data_LAV # _chem_comp.id LAV _chem_comp.name "N-[(2S)-2-amino-4-methylpentyl]-L-valine" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H24 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-10-28 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 216.320 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LAV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4ER4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LAV C1 C C 0 1 N N N Y N N 35.532 -8.457 4.083 0.402 -0.025 -0.532 C LAV 1 LAV N N N 0 1 N N N Y Y N 35.325 -8.271 1.641 1.789 -1.651 0.665 N LAV 2 LAV O O O 0 1 N N N Y N Y 37.385 -11.094 4.232 -1.581 2.054 0.678 O LAV 3 LAV C C1 C 0 1 N N N Y N Y 36.678 -11.212 5.244 -2.339 1.378 0.024 C1 LAV 4 LAV N1 N1 N 0 1 N N N Y N N 34.997 -9.847 4.055 -0.714 -0.399 0.347 N1 LAV 5 LAV C2 C2 C 0 1 N N N N N N 34.345 -12.009 5.134 -3.096 -0.966 0.308 C2 LAV 6 LAV C3 C3 C 0 1 N N S Y N N 35.221 -10.743 5.251 -2.005 -0.062 -0.268 C3 LAV 7 LAV CA CA C 0 1 N N S Y N N 36.207 -8.063 2.810 1.726 -0.259 0.198 CA LAV 8 LAV CB CB C 0 1 N N N N N N 36.580 -6.622 3.056 2.890 0.011 -0.758 CB LAV 9 LAV CG CG C 0 1 N N N N N N 37.275 -5.963 1.865 4.212 -0.089 0.007 CG LAV 10 LAV CD1 CD1 C 0 1 N N N N N N 37.410 -4.447 2.018 5.379 0.055 -0.972 CD1 LAV 11 LAV CD2 CD2 C 0 1 N N N N N N 38.695 -6.486 1.638 4.282 1.026 1.052 CD2 LAV 12 LAV CG1 CG1 C 0 1 N N N N N N 34.872 -13.007 4.101 -4.413 -0.709 -0.428 CG1 LAV 13 LAV CG2 CG2 C 0 1 N N N N N N 34.246 -12.796 6.444 -2.691 -2.431 0.130 CG2 LAV 14 LAV H1 H H 0 1 N N N Y N N 34.692 -7.768 4.256 0.373 -0.634 -1.435 H LAV 15 LAV HAA HA H 0 1 N N N Y N N 36.266 -8.386 4.899 0.316 1.028 -0.800 HA LAV 16 LAV H HN H 0 1 N N N Y Y N 35.806 -7.998 0.808 1.069 -1.836 1.347 HN LAV 17 LAV H2 HNA H 0 1 N Y N Y Y N 35.075 -9.237 1.580 1.728 -2.295 -0.109 HNA LAV 18 LAV OXT OXT O 0 1 N Y N Y N Y 37.234 -11.796 6.425 -3.480 1.910 -0.442 O2 LAV 19 LAV HN1 HN1 H 0 1 N N N Y N N 34.006 -9.766 3.944 -0.673 -1.378 0.587 HN1 LAV 20 LAV H22 H2 H 0 1 N N N N N N 33.364 -11.608 4.838 -3.225 -0.751 1.368 H2 LAV 21 LAV H3 H3 H 0 1 N N N Y N N 34.973 -10.184 6.165 -1.942 -0.209 -1.346 H3 LAV 22 LAV HA HAA H 0 1 N N N Y N N 37.090 -8.670 2.562 1.794 0.414 1.053 HAA LAV 23 LAV HB HB H 0 1 N N N N N N 35.658 -6.061 3.269 2.878 -0.725 -1.562 HB LAV 24 LAV HBA HBA H 0 1 N N N N N N 37.265 -6.587 3.916 2.789 1.011 -1.179 HBA LAV 25 LAV HG HG H 0 1 N N N N N N 36.623 -6.216 1.016 4.271 -1.058 0.503 HG LAV 26 LAV HD1 HD1 H 0 1 N N N N N N 37.916 -4.032 1.134 5.366 1.054 -1.408 HD1 LAV 27 LAV HD1A HD1A H 0 0 N N N N N N 36.410 -3.998 2.113 6.319 -0.098 -0.442 HD1A LAV 28 LAV HD1B HD1B H 0 0 N N N N N N 38.001 -4.221 2.918 5.283 -0.688 -1.764 HD1B LAV 29 LAV HD2 HD2 H 0 1 N N N N N N 39.140 -5.976 0.771 3.450 0.923 1.749 HD2 LAV 30 LAV HD2A HD2A H 0 0 N N N N N N 39.305 -6.290 2.532 5.223 0.954 1.597 HD2A LAV 31 LAV HD2B HD2B H 0 0 N N N N N N 38.661 -7.569 1.448 4.222 1.994 0.555 HD2B LAV 32 LAV HG1 HG1 H 0 1 N N N N N N 34.208 -13.883 4.065 -4.284 -0.924 -1.489 HG1 LAV 33 LAV HG1A HG1A H 0 0 N N N N N N 34.902 -12.528 3.111 -5.190 -1.353 -0.018 HG1A LAV 34 LAV HG1B HG1B H 0 0 N N N N N N 35.886 -13.327 4.384 -4.701 0.335 -0.302 HG1B LAV 35 LAV HG2 HG2 H 0 1 N N N N N N 33.611 -13.682 6.293 -1.830 -2.649 0.762 HG2 LAV 36 LAV HG2A HG2A H 0 0 N N N N N N 35.251 -13.115 6.757 -3.523 -3.075 0.416 HG2A LAV 37 LAV HG2B HG2B H 0 0 N N N N N N 33.805 -12.157 7.223 -2.432 -2.613 -0.913 HG2B LAV 38 LAV HXT HXT H 0 1 N Y N Y N Y 38.140 -12.034 6.265 -3.652 2.837 -0.229 H24 LAV 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LAV C1 N1 SING N N 1 LAV C1 CA SING N N 2 LAV C1 H1 SING N N 3 LAV C1 HAA SING N N 4 LAV N CA SING N N 5 LAV N H SING N N 6 LAV N H2 SING N N 7 LAV O C DOUB N N 8 LAV C C3 SING N N 9 LAV C OXT SING N N 10 LAV N1 C3 SING N N 11 LAV N1 HN1 SING N N 12 LAV C2 C3 SING N N 13 LAV C2 CG1 SING N N 14 LAV C2 CG2 SING N N 15 LAV C2 H22 SING N N 16 LAV C3 H3 SING N N 17 LAV CA CB SING N N 18 LAV CA HA SING N N 19 LAV CB CG SING N N 20 LAV CB HB SING N N 21 LAV CB HBA SING N N 22 LAV CG CD1 SING N N 23 LAV CG CD2 SING N N 24 LAV CG HG SING N N 25 LAV CD1 HD1 SING N N 26 LAV CD1 HD1A SING N N 27 LAV CD1 HD1B SING N N 28 LAV CD2 HD2 SING N N 29 LAV CD2 HD2A SING N N 30 LAV CD2 HD2B SING N N 31 LAV CG1 HG1 SING N N 32 LAV CG1 HG1A SING N N 33 LAV CG1 HG1B SING N N 34 LAV CG2 HG2 SING N N 35 LAV CG2 HG2A SING N N 36 LAV CG2 HG2B SING N N 37 LAV OXT HXT SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LAV SMILES ACDLabs 12.01 "O=C(O)C(NCC(N)CC(C)C)C(C)C" LAV SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@H](N)CN[C@@H](C(C)C)C(O)=O" LAV SMILES CACTVS 3.370 "CC(C)C[CH](N)CN[CH](C(C)C)C(O)=O" LAV SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC(C)C[C@@H](CN[C@@H](C(C)C)C(=O)O)N" LAV SMILES "OpenEye OEToolkits" 1.7.0 "CC(C)CC(CNC(C(C)C)C(=O)O)N" LAV InChI InChI 1.03 "InChI=1S/C11H24N2O2/c1-7(2)5-9(12)6-13-10(8(3)4)11(14)15/h7-10,13H,5-6,12H2,1-4H3,(H,14,15)/t9-,10-/m0/s1" LAV InChIKey InChI 1.03 NPTLVLDJKIEXJU-UWVGGRQHSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LAV "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2S)-2-amino-4-methylpentyl]-L-valine" LAV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-2-[[(2S)-2-azanyl-4-methyl-pentyl]amino]-3-methyl-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LAV "Create component" 2010-10-28 RCSB LAV "Modify descriptor" 2011-06-04 RCSB LAV "Modify backbone" 2023-11-03 PDBE LAV "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id LAV _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain and backbone" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #