data_LI8 # _chem_comp.id LI8 _chem_comp.name "N-(3-{[5-BROMO-2-({3-[(PYRROLIDIN-1-YLCARBONYL)AMINO]PHENYL}AMINO)PYRIMIDIN-4-YL]AMINO}PROPYL)-2,2-DIMETHYLMALONAMIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H31 Br N8 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-03-21 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 547.448 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LI8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1Z5M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LI8 C1 C1 C 0 1 Y N N -8.746 43.496 43.496 0.173 3.289 0.322 C1 LI8 1 LI8 C2 C2 C 0 1 Y N N -7.390 43.556 43.964 0.696 2.026 0.034 C2 LI8 2 LI8 N3 N3 N 0 1 Y N N -6.770 42.383 44.231 -0.126 1.066 -0.376 N3 LI8 3 LI8 C4 C4 C 0 1 Y N N -7.361 41.177 44.069 -1.422 1.301 -0.515 C4 LI8 4 LI8 N5 N5 N 0 1 Y N N -8.625 41.134 43.613 -1.945 2.490 -0.254 N5 LI8 5 LI8 C6 C6 C 0 1 Y N N -9.323 42.238 43.329 -1.184 3.493 0.159 C6 LI8 6 LI8 BR7 BR7 BR 0 0 N N N -9.806 44.989 43.127 1.298 4.691 0.910 BR7 LI8 7 LI8 N8 N8 N 0 1 N N N -6.768 40.008 44.326 -2.252 0.278 -0.944 N8 LI8 8 LI8 C10 C10 C 0 1 Y N N -5.572 39.760 44.874 -3.600 0.537 -1.214 C10 LI8 9 LI8 C11 C11 C 0 1 Y N N -4.462 40.667 44.893 -4.570 -0.386 -0.852 C11 LI8 10 LI8 C12 C12 C 0 1 Y N N -3.241 40.299 45.507 -5.907 -0.122 -1.116 C12 LI8 11 LI8 C13 C13 C 0 1 Y N N -3.141 39.003 46.100 -6.268 1.059 -1.751 C13 LI8 12 LI8 C14 C14 C 0 1 Y N N -4.225 38.102 46.086 -5.298 1.974 -2.116 C14 LI8 13 LI8 C15 C15 C 0 1 Y N N -5.434 38.491 45.478 -3.967 1.717 -1.849 C15 LI8 14 LI8 N16 N16 N 0 1 N N N -2.236 41.205 45.526 -6.889 -1.048 -0.747 N16 LI8 15 LI8 C18 C18 C 0 1 N N N -0.994 41.096 45.057 -6.765 -1.741 0.402 C18 LI8 16 LI8 O19 O19 O 0 1 N N N -0.637 40.057 44.464 -5.839 -1.509 1.154 O19 LI8 17 LI8 N20 N20 N 0 1 N N N -0.091 42.083 45.245 -7.669 -2.690 0.718 N20 LI8 18 LI8 C21 C21 C 0 1 N N N -0.345 43.305 45.924 -7.654 -3.517 1.933 C21 LI8 19 LI8 C22 C22 C 0 1 N N N 0.998 43.646 46.620 -8.860 -4.475 1.850 C22 LI8 20 LI8 C23 C23 C 0 1 N N N 2.017 42.618 46.044 -9.162 -4.523 0.329 C23 LI8 21 LI8 C24 C24 C 0 1 N N N 1.275 41.994 44.853 -8.839 -3.067 -0.096 C24 LI8 22 LI8 N25 N25 N 0 1 N N N -6.737 44.734 44.156 2.051 1.777 0.178 N25 LI8 23 LI8 C27 C27 C 0 1 N N N -5.441 44.880 44.741 2.588 0.447 -0.122 C27 LI8 24 LI8 C28 C28 C 0 1 N N N -4.308 44.649 43.719 4.099 0.441 0.118 C28 LI8 25 LI8 N29 N29 N 0 1 N N N -4.685 46.901 42.728 6.106 -0.954 0.034 N29 LI8 26 LI8 C31 C31 C 0 1 N N N -3.842 47.749 43.386 6.817 -2.079 -0.179 C31 LI8 27 LI8 O32 O32 O 0 1 N N N -2.728 47.280 43.801 6.259 -3.086 -0.560 O32 LI8 28 LI8 C33 C33 C 0 1 N N N -4.423 45.514 42.444 4.659 -0.948 -0.196 C33 LI8 29 LI8 C34 C34 C 0 1 N N N -4.159 49.233 43.638 8.305 -2.086 0.057 C34 LI8 30 LI8 C35 C35 C 0 1 N N N -2.822 50.050 43.616 8.591 -1.738 1.519 C35 LI8 31 LI8 C36 C36 C 0 1 N N N -5.088 49.853 42.527 8.970 -1.051 -0.852 C36 LI8 32 LI8 C37 C37 C 0 1 N N N -4.764 49.403 44.987 8.857 -3.454 -0.252 C37 LI8 33 LI8 O38 O38 O 0 1 N N N -5.837 50.019 45.191 8.115 -4.337 -0.626 O38 LI8 34 LI8 N39 N39 N 0 1 N N N -4.180 48.911 46.075 10.175 -3.696 -0.111 N39 LI8 35 LI8 H6 H6 H 0 1 N N N -10.356 42.113 42.963 -1.620 4.459 0.369 H6 LI8 36 LI8 HN8 HN8 H 0 1 N N N -6.763 39.509 43.436 -1.899 -0.618 -1.057 HN8 LI8 37 LI8 H11 H11 H 0 1 N N N -4.548 41.663 44.428 -4.287 -1.304 -0.358 H11 LI8 38 LI8 H13 H13 H 0 1 N N N -2.200 38.689 46.582 -7.308 1.263 -1.961 H13 LI8 39 LI8 H14 H14 H 0 1 N N N -4.128 37.104 46.545 -5.582 2.891 -2.610 H14 LI8 40 LI8 H15 H15 H 0 1 N N N -6.286 37.790 45.474 -3.212 2.434 -2.135 H15 LI8 41 LI8 H16 H16 H 0 1 N N N -2.131 41.471 46.505 -7.660 -1.191 -1.319 H16 LI8 42 LI8 H211 1H21 H 0 0 N N N -0.737 44.117 45.268 -6.728 -4.090 1.981 H211 LI8 43 LI8 H212 2H21 H 0 0 N N N -1.219 43.269 46.614 -7.744 -2.882 2.815 H212 LI8 44 LI8 H221 1H22 H 0 0 N N N 1.311 44.709 46.502 -8.593 -5.464 2.222 H221 LI8 45 LI8 H222 2H22 H 0 0 N N N 0.942 43.653 47.733 -9.711 -4.072 2.400 H222 LI8 46 LI8 H231 1H23 H 0 0 N N N 3.012 43.050 45.789 -8.510 -5.235 -0.176 H231 LI8 47 LI8 H232 2H23 H 0 0 N N N 2.395 41.879 46.788 -10.211 -4.758 0.146 H232 LI8 48 LI8 H241 1H24 H 0 0 N N N 1.614 40.968 44.578 -9.684 -2.412 0.119 H241 LI8 49 LI8 H242 2H24 H 0 0 N N N 1.507 42.457 43.865 -8.588 -3.028 -1.156 H242 LI8 50 LI8 H25 H25 H 0 1 N N N -7.366 45.331 44.692 2.645 2.483 0.478 H25 LI8 51 LI8 H271 1H27 H 0 0 N N N -5.334 45.870 45.242 2.384 0.200 -1.164 H271 LI8 52 LI8 H272 2H27 H 0 0 N N N -5.323 44.216 45.629 2.114 -0.290 0.526 H272 LI8 53 LI8 H281 1H28 H 0 0 N N N -3.312 44.792 44.200 4.303 0.688 1.159 H281 LI8 54 LI8 H282 2H28 H 0 0 N N N -4.235 43.568 43.453 4.573 1.178 -0.530 H282 LI8 55 LI8 H29 H29 H 0 1 N N N -5.562 47.328 42.431 6.552 -0.149 0.339 H29 LI8 56 LI8 H331 1H33 H 0 0 N N N -3.516 45.402 41.804 4.455 -1.196 -1.238 H331 LI8 57 LI8 H332 2H33 H 0 0 N N N -5.188 45.098 41.748 4.185 -1.686 0.452 H332 LI8 58 LI8 H351 1H35 H 0 0 N N N -3.051 51.125 43.798 8.192 -0.749 1.743 H351 LI8 59 LI8 H352 2H35 H 0 0 N N N -2.067 49.649 44.332 8.118 -2.476 2.167 H352 LI8 60 LI8 H353 3H35 H 0 0 N N N -2.243 49.892 42.675 9.668 -1.743 1.690 H353 LI8 61 LI8 H361 1H36 H 0 0 N N N -5.317 50.928 42.709 10.047 -1.055 -0.682 H361 LI8 62 LI8 H362 2H36 H 0 0 N N N -4.651 49.703 41.511 8.767 -1.298 -1.894 H362 LI8 63 LI8 H363 3H36 H 0 0 N N N -6.023 49.258 42.410 8.571 -0.061 -0.629 H363 LI8 64 LI8 H391 1H39 H 0 0 N N N -3.307 48.409 45.909 10.769 -2.990 0.188 H391 LI8 65 LI8 H392 2H39 H 0 0 N N N -4.594 49.027 46.999 10.530 -4.577 -0.310 H392 LI8 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LI8 C1 C2 DOUB Y N 1 LI8 C1 C6 SING Y N 2 LI8 C1 BR7 SING N N 3 LI8 C2 N3 SING Y