data_LF6 # _chem_comp.id LF6 _chem_comp.name "{(1R,2R)-2-[(Z)-(3-methyl-1,2,4-thiadiazol-5(2H)-ylidene)amino]cyclopentyl}methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H15 N3 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-03-04 _chem_comp.pdbx_modified_date 2022-03-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 213.300 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LF6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SKW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LF6 N1 N1 N 0 1 N N N 60.433 22.726 87.530 3.171 0.258 0.976 N1 LF6 1 LF6 N3 N2 N 0 1 N N N 59.043 22.447 85.737 2.282 -0.210 -1.048 N3 LF6 2 LF6 C4 C1 C 0 1 N N R 57.266 19.383 86.967 -1.243 -0.701 -0.022 C4 LF6 3 LF6 C5 C2 C 0 1 N N N 56.916 18.150 86.140 -1.972 -2.056 -0.195 C5 LF6 4 LF6 C6 C3 C 0 1 N N N 55.951 17.403 87.036 -3.416 -1.771 0.266 C6 LF6 5 LF6 C7 C4 C 0 1 N N N 55.023 18.510 87.470 -3.638 -0.257 0.103 C7 LF6 6 LF6 C8 C5 C 0 1 N N R 55.963 19.687 87.765 -2.322 0.325 -0.451 C8 LF6 7 LF6 C1 C6 C 0 1 N N N 59.953 24.718 86.191 4.664 0.246 -0.993 C1 LF6 8 LF6 C2 C7 C 0 1 N N N 59.801 23.270 86.498 3.313 0.088 -0.343 C2 LF6 9 LF6 S1 S1 S 0 1 N N N 59.710 21.268 87.885 1.522 -0.004 1.301 S1 LF6 10 LF6 C3 C8 C 0 1 N N N 58.735 21.380 86.439 1.109 -0.325 -0.395 C3 LF6 11 LF6 N2 N3 N 0 1 N N N 57.758 20.506 86.117 -0.072 -0.620 -0.899 N2 LF6 12 LF6 C9 C9 C 0 1 N N N 56.160 19.800 89.263 -2.037 1.693 0.171 C9 LF6 13 LF6 O1 O1 O 0 1 N N N 57.073 20.831 89.592 -2.975 2.648 -0.329 O1 LF6 14 LF6 H1 H1 H 0 1 N N N 61.212 23.124 88.013 3.866 0.479 1.616 H1 LF6 15 LF6 H3 H3 H 0 1 N N N 58.052 19.109 87.687 -0.956 -0.547 1.019 H3 LF6 16 LF6 H4 H4 H 0 1 N N N 56.437 18.433 85.191 -1.959 -2.365 -1.240 H4 LF6 17 LF6 H5 H5 H 0 1 N N N 57.811 17.546 85.932 -1.514 -2.819 0.435 H5 LF6 18 LF6 H6 H6 H 0 1 N N N 55.412 16.621 86.482 -4.122 -2.321 -0.356 H6 LF6 19 LF6 H7 H7 H 0 1 N N N 56.468 16.952 87.896 -3.537 -2.056 1.311 H7 LF6 20 LF6 H8 H8 H 0 1 N N N 54.316 18.766 86.667 -4.452 -0.073 -0.598 H8 LF6 21 LF6 H9 H9 H 0 1 N N N 54.464 18.221 88.372 -3.868 0.192 1.069 H9 LF6 22 LF6 H10 H10 H 0 1 N N N 55.515 20.615 87.381 -2.365 0.400 -1.537 H10 LF6 23 LF6 H11 H11 H 0 1 N N N 59.371 24.966 85.291 4.574 0.070 -2.065 H11 LF6 24 LF6 H12 H12 H 0 1 N N N 59.586 25.313 87.040 5.034 1.257 -0.820 H12 LF6 25 LF6 H13 H13 H 0 1 N N N 61.015 24.946 86.015 5.360 -0.474 -0.563 H13 LF6 26 LF6 H15 H15 H 0 1 N N N 55.191 20.017 89.735 -2.131 1.626 1.255 H15 LF6 27 LF6 H16 H16 H 0 1 N N N 56.548 18.844 89.645 -1.026 2.007 -0.087 H16 LF6 28 LF6 H17 H17 H 0 1 N N N 57.174 20.876 90.536 -2.854 3.540 0.023 H17 LF6 29 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LF6 N3 C3 SING N N 1 LF6 N3 C2 DOUB N N 2 LF6 N2 C3 DOUB N N 3 LF6 N2 C4 SING N N 4 LF6 C5 C4 SING N N 5 LF6 C5 C6 SING N N 6 LF6 C1 C2 SING N N 7 LF6 C3 S1 SING N N 8 LF6 C2 N1 SING N N 9 LF6 C4 C8 SING N N 10 LF6 C6 C7 SING N N 11 LF6 C7 C8 SING N N 12 LF6 N1 S1 SING N N 13 LF6 C8 C9 SING N N 14 LF6 C9 O1 SING N N 15 LF6 N1 H1 SING N N 16 LF6 C4 H3 SING N N 17 LF6 C5 H4 SING N N 18 LF6 C5 H5 SING N N 19 LF6 C6 H6 SING N N 20 LF6 C6 H7 SING N N 21 LF6 C7 H8 SING N N 22 LF6 C7 H9 SING N N 23 LF6 C8 H10 SING N N 24 LF6 C1 H11 SING N N 25 LF6 C1 H12 SING N N 26 LF6 C1 H13 SING N N 27 LF6 C9 H15 SING N N 28 LF6 C9 H16 SING N N 29 LF6 O1 H17 SING N N 30 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LF6 SMILES ACDLabs 12.01 "CC1=N\C(=N\C2CCCC2CO)SN1" LF6 InChI InChI 1.03 "InChI=1S/C9H15N3OS/c1-6-10-9(14-12-6)11-8-4-2-3-7(8)5-13/h7-8,13H,2-5H2,1H3,(H,10,11,12)/t7-,8+/m0/s1" LF6 InChIKey InChI 1.03 QUKZXHGECCPEIZ-JGVFFNPUSA-N LF6 SMILES_CANONICAL CACTVS 3.385 "CC1=NC(SN1)=N[C@@H]2CCC[C@H]2CO" LF6 SMILES CACTVS 3.385 "CC1=NC(SN1)=N[CH]2CCC[CH]2CO" LF6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=N/C(=N/[C@@H]2CCC[C@H]2CO)/SN1" LF6 SMILES "OpenEye OEToolkits" 2.0.7 "CC1=NC(=NC2CCCC2CO)SN1" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LF6 "SYSTEMATIC NAME" ACDLabs 12.01 "{(1R,2R)-2-[(Z)-(3-methyl-1,2,4-thiadiazol-5(2H)-ylidene)amino]cyclopentyl}methanol" LF6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(1~{R},2~{R})-2-[(~{Z})-(3-methyl-2~{H}-1,2,4-thiadiazol-5-ylidene)amino]cyclopentyl]methanol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LF6 "Create component" 2022-03-04 RCSB LF6 "Initial release" 2022-03-16 RCSB ##