data_LAP # _chem_comp.id LAP _chem_comp.name "[2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H43 N O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "L-ALFA-LYSOPHOSPHATIDYLCHOLINE, LAUROYL" _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2002-09-02 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 440.532 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LAP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1MID _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LAP O1 O1 O 0 1 N N N 18.223 5.076 7.831 -2.084 -8.438 -12.236 O1 LAP 1 LAP O2 O2 O 0 1 N N N 20.130 5.434 9.288 -4.387 -8.503 -12.343 O2 LAP 2 LAP C1 C1 C 0 1 N N N 18.894 4.455 9.035 -3.334 -8.697 -11.751 C1 LAP 3 LAP C2 C2 C 0 1 N N N 18.895 3.143 9.751 -3.212 -9.236 -10.343 C2 LAP 4 LAP C3 C3 C 0 1 N N N 17.734 2.228 9.344 -4.384 -10.128 -9.935 C3 LAP 5 LAP C4 C4 C 0 1 N N N 16.960 1.780 10.538 -4.537 -11.349 -10.848 C4 LAP 6 LAP C5 C5 C 0 1 N N N 15.483 1.684 10.339 -5.734 -12.206 -10.432 C5 LAP 7 LAP C6 C6 C 0 1 N N N 14.711 1.317 11.561 -5.909 -13.407 -11.363 C6 LAP 8 LAP C7 C7 C 0 1 N N N 13.233 1.512 11.468 -7.127 -14.244 -10.965 C7 LAP 9 LAP C8 C8 C 0 1 N N N 12.736 2.004 10.144 -7.299 -15.512 -11.806 C8 LAP 10 LAP C9 C9 C 0 1 N N N 11.250 2.069 10.005 -8.450 -16.438 -11.399 C9 LAP 11 LAP C10 C10 C 0 1 N N N 10.762 2.104 8.587 -8.530 -17.715 -12.240 C10 LAP 12 LAP C11 C11 C 0 1 N N N 9.327 2.631 8.429 -9.734 -18.595 -11.891 C11 LAP 13 LAP C12 C12 C 0 1 N N N 8.350 1.590 7.976 -9.837 -19.852 -12.740 C12 LAP 14 LAP C13 C13 C 0 1 N N N ? ? ? -2.037 -7.890 -13.558 C13 LAP 15 LAP C14 C14 C 0 1 N N N ? ? ? -0.583 -7.661 -13.947 C14 LAP 16 LAP C15 C15 C 0 1 N N N ? ? ? 0.218 -8.957 -13.899 C15 LAP 17 LAP C16 C16 C 0 1 N N N ? ? ? -2.036 -12.258 -15.559 C16 LAP 18 LAP C17 C17 C 0 1 N N N ? ? ? -2.754 -13.075 -16.615 C17 LAP 19 LAP C18 C18 C 0 1 N N N ? ? ? -4.794 -11.705 -16.242 C18 LAP 20 LAP C19 C19 C 0 1 N N N ? ? ? -4.969 -13.915 -17.365 C19 LAP 21 LAP C20 C20 C 0 1 N N N ? ? ? -4.443 -13.792 -14.939 C20 LAP 22 LAP O3 O3 O 0 1 N N N ? ? ? -0.017 -6.737 -13.014 O3 LAP 23 LAP O4 O4 O 0 1 N N N ? ? ? -0.345 -9.907 -14.798 O4 LAP 24 LAP O5 O5 O 0 1 N N N ? ? ? 1.787 -11.351 -15.349 O5 LAP 25 LAP O6 O6 O 0 1 N N N ? ? ? -0.657 -12.180 -15.875 O6 LAP 26 LAP O7 O7 O 0 1 N N N ? ? ? 0.116 -12.000 -13.440 O7 LAP 27 LAP N8 N8 N 1 1 N N N ? ? ? -4.204 -13.121 -16.298 N8 LAP 28 LAP P9 P9 P 0 1 N N N ? ? ? 0.351 -11.361 -14.909 P9 LAP 29 LAP H21 1H2 H 0 1 N N N 19.838 2.626 9.519 -2.274 -9.796 -10.253 H21 LAP 30 LAP H22 2H2 H 0 1 N N N 18.784 3.356 10.824 -3.167 -8.373 -9.669 H22 LAP 31 LAP H31 1H3 H 0 1 N N N 17.063 2.781 8.670 -4.216 -10.473 -8.907 H31 LAP 32 LAP H32 2H3 H 0 1 N N N 18.147 1.341 8.841 -5.316 -9.550 -9.928 H32 LAP 33 LAP H41 1H4 H 0 1 N N N 17.324 0.780 10.814 -3.623 -11.953 -10.807 H41 LAP 34 LAP H42 2H4 H 0 1 N N N 17.118 2.545 11.313 -4.664 -11.027 -11.888 H42 LAP 35 LAP H51 1H5 H 0 1 N N N 15.126 2.667 9.999 -5.595 -12.556 -9.402 H51 LAP 36 LAP H52 2H5 H 0 1 N N N 15.317 0.877 9.610 -6.645 -11.595 -10.446 H52 LAP 37 LAP H61 1H6 H 0 1 N N N 14.893 0.251 11.760 -5.008 -14.031 -11.332 H61 LAP 38 LAP H62 2H6 H 0 1 N N N 15.059 1.991 12.358 -6.022 -13.048 -12.392 H62 LAP 39 LAP H71 1H7 H 0 1 N N N 12.757 0.540 11.662 -8.033 -13.631 -11.017 H71 LAP 40 LAP H72 2H7 H 0 1 N N N 12.978 2.291 12.202 -7.024 -14.547 -9.915 H72 LAP 41 LAP H81 1H8 H 0 1 N N N 13.128 3.021 9.999 -7.444 -15.222 -12.854 H81 LAP 42 LAP H82 2H8 H 0 1 N N N 13.084 1.277 9.395 -6.360 -16.079 -11.773 H82 LAP 43 LAP H91 1H9 H 0 1 N N N 10.827 1.175 10.486 -8.369 -16.696 -10.337 H91 LAP 44 LAP H92 2H9 H 0 1 N N N 10.929 3.011 10.474 -9.381 -15.870 -11.507 H92 LAP 45 LAP H101 1H10 H 0 0 N N N 11.430 2.764 8.015 -7.626 -18.315 -12.083 H101 LAP 46 LAP H102 2H10 H 0 0 N N N 10.763 1.066 8.223 -8.560 -17.457 -13.305 H102 LAP 47 LAP H111 1H11 H 0 0 N N N 8.993 3.011 9.406 -10.659 -18.015 -11.982 H111 LAP 48 LAP H112 2H11 H 0 0 N N N 9.352 3.411 7.654 -9.649 -18.894 -10.839 H112 LAP 49 LAP H121 1H12 H 0 0 N N N 8.110 1.749 6.914 -10.051 -19.614 -13.786 H121 LAP 50 LAP H122 2H12 H 0 0 N N N 8.792 0.591 8.107 -10.651 -20.486 -12.373 H122 LAP 51 LAP H123 3H12 H 0 0 N N N 7.430 1.666 8.574 -8.910 -20.433 -12.699 H123 LAP 52 LAP H131 1H13 H 0 0 N N N ? ? ? -2.521 -8.603 -14.234 H131 LAP 53 LAP H132 2H13 H 0 0 N N N ? ? ? -2.597 -6.950 -13.555 H132 LAP 54 LAP H14 H14 H 0 1 N N N ? ? ? -0.517 -7.191 -14.935 H14 LAP 55 LAP H151 1H15 H 0 0 N N N ? ? ? 0.214 -9.396 -12.896 H151 LAP 56 LAP H152 2H15 H 0 0 N N N ? ? ? 1.255 -8.792 -14.208 H152 LAP 57 LAP H161 1H16 H 0 0 N N N ? ? ? -2.437 -11.240 -15.541 H161 LAP 58 LAP H162 2H16 H 0 0 N N N ? ? ? -2.149 -12.697 -14.562 H162 LAP 59 LAP H171 1H17 H 0 0 N N N ? ? ? -2.410 -14.113 -16.637 H171 LAP 60 LAP H172 2H17 H 0 0 N N N ? ? ? -2.664 -12.623 -17.606 H172 LAP 61 LAP H181 1H18 H 0 0 N N N ? ? ? -5.879 -11.792 -16.321 H181 LAP 62 LAP H182 2H18 H 0 0 N N N ? ? ? -4.505 -11.260 -15.287 H182 LAP 63 LAP H183 3H18 H 0 0 N N N ? ? ? -4.383 -11.139 -17.079 H183 LAP 64 LAP H191 1H19 H 0 0 N N N ? ? ? -6.006 -14.006 -17.034 H191 LAP 65 LAP H192 2H19 H 0 0 N N N ? ? ? -4.904 -13.363 -18.304 H192 LAP 66 LAP H193 3H19 H 0 0 N N N ? ? ? -4.498 -14.896 -17.452 H193 LAP 67 LAP H201 1H20 H 0 0 N N N ? ? ? -5.522 -13.876 -14.793 H201 LAP 68 LAP H202 2H20 H 0 0 N N N ? ? ? -3.973 -14.777 -14.965 H202 LAP 69 LAP H203 3H20 H 0 0 N N N ? ? ? -3.991 -13.162 -14.170 H203 LAP 70 LAP HO3 HO3 H 0 1 N N N ? ? ? -0.597 -6.745 -12.238 HO3 LAP 71 LAP HO7 HO7 H 0 1 N N N ? ? ? 