data_LEI # _chem_comp.id LEI _chem_comp.name 3-sulfanyl-D-valine _chem_comp.type "D-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C5 H11 N O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms D-PENICILLAMINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-05-16 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 149.211 _chem_comp.one_letter_code V _chem_comp.three_letter_code LEI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3H5G _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LEI N N N 0 1 N N N Y Y N 8.250 2.214 6.256 0.162 1.873 -0.452 N LEI 1 LEI CA CA C 0 1 N N S Y N N 8.363 0.864 5.684 0.328 0.424 -0.622 CA LEI 2 LEI CB CB C 0 1 N N N N N N 8.922 -0.190 6.650 -0.707 -0.312 0.232 CB LEI 3 LEI C8 C8 C 0 1 N N N N N N 8.200 -0.136 7.987 -0.456 -1.819 0.152 C8 LEI 4 LEI C9 C9 C 0 1 N N N N N N 10.413 -0.008 6.883 -0.588 0.149 1.686 C9 LEI 5 LEI SG SG S 0 1 N N N N N N 8.633 -1.816 5.953 -2.372 0.057 -0.386 SG LEI 6 LEI C C C 0 1 N N N Y N Y 8.892 0.909 4.252 1.714 0.022 -0.189 C LEI 7 LEI O O O 0 1 N N N Y N Y 9.931 0.330 3.898 2.352 0.744 0.540 O LEI 8 LEI H HN H 0 1 N N N Y Y N 8.224 2.153 7.254 -0.736 2.178 -0.796 HN LEI 9 LEI H2 HN2 H 0 1 N Y N Y Y N 9.039 2.762 5.976 0.290 2.141 0.513 HNA LEI 10 LEI HA HA H 0 1 N N N Y N N 7.353 0.448 5.555 0.185 0.162 -1.671 HA LEI 11 LEI H8 H8 H 0 1 N N N N N N 8.938 -0.123 8.803 0.545 -2.041 0.523 H8 LEI 12 LEI H8A H8A H 0 1 N N N N N N 7.585 0.775 8.035 -1.193 -2.343 0.760 H8A LEI 13 LEI H8B H8B H 0 1 N N N N N N 7.555 -1.021 8.091 -0.540 -2.147 -0.884 H8B LEI 14 LEI H9 H9 H 0 1 N N N N N N 10.933 0.036 5.915 -0.767 1.223 1.743 H9 LEI 15 LEI H9A H9A H 0 1 N N N N N N 10.586 0.928 7.435 -1.326 -0.375 2.294 H9A LEI 16 LEI H9B H9B H 0 1 N N N N N N 10.799 -0.856 7.468 0.412 -0.073 2.057 H9B LEI 17 LEI HSG HSG H 0 1 N N N N N N 8.563 -1.727 4.658 -3.165 -0.644 0.445 HSG LEI 18 LEI OXT OXT O 0 1 N Y N Y N Y 8.157 1.652 3.276 2.240 -1.139 -0.611 O2 LEI 19 LEI HXT HXT H 0 1 N Y N Y N Y 8.597 1.594 2.436 3.132 -1.354 -0.306 H11 LEI 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LEI N H SING N N 1 LEI N H2 SING N N 2 LEI CA N SING N N 3 LEI CA CB SING N N 4 LEI CA HA SING N N 5 LEI CB C9 SING N N 6 LEI CB C8 SING N N 7 LEI C8 H8 SING N N 8 LEI C8 H8A SING N N 9 LEI C8 H8B SING N N 10 LEI C9 H9 SING N N 11 LEI C9 H9A SING N N 12 LEI C9 H9B SING N N 13 LEI SG CB SING N N 14 LEI SG HSG SING N N 15 LEI C CA SING N N 16 LEI C OXT SING N N 17 LEI O C DOUB N N 18 LEI OXT HXT SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LEI SMILES ACDLabs 10.04 "O=C(O)C(N)C(S)(C)C" LEI SMILES_CANONICAL CACTVS 3.341 "CC(C)(S)[C@@H](N)C(O)=O" LEI SMILES CACTVS 3.341 "CC(C)(S)[CH](N)C(O)=O" LEI SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)([C@H](C(=O)O)N)S" LEI SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)(C(C(=O)O)N)S" LEI InChI InChI 1.03 "InChI=1S/C5H11NO2S/c1-5(2,9)3(6)4(7)8/h3,9H,6H2,1-2H3,(H,7,8)/t3-/m0/s1" LEI InChIKey InChI 1.03 VVNCNSJFMMFHPL-VKHMYHEASA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LEI "SYSTEMATIC NAME" ACDLabs 10.04 3-sulfanyl-D-valine LEI "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-amino-3-methyl-3-sulfanyl-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LEI "Create component" 2009-05-16 RCSB LEI "Modify descriptor" 2011-06-04 RCSB LEI "Modify synonyms" 2020-06-05 PDBE LEI "Modify backbone" 2023-11-03 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id LEI _pdbx_chem_comp_synonyms.name D-PENICILLAMINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? #