H15 H15 H 0 1 N N N -5.879 1.545 23.506 -2.940 3.669 -0.193 H15 L8L 56 L8L H16 H16 H 0 1 N N N -5.568 3.067 18.301 2.846 5.692 0.379 H16 L8L 57 L8L H17 H17 H 0 1 N N N -7.102 2.743 17.424 1.282 6.516 0.170 H17 L8L 58 L8L H18 H18 H 0 1 N N N -5.441 0.589 18.853 1.323 5.981 -2.251 H18 L8L 59 L8L H19 H19 H 0 1 N N N -5.312 0.959 17.100 2.887 5.156 -2.042 H19 L8L 60 L8L H20 H20 H 0 1 N N N -13.867 10.514 17.990 7.735 -3.372 -3.803 H20 L8L 61 L8L H22 H22 H 0 1 N N N -15.521 7.127 17.872 5.586 -5.139 -1.520 H22 L8L 62 L8L H23 H23 H 0 1 N N N -13.917 6.323 17.961 6.820 -5.386 -0.260 H23 L8L 63 L8L H24 H24 H 0 1 N N N -13.565 7.254 20.238 6.896 -2.958 0.169 H24 L8L 64 L8L H25 H25 H 0 1 N N N -15.419 8.535 21.357 5.330 -1.442 -0.986 H25 L8L 65 L8L H26 H26 H 0 1 N N N -16.348 8.494 19.821 4.703 -2.802 -1.950 H26 L8L 66 L8L H27 H27 H 0 1 N N N -15.243 5.963 21.534 4.016 -3.963 0.077 H27 L8L 67 L8L H28 H28 H 0 1 N N N -16.309 5.856 20.092 5.196 -4.397 1.337 H28 L8L 68 L8L H29 H29 H 0 1 N N N -16.121 3.776 18.914 5.778 -2.642 3.144 H29 L8L 69 L8L H30 H30 H 0 1 N N N -6.131 0.508 25.219 -3.476 -0.823 0.410 H30 L8L 70 L8L H31 H31 H 0 1 N N N -7.108 0.729 28.066 -6.239 0.055 0.728 H31 L8L 71 L8L H32 H32 H 0 1 N N N -8.149 -1.260 26.907 -5.798 -0.028 -1.768 H32 L8L 72 L8L H33 H33 H 0 1 N N N -6.544 -1.730 26.251 -5.501 -1.772 -1.589 H33 L8L 73 L8L H34 H34 H 0 1 N N N -7.362 -1.774 29.217 -8.069 -0.347 -0.759 H34 L8L 74 L8L H35 H35 H 0 1 N N N -7.194 -3.204 28.142 -7.857 -1.273 -2.266 H35 L8L 75 L8L H36 H36 H 0 1 N N N -3.638 -0.350 29.081 -7.662 -1.563 1.770 H36 L8L 76 L8L H37 H37 H 0 1 N N N -5.318 -0.049 29.641 -7.187 -3.274 1.899 H37 L8L 77 L8L H38 H38 H 0 1 N N N -4.537 -0.344 26.673 -5.162 -2.782 0.512 H38 L8L 78 L8L H39 H39 H 0 1 N N N -4.665 1.239 27.513 -5.186 -1.853 2.028 H39 L8L 79 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal L8L C41 C28 SING N N 1 L8L C3 N2 SING N N 2 L8L C3 C4 SING N N 3 L8L C28 C27 SING N N 4 L8L C17 C10 SING N N 5 L8L C27 N23 SING N N 6 L8L N2 C1 SING N N 7 L8L C4 C5 SING N N 8 L8L C10 C9 DOUB Y N 9 L8L C10 C11 SING Y N 10 L8L C9 N8 SING Y N 11 L8L C18 N23 SING N N 12 L8L C18 C19 DOUB N N 13 L8L N23 C22 SING N N 14 L8L C11 C13 DOUB Y N 15 L8L C11 C12 SING Y N 16 L8L C13 C14 SING Y N 17 L8L C1 C6 SING N N 18 L8L C5 C6 SING N N 19 L8L C5 C7 SING N N 20 L8L N8 C12 SING Y N 21 L8L N8 C7 SING N N 22 L8L C12 C16 DOUB Y N 23 L8L C14 C19 SING N N 24 L8L C14 C15 DOUB Y N 25 L8L C19 C20 SING N N 26 L8L C22 O29 DOUB N N 27 L8L C22 C21 SING N N 28 L8L C16 C15 SING Y N 29 L8L C20 C21 DOUB Y N 30 L8L C20 S24 SING Y N 31 L8L C21 C26 SING Y N 32 L8L C26 C25 DOUB Y N 33 L8L S24 C25 SING Y N 34 L8L C25 C30 SING N N 35 L8L C30 N31 SING N N 36 L8L C30 O32 DOUB N N 37 L8L N31 C33 SING N N 38 L8L C34 C33 SING N N 39 L8L C34 C35 SING N N 40 L8L C33 C38 SING N N 41 L8L C38 C37 SING N N 42 L8L O40 S36 DOUB N N 43 L8L C35 S36 SING N N 44 L8L S36 C37 SING N N 45 L8L S36 O39 DOUB N N 46 L8L C1 H1 SING N N 47 L8L C1 H2 SING N N 48 L8L C3 H3 SING N N 49 L8L C3 H4 SING N N 50 L8L C41 H5 SING N N 51 L8L C41 H6 SING N N 52 L8L C41 H7 SING N N 53 L8L C13 H8 SING N N 54 L8L C15 H9 SING N N 55 L8L C16 H10 SING N N 56 L8L C17 H11 SING N N 57 L8L C17 H12 SING N N 58 L8L C17 H13 SING N N 59 L8L C18 H14 SING N N 60 L8L C26 H15 SING N N 61 L8L C27 H16 SING N N 62 L8L C27 H17 SING N N 63 L8L C28 H18 SING N N 64 L8L C28 H19 SING N N 65 L8L N2 H20 SING N N 66 L8L C4 H22 SING N N 67 L8L C4 H23 SING N N 68 L8L C5 H24 SING N N 69 L8L C6 H25 SING N N 70 L8L C6 H26 SING N N 71 L8L C7 H27 SING N N 72 L8L C7 H28 SING N N 73 L8L C9 H29 SING N N 74 L8L N31 H30 SING N N 75 L8L C33 H31 SING N N 76 L8L C34 H32 SING N N 77 L8L C34 H33 SING N N 78 L8L C35 H34 SING N N 79 L8L C35 H35 SING N N 80 L8L C37 H36 SING N N 81 L8L C37 H37 SING N N 82 L8L C38 H38 SING N N 83 L8L C38 H39 SING N N 84 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor L8L InChI InChI 1.06 "InChI=1S/C31H38N4O4S2/c1-3-12-34-19-26(22-4-5-27-24(15-22)20(2)17-35(27)18-21-6-10-32-11-7-21)29-25(31(34)37)16-28(40-29)30(36)33-23-8-13-41(38,39)14-9-23/h4-5,15-17,19,21,23,32H,3,6-14,18H2,1-2H3,(H,33,36)" L8L InChIKey InChI 1.06 VJSZEIHADFWXCN-UHFFFAOYSA-N L8L SMILES_CANONICAL CACTVS 3.385 "CCCN1C=C(c2ccc3n(CC4CCNCC4)cc(C)c3c2)c5sc(cc5C1=O)C(=O)NC6CC[S](=O)(=O)CC6" L8L SMILES CACTVS 3.385 "CCCN1C=C(c2ccc3n(CC4CCNCC4)cc(C)c3c2)c5sc(cc5C1=O)C(=O)NC6CC[S](=O)(=O)CC6" L8L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCN1C=C(c2c(cc(s2)C(=O)NC3CCS(=O)(=O)CC3)C1=O)c4ccc5c(c4)c(cn5CC6CCNCC6)C" L8L SMILES "OpenEye OEToolkits" 2.0.7 "CCCN1C=C(c2c(cc(s2)C(=O)NC3CCS(=O)(=O)CC3)C1=O)c4ccc5c(c4)c(cn5CC6CCNCC6)C" # _pdbx_chem_comp_identifier.comp_id L8L _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[1,1-bis(oxidanylidene)thian-4-yl]-7-[3-methyl-1-(piperidin-4-ylmethyl)indol-5-yl]-4-oxidanylidene-5-propyl-thieno[3,2-c]pyridine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site L8L "Create component" 2022-06-21 PDBE L8L "Initial release" 2022-08-10 RCSB L8L "Modify descriptor" 2022-08-22 RCSB #