data_L9U # _chem_comp.id L9U _chem_comp.name "2-bromo-N-[(thiophen-2-yl)methyl]acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H8 Br N O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-03-01 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 234.114 _chem_comp.one_letter_code ? _chem_comp.three_letter_code L9U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7U4I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal L9U C7 C1 C 0 1 Y N N N N N -14.492 -34.232 10.628 5.080 0.157 0.595 C7 L9U 1 L9U C6 C2 C 0 1 Y N N N N N -14.202 -34.886 9.418 4.718 -1.123 0.494 C6 L9U 2 L9U S1 S1 S 0 1 Y N N N N N -15.474 -35.273 11.529 3.783 1.185 0.002 S1 L9U 3 L9U C4 C3 C 0 1 Y N N N N N -15.561 -36.553 10.425 2.796 -0.223 -0.369 C4 L9U 4 L9U C3 C4 C 0 1 N N N N N N -16.305 -37.871 10.612 1.412 -0.182 -0.964 C3 L9U 5 L9U C2 C5 C 0 1 N N N N N N -18.597 -37.275 11.491 -0.894 -0.078 -0.184 C2 L9U 6 L9U C1 C6 C 0 1 N N N N N N -20.121 -37.221 11.303 -1.915 -0.016 0.923 C1 L9U 7 L9U C5 C7 C 0 1 Y N N N N N -14.794 -36.184 9.307 3.456 -1.332 -0.034 C5 L9U 8 L9U N1 N1 N 0 1 N N N N N N -17.743 -37.776 10.429 0.420 -0.122 0.112 N1 L9U 9 L9U O1 O1 O 0 1 N N N N N N -18.102 -36.921 12.510 -1.255 -0.087 -1.342 O1 L9U 10 L9U H1 H1 H 0 1 N N N N N N -14.152 -33.251 10.926 6.023 0.508 0.987 H1 L9U 11 L9U H2 H2 H 0 1 N N N N N N -13.589 -34.449 8.644 5.362 -1.935 0.800 H2 L9U 12 L9U H3 H3 H 0 1 N N N N N N -15.912 -38.595 9.883 1.315 0.701 -1.597 H3 L9U 13 L9U H4 H4 H 0 1 N N N N N N -16.111 -38.235 11.632 1.246 -1.078 -1.562 H4 L9U 14 L9U H5 H5 H 0 1 N N N N N N -20.413 -38.049 10.641 -1.818 -0.899 1.556 H5 L9U 15 L9U H6 H6 H 0 1 N N N N N N -20.591 -37.356 12.288 -1.750 0.880 1.520 H6 L9U 16 L9U H8 H8 H 0 1 N N N N N N -14.663 -36.821 8.444 3.040 -2.320 -0.171 H8 L9U 17 L9U H9 H9 H 0 1 N N N N N N -18.150 -38.059 9.561 0.708 -0.115 1.038 H9 L9U 18 L9U BR1 BR1 BR 0 0 N Y N N N N -20.754 -35.668 10.581 -3.721 0.037 0.147 BR1 L9U 19 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal L9U C5 C6 SING Y N 1 L9U C5 C4 DOUB Y N 2 L9U C6 C7 DOUB Y N 3 L9U C4 C3 SING N N 4 L9U C4 S1 SING Y N 5 L9U N1 C3 SING N N 6 L9U N1 C2 SING N N 7 L9U C7 S1 SING Y N 8 L9U C1 C2 SING N N 9 L9U C2 O1 DOUB N N 10 L9U C7 H1 SING N N 11 L9U C6 H2 SING N N 12 L9U C3 H3 SING N N 13 L9U C3 H4 SING N N 14 L9U C1 H5 SING N N 15 L9U C1 H6 SING N N 16 L9U C5 H8 SING N N 17 L9U N1 H9 SING N N 18 L9U C1 BR1 SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor L9U SMILES ACDLabs 12.01 "O=C(NCc1cccs1)CBr" L9U InChI InChI 1.03 "InChI=1S/C7H8BrNOS/c8-4-7(10)9-5-6-2-1-3-11-6/h1-3H,4-5H2,(H,9,10)" L9U InChIKey InChI 1.03 XFGFQNGEXUDOOD-UHFFFAOYSA-N L9U SMILES_CANONICAL CACTVS 3.385 "BrCC(=O)NCc1sccc1" L9U SMILES CACTVS 3.385 "BrCC(=O)NCc1sccc1" L9U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)CNC(=O)CBr" L9U SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)CNC(=O)CBr" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier L9U "SYSTEMATIC NAME" ACDLabs 12.01 "2-bromo-N-[(thiophen-2-yl)methyl]acetamide" L9U "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-bromanyl-~{N}-(thiophen-2-ylmethyl)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site L9U "Create component" 2022-03-01 RCSB L9U "Initial release" 2022-12-07 RCSB L9U "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id L9U _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C1 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #