data_LHT # _chem_comp.id LHT _chem_comp.name "hydrolysed ertapenem" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H27 N3 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-08-19 _chem_comp.pdbx_modified_date 2020-03-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 493.530 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LHT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6RZS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LHT C11 C1 C 0 1 Y N N -6.397 16.437 -17.943 -8.340 -0.271 -0.163 C11 LHT 1 LHT C18 C2 C 0 1 N N S -12.101 5.895 -16.134 4.589 -0.323 -0.457 C18 LHT 2 LHT C17 C3 C 0 1 N N N -12.526 9.473 -15.290 2.189 2.496 -0.554 C17 LHT 3 LHT C6 C4 C 0 1 N N S -7.153 10.418 -15.624 -2.109 -1.946 -0.536 C6 LHT 4 LHT O6 O1 O 0 1 N N N -14.823 5.933 -15.152 7.180 1.834 0.405 O6 LHT 5 LHT C5 C5 C 0 1 N N N -9.390 10.878 -15.877 -0.169 -0.728 -1.245 C5 LHT 6 LHT O5 O2 O 0 1 N N N -12.715 10.425 -15.948 1.118 2.683 -0.006 O5 LHT 7 LHT C16 C6 C 0 1 N N N -12.095 8.215 -15.948 2.887 1.283 -0.346 C16 LHT 8 LHT C4 C7 C 0 1 N N S -9.240 9.473 -16.351 0.034 -1.125 0.238 C4 LHT 9 LHT O4 O3 O 0 1 N N N -12.616 9.430 -14.126 2.711 3.446 -1.360 O4 LHT 10 LHT C3 C8 C 0 1 N N N -11.250 7.950 -16.930 2.395 0.253 0.367 C3 LHT 11 LHT C2 C9 C 0 1 N N R -10.991 6.468 -16.965 3.412 -0.866 0.373 C2 LHT 12 LHT C15 C10 C 0 1 N N N -7.731 9.282 -16.476 -1.429 -1.339 0.709 C15 LHT 13 LHT C1 C11 C 0 1 N N N -10.681 5.794 -18.273 3.863 -1.169 1.804 C1 LHT 14 LHT C12 C12 C 0 1 Y N N -7.538 15.714 -18.223 -7.279 0.499 0.317 C12 LHT 15 LHT C19 C13 C 0 1 N N S -13.361 5.413 -16.839 5.858 -0.251 0.394 C19 LHT 16 LHT C10 C14 C 0 1 Y N N -5.472 15.961 -17.031 -8.123 -1.575 -0.558 C10 LHT 17 LHT C21 C15 C 0 1 N N R -13.686 3.933 -16.652 6.492 -1.641 0.482 C21 LHT 18 LHT C22 C16 C 0 1 N N N -12.691 3.018 -17.297 7.575 -1.776 -0.590 C22 LHT 19 LHT C20 C17 C 0 1 N N N -14.589 6.137 -16.298 6.833 0.707 -0.238 C20 LHT 20 LHT C7 C18 C 0 1 N N N -6.636 11.555 -16.477 -3.506 -1.402 -0.678 C7 LHT 21 LHT C8 C19 C 0 1 Y N N -6.791 14.006 -16.708 -5.791 -1.362 -0.014 C8 LHT 22 LHT C9 C20 C 0 1 Y N N -5.657 14.750 -16.410 -6.855 -2.122 -0.486 C9 LHT 23 LHT C13 C21 C 0 1 N N N -8.505 16.228 -19.222 -7.509 1.896 0.742 C13 LHT 24 LHT C14 C22 C 0 1 Y N N -7.722 14.488 -17.621 -6.001 -0.055 0.396 C14 LHT 25 LHT O7 O4 O 0 1 N N N -15.158 6.935 -17.008 7.304 0.462 -1.324 O7 LHT 26 LHT S1 S1 S 0 1 N N N -10.274 9.099 -17.795 0.825 0.215 1.164 S1 LHT 27 LHT N1 N1 N 0 1 N N N -8.323 10.868 -14.901 -1.299 -1.562 -1.707 N1 LHT 28 LHT O1 O5 O 0 1 