data_LD8 # _chem_comp.id LD8 _chem_comp.name "2,4-dimethoxypyrimidine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H8 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-08-05 _chem_comp.pdbx_modified_date 2020-01-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 140.140 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LD8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6SGN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LD8 O01 O1 O 0 1 N N N -35.236 -1.829 5.048 -2.577 -0.091 0.000 O01 LD8 1 LD8 O02 O2 O 0 1 N N N -31.693 -2.106 2.025 1.926 -1.202 0.000 O02 LD8 2 LD8 N03 N1 N 0 1 Y N N -33.522 -1.973 3.469 -0.308 -0.618 0.000 N03 LD8 3 LD8 N04 N2 N 0 1 Y N N -31.160 -1.702 4.375 1.316 1.025 -0.000 N04 LD8 4 LD8 C05 C1 C 0 1 Y N N -33.927 -1.791 4.774 -1.276 0.290 0.000 C05 LD8 5 LD8 C06 C2 C 0 1 Y N N -33.030 -1.569 5.908 -0.936 1.642 0.000 C06 LD8 6 LD8 C07 C3 C 0 1 Y N N -32.124 -1.927 3.321 0.962 -0.250 0.000 C07 LD8 7 LD8 C08 C4 C 0 1 Y N N -31.656 -1.536 5.647 0.403 1.985 -0.000 C08 LD8 8 LD8 C09 C5 C 0 1 N N N -35.544 -1.922 6.464 -2.841 -1.496 -0.000 C09 LD8 9 LD8 C10 C6 C 0 1 N N N -30.352 -2.569 1.818 3.282 -0.752 -0.000 C10 LD8 10 LD8 H1 H1 H 0 1 N N N -33.414 -1.436 6.909 -1.702 2.404 -0.000 H1 LD8 11 LD8 H2 H2 H 0 1 N N N -30.968 -1.376 6.464 0.701 3.023 -0.000 H2 LD8 12 LD8 H3 H3 H 0 1 N N N -36.635 -1.948 6.602 -2.403 -1.948 0.890 H3 LD8 13 LD8 H4 H4 H 0 1 N N N -35.101 -2.841 6.876 -3.918 -1.663 -0.001 H4 LD8 14 LD8 H5 H5 H 0 1 N N N -35.129 -1.048 6.987 -2.403 -1.947 -0.890 H5 LD8 15 LD8 H6 H6 H 0 1 N N N -30.158 -2.662 0.739 3.466 -0.150 0.890 H6 LD8 16 LD8 H7 H7 H 0 1 N N N -29.644 -1.851 2.257 3.951 -1.614 -0.000 H7 LD8 17 LD8 H8 H8 H 0 1 N N N -30.225 -3.550 2.299 3.466 -0.150 -0.890 H8 LD8 18 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LD8 C10 O02 SING N N 1 LD8 O02 C07 SING N N 2 LD8 C07 N03 DOUB Y N 3 LD8 C07 N04 SING Y N 4 LD8 N03 C05 SING Y N 5 LD8 N04 C08 DOUB Y N 6 LD8 C05 O01 SING N N 7 LD8 C05 C06 DOUB Y N 8 LD8 O01 C09 SING N N 9 LD8 C08 C06 SING Y N 10 LD8 C06 H1 SING N N 11 LD8 C08 H2 SING N N 12 LD8 C09 H3 SING N N 13 LD8 C09 H4 SING N N 14 LD8 C09 H5 SING N N 15 LD8 C10 H6 SING N N 16 LD8 C10 H7 SING N N 17 LD8 C10 H8 SING N N 18 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LD8 InChI InChI 1.03 "InChI=1S/C6H8N2O2/c1-9-5-3-4-7-6(8-5)10-2/h3-4H,1-2H3" LD8 InChIKey InChI 1.03 KEVRHVMWBKFGLO-UHFFFAOYSA-N LD8 SMILES_CANONICAL CACTVS 3.385 "COc1ccnc(OC)n1" LD8 SMILES CACTVS 3.385 "COc1ccnc(OC)n1" LD8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccnc(n1)OC" LD8 SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccnc(n1)OC" # _pdbx_chem_comp_identifier.comp_id LD8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2,4-dimethoxypyrimidine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LD8 "Create component" 2019-08-05 PDBE LD8 "Initial release" 2020-02-05 RCSB ##