data_LBF # _chem_comp.id LBF _chem_comp.name "Leptomycin B" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H48 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-10-11 _chem_comp.pdbx_modified_date 2013-01-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 540.731 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LBF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4HAZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LBF O6 O6 O 0 1 N N N -48.248 68.056 33.366 -7.661 -4.100 1.555 O6 LBF 1 LBF C24 C24 C 0 1 N N N -47.330 68.021 32.539 -7.121 -3.443 0.509 C24 LBF 2 LBF O5 O5 O 0 1 N N N -47.444 67.322 31.510 -6.365 -4.021 -0.247 O5 LBF 3 LBF C23 C23 C 0 1 N N N -46.095 68.783 32.844 -7.446 -2.028 0.283 C23 LBF 4 LBF C22 C22 C 0 1 N N N -44.964 68.663 32.117 -6.849 -1.357 -0.699 C22 LBF 5 LBF C33 C33 C 0 1 N N N -44.903 67.786 30.899 -5.964 -2.083 -1.678 C33 LBF 6 LBF C21 C21 C 0 1 N N N -43.737 69.459 32.506 -7.058 0.130 -0.831 C21 LBF 7 LBF C20 C20 C 0 1 N N S -43.404 70.498 31.435 -5.919 0.870 -0.126 C20 LBF 8 LBF C32 C32 C 0 1 N N N -42.155 71.280 31.834 -5.978 0.585 1.376 C32 LBF 9 LBF C19 C19 C 0 1 N N R -44.574 71.451 31.172 -6.063 2.374 -0.366 C19 LBF 10 LBF O4 O4 O 0 1 N N N -44.776 72.240 32.351 -7.262 2.842 0.254 O4 LBF 11 LBF C18 C18 C 0 1 N N S -44.359 72.358 29.952 -4.860 3.103 0.235 C18 LBF 12 LBF C31 C31 C 0 1 N N N -45.397 73.476 29.895 -5.064 4.614 0.109 C31 LBF 13 LBF C17 C17 C 0 1 N N N -44.421 71.608 28.645 -3.609 2.702 -0.503 C17 LBF 14 LBF O3 O3 O 0 1 N N N -45.051 70.562 28.533 -3.669 2.392 -1.669 O3 LBF 15 LBF C16 C16 C 0 1 N N R -43.703 72.191 27.457 -2.283 2.687 0.213 C16 LBF 16 LBF C30 C30 C 0 1 N N N -44.581 72.082 26.216 -1.673 4.090 0.186 C30 LBF 17 LBF C15 C15 C 0 1 N N N -42.397 71.474 27.208 -1.352 1.721 -0.474 C15 LBF 18 LBF C14 C14 C 0 1 N N N -41.186 71.993 27.508 -0.936 0.632 0.164 C14 LBF 19 LBF C29 C29 C 0 1 N N N -41.032 73.361 28.118 -1.471 0.312 1.536 C29 LBF 20 LBF C13 C13 C 0 1 N N N -40.010 71.156 27.178 0.049 -0.259 -0.468 C13 LBF 21 LBF C12 C12 C 0 1 N N N -38.752 71.567 27.330 0.466 -1.348 0.170 C12 LBF 22 LBF C11 C11 C 0 1 N N N -37.629 70.633 26.936 1.474 -2.261 -0.478 C11 LBF 23 LBF C10 C10 C 0 1 N N R -36.573 70.549 28.025 2.673 -2.441 0.456 C10 LBF 24 LBF C28 C28 C 0 1 N N N -37.090 69.835 29.272 2.226 -3.167 1.726 C28 LBF 25 LBF C9 C9 C 0 1 N N N -35.375 69.797 27.496 3.734 -3.253 -0.241 C9 LBF 26 LBF C8 C8 C 0 1 N N N -34.142 70.330 27.340 4.970 -2.777 -0.350 C8 LBF 27 LBF C26 C26 C 0 1 N N N -33.008 69.474 26.798 6.058 -3.635 -0.943 C26 LBF 28 LBF C27 C27 C 0 1 N N N -33.451 68.119 26.294 6.197 -3.325 -2.435 C27 LBF 29 LBF C7 C7 C 0 1 N N N -33.855 71.741 27.696 5.276 -1.413 0.107 