data_LCS
#
_chem_comp.id LCS
_chem_comp.name "[5-hydroxy-6-methyl-4-({[(4E)-3-oxo-1,2-oxazolidin-4-ylidene]amino}methyl)pyridin-3-yl]methyl dihydrogen phosphate"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H14 N3 O7 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-11-17
_chem_comp.pdbx_modified_date 2011-07-21
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 331.219
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LCS
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1D7U
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LCS N1 N1 N 0 1 Y N N 17.548 53.571 13.857 0.646 -3.239 -0.785 N1 LCS 1
LCS C2 C2 C 0 1 Y N N 16.476 53.854 14.628 -0.625 -3.318 -0.445 C2 LCS 2
LCS C2A C2A C 0 1 N N N 15.458 54.823 14.090 -1.412 -4.557 -0.784 C2A LCS 3
LCS C3 C3 C 0 1 Y N N 16.370 53.230 15.900 -1.245 -2.272 0.223 C3 LCS 4
LCS O3 O3 O 0 1 N N N 15.254 53.532 16.639 -2.556 -2.358 0.573 O3 LCS 5
LCS C4 C4 C 0 1 Y N N 17.382 52.396 16.321 -0.507 -1.134 0.530 C4 LCS 6
LCS C4A C4A C 0 1 N N N 17.314 51.669 17.547 -1.141 0.026 1.255 C4A LCS 7
LCS C5 C5 C 0 1 Y N N 18.441 52.118 15.409 0.826 -1.092 0.153 C5 LCS 8
LCS C6 C6 C 0 1 Y N N 18.532 52.730 14.203 1.374 -2.174 -0.510 C6 LCS 9
LCS C5A C5A C 0 1 N N N 19.623 51.216 15.864 1.668 0.119 0.462 C5A LCS 10
LCS O4P O4P O 0 1 N N N 19.367 49.830 15.843 2.959 -0.034 -0.132 O4P LCS 11
LCS P P P 0 1 N N N 20.320 48.839 16.721 4.120 1.074 -0.005 P LCS 12
LCS O1P O1P O 0 1 N N N 20.248 49.289 18.125 3.610 2.379 -0.481 O1P LCS 13
LCS O2P O2P O 0 1 N N N 19.767 47.392 16.569 4.572 1.202 1.535 O2P LCS 14
LCS O3P O3P O 0 1 N N N 21.654 48.881 16.081 5.383 0.632 -0.900 O3P LCS 15
LCS N N N 0 1 N N N 16.361 51.939 18.337 -1.583 1.027 0.281 N LCS 16
LCS CA CA C 0 1 N N N 16.429 51.685 19.632 -2.828 1.306 0.170 CA LCS 17
LCS C C C 0 1 N N N 15.488 52.010 20.583 -3.447 2.353 -0.685 C LCS 18
LCS O O O 0 1 N N N 14.325 52.585 20.621 -2.849 3.115 -1.418 O LCS 19
LCS ND ND N 0 1 N N N 15.942 51.592 21.726 -4.778 2.316 -0.511 ND LCS 20
LCS OG OG O 0 1 N N N 17.191 50.934 21.514 -5.158 1.316 0.408 OG LCS 21
LCS CB CB C 0 1 N N N 17.516 51.017 20.189 -3.988 0.635 0.874 CB LCS 22
LCS H2A1 H2A1 H 0 0 N N N 15.770 55.167 13.093 -1.335 -5.272 0.035 H2A1 LCS 23
LCS H2A2 H2A2 H 0 0 N N N 14.480 54.324 14.017 -2.458 -4.293 -0.937 H2A2 LCS 24
LCS H2A3 H2A3 H 0 0 N N N 15.380 55.686 14.767 -1.013 -5.003 -1.695 H2A3 LCS 25
LCS HO3 HO3 H 0 1 N N N 15.285 53.064 17.465 -2.705 -2.741 1.449 HO3 LCS 26
LCS H4A1 H4A1 H 0 0 N N N 17.217 50.606 17.282 -1.998 -0.329 1.827 H4A1 LCS 27
LCS H4A2 H4A2 H 0 0 N N N 18.247 51.874 18.092 -0.412 0.473 1.931 H4A2 LCS 28