0.710 -11.734 -12.707 HO7 LAP 72 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LAP O1 C1 SING N N 1 LAP O1 C13 SING N N 2 LAP O2 C1 DOUB N N 3 LAP C1 C2 SING N N 4 LAP C2 C3 SING N N 5 LAP C2 H21 SING N N 6 LAP C2 H22 SING N N 7 LAP C3 C4 SING N N 8 LAP C3 H31 SING N N 9 LAP C3 H32 SING N N 10 LAP C4 C5 SING N N 11 LAP C4 H41 SING N N 12 LAP C4 H42 SING N N 13 LAP C5 C6 SING N N 14 LAP C5 H51 SING N N 15 LAP C5 H52 SING N N 16 LAP C6 C7 SING N N 17 LAP C6 H61 SING N N 18 LAP C6 H62 SING N N 19 LAP C7 C8 SING N N 20 LAP C7 H71 SING N N 21 LAP C7 H72 SING N N 22 LAP C8 C9 SING N N 23 LAP C8 H81 SING N N 24 LAP C8 H82 SING N N 25 LAP C9 C10 SING N N 26 LAP C9 H91 SING N N 27 LAP C9 H92 SING N N 28 LAP C10 C11 SING N N 29 LAP C10 H101 SING N N 30 LAP C10 H102 SING N N 31 LAP C11 C12 SING N N 32 LAP C11 H111 SING N N 33 LAP C11 H112 SING N N 34 LAP C12 H121 SING N N 35 LAP C12 H122 SING N N 36 LAP C12 H123 SING N N 37 LAP C13 C14 SING N N 38 LAP C13 H131 SING N N 39 LAP C13 H132 SING N N 40 LAP C14 C15 SING N N 41 LAP C14 O3 SING N N 42 LAP C14 H14 SING N N 43 LAP C15 O4 SING N N 44 LAP C15 H151 SING N N 45 LAP C15 H152 SING N N 46 LAP C16 C17 SING N N 47 LAP C16 O6 SING N N 48 LAP C16 H161 SING N N 49 LAP C16 H162 SING N N 50 LAP C17 N8 SING N N 51 LAP C17 H171 SING N N 52 LAP C17 H172 SING N N 53 LAP C18 N8 SING N N 54 LAP C18 H181 SING N N 55 LAP C18 H182 SING N N 56 LAP C18 H183 SING N N 57 LAP C19 N8 SING N N 58 LAP C19 H191 SING N N 59 LAP C19 H192 SING N N 60 LAP C19 H193 SING N N 61 LAP C20 N8 SING N N 62 LAP C20 H201 SING N N 63 LAP C20 H202 SING N N 64 LAP C20 H203 SING N N 65 LAP O3 HO3 SING N N 66 LAP O4 P9 SING N N 67 LAP O5 P9 DOUB N N 68 LAP O6 P9 SING N N 69 LAP O7 P9 SING N N 70 LAP O7 HO7 SING N N 71 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LAP SMILES ACDLabs 10.04 "O=C(OCC(O)COP(=O)(OCC[N+](C)(C)C)O)CCCCCCCCCCC" LAP SMILES_CANONICAL CACTVS 3.341 "CCCCCCCCCCCC(=O)OCC(O)CO[P](O)(=O)OCC[N+](C)(C)C" LAP SMILES CACTVS 3.341 "CCCCCCCCCCCC(=O)OCC(O)CO[P](O)(=O)OCC[N+](C)(C)C" LAP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCC(=O)OC[C@H](CO[P@@](=O)(O)OCC[N+](C)(C)C)O" LAP SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCC[N+](C)(C)C)O" LAP InChI InChI 1.03 "InChI=1S/C20H42NO7P/c1-5-6-7-8-9-10-11-12-13-14-20(23)26-17-19(22)18-28-29(24,25)27-16-15-21(2,3)4/h19,22H,5-18H2,1-4H3/p+1" LAP InChIKey InChI 1.03 BWKILASWCLJPBO-UHFFFAOYSA-O # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LAP "SYSTEMATIC NAME" ACDLabs 10.04 "4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphahenicosan-1-aminium 4-oxide" LAP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[[(2R)-3-dodecanoyloxy-2-hydroxy-propoxy]-hydroxy-phosphoryl]oxyethyl-trimethyl-azanium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LAP "Create component" 2002-09-02 RCSB LAP "Modify descriptor" 2011-06-04 RCSB LAP "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id LAP _pdbx_chem_comp_synonyms.name "L-ALFA-LYSOPHOSPHATIDYLCHOLINE, LAUROYL" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##