C7 LBF 30 LBF C6 C6 C 0 1 N N N -32.605 72.209 27.701 6.485 -0.900 -0.096 C6 LBF 31 LBF C5 C5 C 0 1 N N S -32.326 73.651 28.046 6.798 0.498 0.373 C5 LBF 32 LBF O2 O2 O 0 1 N N N -31.731 74.192 26.867 7.197 1.317 -0.766 O2 LBF 33 LBF C4 C4 C 0 1 N N S -31.395 73.840 29.236 7.952 0.455 1.377 C4 LBF 34 LBF C25 C25 C 0 1 N N N -30.013 73.239 29.015 9.083 -0.406 0.812 C25 LBF 35 LBF C3 C3 C 0 1 N N N -31.274 75.328 29.523 8.468 1.843 1.640 C3 LBF 36 LBF C2 C2 C 0 1 N N N -30.880 76.180 28.316 8.258 2.840 0.789 C2 LBF 37 LBF C1 C1 C 0 1 N N N -31.143 75.518 26.984 7.494 2.603 -0.449 C1 LBF 38 LBF O1 O1 O 0 1 N N N -30.848 76.099 25.953 7.142 3.525 -1.159 O1 LBF 39 LBF H1 H1 H 0 1 N N N -48.961 67.501 33.072 -7.417 -5.030 1.663 H1 LBF 40 LBF H2 H2 H 0 1 N N N -46.101 69.463 33.683 -8.169 -1.533 0.914 H2 LBF 41 LBF H3 H3 H 0 1 N N N -45.871 67.283 30.760 -4.960 -2.173 -1.264 H3 LBF 42 LBF H4 H4 H 0 1 N N N -44.680 68.401 30.015 -6.370 -3.077 -1.867 H4 LBF 43 LBF H5 H5 H 0 1 N N N -44.113 67.032 31.030 -5.922 -1.525 -2.614 H5 LBF 44 LBF H6 H6 H 0 1 N N N -42.884 68.774 32.622 -7.070 0.403 -1.886 H6 LBF 45 LBF H7 H7 H 0 1 N N N -43.927 69.972 33.460 -8.008 0.405 -0.373 H7 LBF 46 LBF H8 H8 H 0 1 N N N -43.186 69.963 30.499 -4.963 0.528 -0.523 H8 LBF 47 LBF H9 H9 H 0 1 N N N -41.327 70.580 32.018 -5.120 1.042 1.867 H9 LBF 48 LBF H10 H10 H 0 1 N N N -41.879 71.969 31.022 -6.897 1.001 1.789 H10 LBF 49 LBF H11 H11 H 0 1 N N N -42.359 71.855 32.749 -5.961 -0.493 1.542 H11 LBF 50 LBF H12 H12 H 0 1 N N N -45.471 70.842 30.986 -6.108 2.569 -1.437 H12 LBF 51 LBF H13 H13 H 0 1 N N N -44.908 71.667 33.097 -7.292 2.702 1.211 H13 LBF 52 LBF H14 H14 H 0 1 N N N -43.364 72.818 30.041 -4.762 2.837 1.288 H14 LBF 53 LBF H15 H15 H 0 1 N N N -45.377 74.044 30.837 -5.918 4.918 0.715 H15 LBF 54 LBF H16 H16 H 0 1 N N N -45.165 74.149 29.056 -4.170 5.132 0.456 H16 LBF 55 LBF H17 H17 H 0 1 N N N -46.397 73.041 29.751 -5.250 4.870 -0.935 H17 LBF 56 LBF H18 H18 H 0 1 N N N -43.495 73.254 27.651 -2.432 2.375 1.247 H18 LBF 57 LBF H19 H19 H 0 1 N N N -45.533 72.603 26.393 -2.346 4.788 0.682 H19 LBF 58 LBF H20 H20 H 0 1 N N N -44.065 72.542 25.360 -0.714 4.079 0.704 H20 LBF 59 LBF H21 H21 H 0 1 N N N -44.778 71.022 25.998 -1.524 4.401 -0.848 H21 LBF 60 LBF H22 H22 H 0 1 N N N -42.433 70.490 26.765 -1.024 1.913 -1.485 H22 LBF 61 LBF H23 H23 H 0 1 N N N -42.025 73.805 28.280 -2.323 -0.363 1.445 H23 LBF 62 LBF H24 H24 H 0 1 N N N -40.507 73.276 29.081 -0.691 -0.167 2.128 H24 LBF 63 LBF H25 H25 H 0 1 N N N -40.451 74.002 27.439 -1.787 1.232 2.027 H25 LBF 64 LBF H26 H26 H 0 1 N N N -40.181 70.161 26.794 0.433 -0.029 -1.451 H26 LBF 65 LBF H27 H27 H 0 1 N N N -38.538 72.548 27.727 0.082 -1.578 1.153 