LCS H6 H6 H 0 1 N N N 19.368 52.546 13.544 2.412 -2.148 -0.805 H6 LCS 29
LCS H5A1 H5A1 H 0 0 N N N 20.467 51.408 15.185 1.186 1.009 0.058 H5A1 LCS 30
LCS H5A2 H5A2 H 0 0 N N N 19.872 51.492 16.899 1.775 0.221 1.542 H5A2 LCS 31
LCS HOP2 HOP2 H 0 0 N N N 19.485 47.070 17.417 4.918 0.382 1.913 HOP2 LCS 32
LCS HOP3 HOP3 H 0 0 N N N 22.294 49.208 16.703 6.122 1.255 -0.871 HOP3 LCS 33
LCS HND HND H 0 1 N N N 15.490 51.712 22.610 -5.402 2.905 -0.962 HND LCS 34
LCS HB1 HB1 H 0 1 N N N 17.650 50.021 19.743 -4.032 -0.422 0.608 HB1 LCS 35
LCS HB2 HB2 H 0 1 N N N 18.453 51.573 20.037 -3.892 0.749 1.954 HB2 LCS 36
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LCS N1 C2 DOUB Y N 1
LCS N1 C6 SING Y N 2
LCS C2 C2A SING N N 3
LCS C2 C3 SING Y N 4
LCS C3 O3 SING N N 5
LCS C3 C4 DOUB Y N 6
LCS C4 C4A SING N N 7
LCS C4 C5 SING Y N 8
LCS C4A N SING N N 9
LCS C5 C6 DOUB Y N 10
LCS C5 C5A SING N N 11
LCS C5A O4P SING N N 12
LCS O4P P SING N N 13
LCS P O1P DOUB N N 14
LCS P O2P SING N N 15
LCS P O3P SING N N 16
LCS N CA DOUB N N 17
LCS CA C SING N N 18
LCS CA CB SING N N 19
LCS C O DOUB N N 20
LCS C ND SING N N 21
LCS ND OG SING N N 22
LCS OG CB SING N N 23
LCS C2A H2A1 SING N N 24
LCS C2A H2A2 SING N N 25
LCS C2A H2A3 SING N N 26
LCS O3 HO3 SING N N 27
LCS C4A H4A1 SING N N 28
LCS C4A H4A2 SING N N 29
LCS C6 H6 SING N N 30
LCS C5A H5A1 SING N N 31
LCS C5A H5A2 SING N N 32
LCS O2P HOP2 SING N N 33
LCS O3P HOP3 SING N N 34
LCS ND HND SING N N 35
LCS CB HB1 SING N N 36
LCS CB HB2 SING N N 37
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LCS SMILES ACDLabs 12.01 "O=C2/C(=N/Cc1c(cnc(c1O)C)COP(=O)(O)O)CON2"
LCS InChI InChI 1.03 "InChI=1S/C11H14N3O7P/c1-6-10(15)8(3-13-9-5-20-14-11(9)16)7(2-12-6)4-21-22(17,18)19/h2,15H,3-5H2,1H3,(H,14,16)(H2,17,18,19)/b13-9+"
LCS InChIKey InChI 1.03 KFCQHWOGBVCKHR-UKTHLTGXSA-N
LCS SMILES_CANONICAL CACTVS 3.370 "Cc1ncc(CO[P](O)(O)=O)c(CN=C2CONC2=O)c1O"
LCS SMILES CACTVS 3.370 "Cc1ncc(CO[P](O)(O)=O)c(CN=C2CONC2=O)c1O"
LCS SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "Cc1c(c(c(cn1)COP(=O)(O)O)C/N=C/2\CONC2=O)O"
LCS SMILES "OpenEye OEToolkits" 1.7.2 "Cc1c(c(c(cn1)COP(=O)(O)O)CN=C2CONC2=O)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LCS "SYSTEMATIC NAME" ACDLabs 12.01 "[5-hydroxy-6-methyl-4-({[(4E)-3-oxo-1,2-oxazolidin-4-ylidene]amino}methyl)pyridin-3-yl]methyl dihydrogen phosphate"
LCS "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "[6-methyl-5-oxidanyl-4-[[(E)-(3-oxidanylidene-1,2-oxazolidin-4-ylidene)amino]methyl]pyridin-3-yl]methyl dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LCS "Create component" 1999-11-17 RCSB
LCS "Other modification" 2011-07-21 RCSB
#