N N N -5.983 11.353 -17.483 -3.728 -0.496 -1.454 O1 LHT 29 LHT N2 N2 N 0 1 N N N -6.960 12.786 -16.028 -4.510 -1.921 0.057 N2 LHT 30 LHT O2 O6 O 0 1 N N N -8.274 17.174 -19.900 -6.584 2.563 1.159 O2 LHT 31 LHT O3 O7 O 0 1 N N N -9.585 15.570 -19.324 -8.744 2.428 0.666 O3 LHT 32 LHT N3 N3 N 0 1 N N N -12.385 7.102 -15.378 4.167 1.024 -0.863 N3 LHT 33 LHT O8 O8 O 0 1 N N N -13.891 3.628 -15.277 7.077 -1.816 1.774 O8 LHT 34 LHT H1 H1 H 0 1 N N N -6.225 17.381 -18.439 -9.332 0.153 -0.221 H1 LHT 35 LHT H2 H2 H 0 1 N N N -11.713 5.103 -15.477 4.755 -0.949 -1.334 H2 LHT 36 LHT H3 H3 H 0 1 N N N -6.370 10.041 -14.950 -2.141 -3.032 -0.448 H3 LHT 37 LHT H4 H4 H 0 1 N N N -15.533 6.496 -14.868 7.749 2.453 -0.071 H4 LHT 38 LHT H5 H5 H 0 1 N N N -9.216 11.610 -16.679 -0.420 0.329 -1.325 H5 LHT 39 LHT H6 H6 H 0 1 N N N -10.373 11.062 -15.419 0.727 -0.949 -1.825 H6 LHT 40 LHT H7 H7 H 0 1 N N N -9.602 8.800 -15.560 0.610 -2.046 0.321 H7 LHT 41 LHT H8 H8 H 0 1 N N N -12.866 10.285 -13.795 2.162 4.238 -1.440 H8 LHT 42 LHT H9 H9 H 0 1 N N N -10.085 6.328 -16.357 2.997 -1.759 -0.093 H9 LHT 43 LHT H10 H10 H 0 1 N N N -7.425 8.301 -16.083 -1.891 -0.388 0.975 H10 LHT 44 LHT H11 H11 H 0 1 N N N -7.409 9.374 -17.524 -1.466 -2.035 1.546 H11 LHT 45 LHT H12 H12 H 0 1 N N N -10.522 4.719 -18.103 3.217 -1.935 2.234 H12 LHT 46 LHT H13 H13 H 0 1 N N N -11.523 5.935 -18.967 4.893 -1.527 1.792 H13 LHT 47 LHT H14 H14 H 0 1 N N N -9.771 6.235 -18.706 3.801 -0.262 2.405 H14 LHT 48 LHT H15 H15 H 0 1 N N N -13.270 5.623 -17.915 5.604 0.096 1.396 H15 LHT 49 LHT H16 H16 H 0 1 N N N -4.594 16.548 -16.805 -8.946 -2.170 -0.925 H16 LHT 50 LHT H17 H17 H 0 1 N N N -14.642 3.764 -17.169 5.727 -2.401 0.323 H17 LHT 51 LHT H18 H18 H 0 1 N N N -12.987 1.973 -17.123 8.341 -1.016 -0.431 H18 LHT 52 LHT H19 H19 H 0 1 N N N -12.660 3.215 -18.379 8.027 -2.765 -0.527 H19 LHT 53 LHT H20 H20 H 0 1 N N N -11.696 3.195 -16.863 7.129 -1.641 -1.576 H20 LHT 54 LHT H21 H21 H 0 1 N N N -4.931 14.382 -15.700 -6.691 -3.143 -0.796 H21 LHT 55 LHT H22 H22 H 0 1 N N N -8.595 13.898 -17.860 -5.176 0.536 0.766 H22 LHT 56 LHT H23 H23 H 0 1 N N N -8.176 11.786 -14.532 -1.858 -1.069 -2.387 H23 LHT 57 LHT H25 H25 H 0 1 N N N -7.363 12.836 -15.114 -4.344 -2.681 0.635 H25 LHT 58 LHT H26 H26 H 0 1 N N N -10.129 15.957 -20.000 -8.845 3.345 0.955 H26 LHT 59 LHT H27 H27 H 0 1 N N N -13.364 7.110 -15.175 4.690 1.638 -1.401 H27 LHT 60 LHT H28 H28 H 0 1 N N N -14.527 4.231 -14.910 7.608 -1.065 2.072 H28 LHT 61 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LHT O2 C13 DOUB N N 1 LHT O3 C13 SING N N 2 LHT C13 C12 SING N N 3 LHT C1 C2 SING N N 4 LHT C12 C11 DOUB Y N 5 LHT C12 C14 SING Y N 6 LHT C11 C10 SING Y N 7 LHT S1 C3 SING N N 8 LHT S1 C4 SING N N 9 LHT C14 C8 DOUB Y N 10 LHT O1 C7 DOUB N N 11 LHT C22 C21 SING N N 12 LHT C10 C9 DOUB Y N 13 LHT O7 C20 DOUB N N 14 LHT C2 C3 SING N N 15 LHT C2 C18 SING N N 16 LHT C3 C16 DOUB N N 17 LHT C19 C21 SING N N 18 LHT C19 C20 SING N N 19 LHT C19 C18 SING N N 20 LHT C8 C9 SING Y N 21 LHT C8 N2 SING N N 22 LHT C21 O8 SING N N 23 LHT C7 N2 SING N N 24 LHT C7 C6 SING N N 25 LHT C15 C4 SING N N 26 LHT C15 C6 SING N N 27 LHT C4 C5 SING N N 28 LHT C20 O6 SING N N 29 LHT C18 N3 SING N N 30 LHT C16 N3 SING N N 31 LHT C16 C17 SING N N 32 LHT O5 C17 DOUB N N 33 LHT C5 N1 SING N N 34 LHT C6 N1 SING N N 35 LHT C17 O4 SING N N 36 LHT C11 H1 SING N N 37 LHT C18 H2 SING N N 38 LHT C6 H3 SING N N 39 LHT O6 H4 SING N N 40 LHT C5 H5 SING N N 41 LHT C5 H6 SING N N 42 LHT C4 H7 SING N N 43 LHT O4 H8 SING N N 44 LHT C2 H9 SING N N 45 LHT C15 H10 SING N N 46 LHT C15 H11 SING N N 47 LHT C1 H12 SING N N 48 LHT C1 H13 SING N N 49 LHT C1 H14 SING N N 50 LHT C19 H15 SING N N 51 LHT C10 H16 SING N N 52 LHT C21 H17 SING N N 53 LHT C22 H18 SING N N 54 LHT C22 H19 SING N N 55 LHT C22 H20 SING N N 56 LHT C9 H21 SING N N 57 LHT C14 H22 SING N N 58 LHT N1 H23 SING N N 59 LHT N2 H25 SING N N 60 LHT O3 H26 SING N N 61 LHT N3 H27 SING N N 62 LHT O8 H28 SING N N 63 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LHT InChI InChI 1.03 "InChI=1S/C22H27N3O8S/c1-9-16(15(10(2)26)21(30)31)25-17(22(32)33)18(9)34-13-7-14(23-8-13)19(27)24-12-5-3-4-11(6-12)20(28)29/h3-6,9-10,13-16,23,25-26H,7-8H2,1-2H3,(H,24,27)(H,28,29)(H,30,31)(H,32,33)/t9-,10-,13+,14+,15-,16-/m1/s1" LHT InChIKey InChI 1.03 LMDXYCKWMWUYCV-ANEDZVCMSA-N LHT SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O)[C@H]([C@@H]1NC(=C(S[C@@H]2CN[C@@H](C2)C(=O)Nc3cccc(c3)C(O)=O)[C@@H]1C)C(O)=O)C(O)=O" LHT SMILES CACTVS 3.385 "C[CH](O)[CH]([CH]1NC(=C(S[CH]2CN[CH](C2)C(=O)Nc3cccc(c3)C(O)=O)[CH]1C)C(O)=O)C(O)=O" LHT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1[C@@H](NC(=C1S[C@H]2C[C@H](NC2)C(=O)Nc3cccc(c3)C(=O)O)C(=O)O)[C@@H]([C@@H](C)O)C(=O)O" LHT SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(NC(=C1SC2CC(NC2)C(=O)Nc3cccc(c3)C(=O)O)C(=O)O)C(C(C)O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id LHT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl]sulfanyl-3-methyl-2,3-dihydro-1~{H}-pyrrole-5-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LHT "Create component" 2019-08-19 EBI LHT "Initial release" 2020-04-01 RCSB ##