H27 LBF 66 LBF H28 H28 H 0 1 N N N -38.043 69.629 26.760 1.015 -3.231 -0.670 H28 LBF 67 LBF H29 H29 H 0 1 N N N -37.162 71.004 26.012 1.808 -1.824 -1.419 H29 LBF 68 LBF H30 H30 H 0 1 N N N -36.264 71.568 28.302 3.078 -1.464 0.719 H30 LBF 69 LBF H31 H31 H 0 1 N N N -36.294 69.798 30.030 1.821 -4.144 1.462 H31 LBF 70 LBF H32 H32 H 0 1 N N N -37.955 70.382 29.675 3.080 -3.295 2.391 H32 LBF 71 LBF H33 H33 H 0 1 N N N -37.393 68.811 29.009 1.458 -2.580 2.229 H33 LBF 72 LBF H34 H34 H 0 1 N N N -35.513 68.761 27.223 3.490 -4.222 -0.650 H34 LBF 73 LBF H35 H35 H 0 1 N N N -32.274 69.321 27.603 7.001 -3.426 -0.439 H35 LBF 74 LBF H36 H36 H 0 1 N N N -32.533 70.015 25.966 5.802 -4.687 -0.813 H36 LBF 75 LBF H37 H37 H 0 1 N N N -32.578 67.563 25.920 6.984 -3.945 -2.864 H37 LBF 76 LBF H38 H38 H 0 1 N N N -33.919 67.557 27.116 5.254 -3.534 -2.939 H38 LBF 77 LBF H39 H39 H 0 1 N N N -34.178 68.251 25.479 6.452 -2.273 -2.565 H39 LBF 78 LBF H40 H40 H 0 1 N N N -34.670 72.400 27.955 4.518 -0.828 0.607 H40 LBF 79 LBF H41 H41 H 0 1 N N N -31.786 71.549 27.456 7.243 -1.485 -0.595 H41 LBF 80 LBF H42 H42 H 0 1 N N N -33.278 74.159 28.257 5.917 0.930 0.846 H42 LBF 81 LBF H43 H43 H 0 1 N N N -31.849 73.353 30.112 7.601 0.018 2.311 H43 LBF 82 LBF H44 H44 H 0 1 N N N -29.392 73.409 29.907 9.433 0.023 -0.127 H44 LBF 83 LBF H45 H45 H 0 1 N N N -30.108 72.158 28.835 9.907 -0.438 1.526 H45 LBF 84 LBF H46 H46 H 0 1 N N N -29.541 73.716 28.144 8.716 -1.417 0.636 H46 LBF 85 LBF H47 H47 H 0 1 N N N -31.452 75.750 30.501 9.024 2.034 2.546 H47 LBF 86 LBF H49 H49 H 0 1 N N N -30.452 77.167 28.408 8.646 3.825 1.004 H49 LBF 87 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LBF O1 C1 DOUB N N 1 LBF C30 C16 SING N N 2 LBF C27 C26 SING N N 3 LBF C26 C8 SING N N 4 LBF O2 C1 SING N N 5 LBF O2 C5 SING N N 6 LBF C11 C12 SING N N 7 LBF C11 C10 SING N N 8 LBF C1 C2 SING N N 9 LBF C13 C12 DOUB N E 10 LBF C13 C14 SING N N 11 LBF C15 C16 SING N N 12 LBF C15 C14 DOUB N E 13 LBF C8 C9 DOUB N Z 14 LBF C8 C7 SING N N 15 LBF C16 C17 SING N N 16 LBF C9 C10 SING N N 17 LBF C14 C29 SING N N 18 LBF C7 C6 DOUB N E 19 LBF C6 C5 SING N N 20 LBF C10 C28 SING N N 21 LBF C5 C4 SING N N 22 LBF C2 C3 DOUB N N 23 LBF O3 C17 DOUB N N 24 LBF C17 C18 SING N N 25 LBF C25 C4 SING N N 26 LBF C4 C3 SING N N 27 LBF C31 C18 SING N N 28 LBF C18 C19 SING N N 29 LBF C33 C22 SING N N 30 LBF C19 C20 SING N N 31 LBF C19 O4 SING N N 32 LBF C20 C32 SING N N 33 LBF C20 C21 SING N N 34 LBF O5 C24 DOUB N N 35 LBF C22 C21 SING N N 36 LBF C22 C23 DOUB N E 37 LBF C24 C23 SING N N 38 LBF C24 O6 SING N N 39 LBF O6 H1 SING N N 40 LBF C23 H2 SING N N 41 LBF C33 H3 SING N N 42 LBF C33 H4 SING N N 43 LBF C33 H5 SING N N 44 LBF C21 H6 SING N N 45 LBF C21 H7 SING N N 46 LBF C20 H8 SING N N 47 LBF C32 H9 SING N N 48 LBF C32 H10 SING N N 49 LBF C32 H11 SING N N 50 LBF C19 H12 SING N N 51 LBF O4 H13 SING N N 52 LBF C18 H14 SING N N 53 LBF C31 H15 SING N N 54 LBF C31 H16 SING N N 55 LBF C31 H17 SING N N 56 LBF C16 H18 SING N N 57 LBF C30 H19 SING N N 58 LBF C30 H20 SING N N 59 LBF C30 H21 SING N N 60 LBF C15 H22 SING N N 61 LBF C29 H23 SING N N 62 LBF C29 H24 SING N N 63 LBF C29 H25 SING N N 64 LBF C13 H26 SING N N 65 LBF C12 H27 SING N N 66 LBF C11 H28 SING N N 67 LBF C11 H29 SING N N 68 LBF C10 H30 SING N N 69 LBF C28 H31 SING N N 70 LBF C28 H32 SING N N 71 LBF C28 H33 SING N N 72 LBF C9 H34 SING N N 73 LBF C26 H35 SING N N 74 LBF C26 H36 SING N N 75 LBF C27 H37 SING N N 76 LBF C27 H38 SING N N 77 LBF C27 H39 SING N N 78 LBF C7 H40 SING N N 79 LBF C6 H41 SING N N 80 LBF C5 H42 SING N N 81 LBF C4 H43 SING N N 82 LBF C25 H44 SING N N 83 LBF C25 H45 SING N N 84 LBF C25 H46 SING N N 85 LBF C3 H47 SING N N 86 LBF C2 H49 SING N N 87 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LBF SMILES ACDLabs 12.01 "O=C(O)\C=C(/C)CC(C)C(O)C(C(=O)C(/C=C(/C=C/CC(/C=C(\C=C\C1OC(=O)C=CC1C)CC)C)C)C)C" LBF InChI InChI 1.03 ;InChI=1S/C33H48O6/c1-9-28(14-15-29-24(5)13-16-31(36)39-29)19-22(3)12-10-11-21(2)17-25(6)32(37)27(8)33(38)26(7)18-23(4)20-30(34)35/h10-11,13-17,19-20,22,24-27,29,33,38H,9,12,18H2,1-8H3,(H,34,35)/b11-10+,15-14+,21-17+,23-20+,28-19-/t22-,24+,25-,26+,27-,29+,33-/m1/s1 ; LBF InChIKey InChI 1.03 YACHGFWEQXFSBS-XYERBDPFSA-N LBF SMILES_CANONICAL CACTVS 3.370 "CCC(/C=C/[C@@H]1OC(=O)C=C[C@@H]1C)=C/[C@H](C)C/C=C/C(C)=C/[C@@H](C)C(=O)[C@@H](C)[C@H](O)[C@@H](C)CC(/C)=C/C(O)=O" LBF SMILES CACTVS 3.370 "CCC(C=C[CH]1OC(=O)C=C[CH]1C)=C[CH](C)CC=CC(C)=C[CH](C)C(=O)[CH](C)[CH](O)[CH](C)CC(C)=CC(O)=O" LBF SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC/C(=C/[C@H](C)C/C=C/C(=C/[C@@H](C)C(=O)[C@@H](C)[C@@H]([C@@H](C)C/C(=C/C(=O)O)/C)O)/C)/C=C/[C@H]1[C@H](C=CC(=O)O1)C" LBF SMILES "OpenEye OEToolkits" 1.7.6 "CCC(=CC(C)CC=CC(=CC(C)C(=O)C(C)C(C(C)CC(=CC(=O)O)C)O)C)C=CC1C(C=CC(=O)O1)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LBF "SYSTEMATIC NAME" ACDLabs 12.01 "(2E,5S,6R,7S,9R,10E,12E,15R,16Z,18E)-17-ethyl-6-hydroxy-3,5,7,9,11,15-hexamethyl-19-[(2S,3S)-3-methyl-6-oxo-3,6-dihydro-2H-pyran-2-yl]-8-oxononadeca-2,10,12,16,18-pentaenoic acid" LBF "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2E,5S,6R,7S,9R,10E,12E,15R,16Z,18E)-17-ethyl-3,5,7,9,11,15-hexamethyl-19-[(2S,3S)-3-methyl-6-oxidanylidene-2,3-dihydropyran-2-yl]-6-oxidanyl-8-oxidanylidene-nonadeca-2,10,12,16,18-pentaenoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LBF "Create component" 2012-10-11 RCSB LBF "Initial release" 2013-01-04 RCSB #