N 4 LI8 C2 N25 SING N N 5 LI8 N3 C4 DOUB Y N 6 LI8 C4 N5 SING Y N 7 LI8 C4 N8 SING N N 8 LI8 N5 C6 DOUB Y N 9 LI8 C6 H6 SING N N 10 LI8 N8 C10 SING N N 11 LI8 N8 HN8 SING N N 12 LI8 C10 C11 DOUB Y N 13 LI8 C10 C15 SING Y N 14 LI8 C11 C12 SING Y N 15 LI8 C11 H11 SING N N 16 LI8 C12 C13 DOUB Y N 17 LI8 C12 N16 SING N N 18 LI8 C13 C14 SING Y N 19 LI8 C13 H13 SING N N 20 LI8 C14 C15 DOUB Y N 21 LI8 C14 H14 SING N N 22 LI8 C15 H15 SING N N 23 LI8 N16 C18 SING N N 24 LI8 N16 H16 SING N N 25 LI8 C18 O19 DOUB N N 26 LI8 C18 N20 SING N N 27 LI8 N20 C21 SING N N 28 LI8 N20 C24 SING N N 29 LI8 C21 C22 SING N N 30 LI8 C21 H211 SING N N 31 LI8 C21 H212 SING N N 32 LI8 C22 C23 SING N N 33 LI8 C22 H221 SING N N 34 LI8 C22 H222 SING N N 35 LI8 C23 C24 SING N N 36 LI8 C23 H231 SING N N 37 LI8 C23 H232 SING N N 38 LI8 C24 H241 SING N N 39 LI8 C24 H242 SING N N 40 LI8 N25 C27 SING N N 41 LI8 N25 H25 SING N N 42 LI8 C27 C28 SING N N 43 LI8 C27 H271 SING N N 44 LI8 C27 H272 SING N N 45 LI8 C28 C33 SING N N 46 LI8 C28 H281 SING N N 47 LI8 C28 H282 SING N N 48 LI8 N29 C31 SING N N 49 LI8 N29 C33 SING N N 50 LI8 N29 H29 SING N N 51 LI8 C31 O32 DOUB N N 52 LI8 C31 C34 SING N N 53 LI8 C33 H331 SING N N 54 LI8 C33 H332 SING N N 55 LI8 C34 C35 SING N N 56 LI8 C34 C36 SING N N 57 LI8 C34 C37 SING N N 58 LI8 C35 H351 SING N N 59 LI8 C35 H352 SING N N 60 LI8 C35 H353 SING N N 61 LI8 C36 H361 SING N N 62 LI8 C36 H362 SING N N 63 LI8 C36 H363 SING N N 64 LI8 C37 O38 DOUB N N 65 LI8 C37 N39 SING N N 66 LI8 N39 H391 SING N N 67 LI8 N39 H392 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LI8 SMILES ACDLabs 10.04 "O=C(Nc2cccc(Nc1nc(NCCCNC(=O)C(C(=O)N)(C)C)c(Br)cn1)c2)N3CCCC3" LI8 SMILES_CANONICAL CACTVS 3.341 "CC(C)(C(N)=O)C(=O)NCCCNc1nc(Nc2cccc(NC(=O)N3CCCC3)c2)ncc1Br" LI8 SMILES CACTVS 3.341 "CC(C)(C(N)=O)C(=O)NCCCNc1nc(Nc2cccc(NC(=O)N3CCCC3)c2)ncc1Br" LI8 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)(C(=O)N)C(=O)NCCCNc1c(cnc(n1)Nc2cccc(c2)NC(=O)N3CCCC3)Br" LI8 SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)(C(=O)N)C(=O)NCCCNc1c(cnc(n1)Nc2cccc(c2)NC(=O)N3CCCC3)Br" LI8 InChI InChI 1.03 "InChI=1S/C23H31BrN8O3/c1-23(2,19(25)33)20(34)27-10-6-9-26-18-17(24)14-28-21(31-18)29-15-7-5-8-16(13-15)30-22(35)32-11-3-4-12-32/h5,7-8,13-14H,3-4,6,9-12H2,1-2H3,(H2,25,33)(H,27,34)(H,30,35)(H2,26,28,29,31)" LI8 InChIKey InChI 1.03 ZNSULAZTNWFKEW-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LI8 "SYSTEMATIC NAME" ACDLabs 10.04 "N-(3-{[5-bromo-2-({3-[(pyrrolidin-1-ylcarbonyl)amino]phenyl}amino)pyrimidin-4-yl]amino}propyl)-2,2-dimethylpropanediamide" LI8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "N'-[3-[[5-bromo-2-[[3-(pyrrolidin-1-ylcarbonylamino)phenyl]amino]pyrimidin-4-yl]amino]propyl]-2,2-dimethyl-propanediamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LI8 "Create component" 2005-03-21 RCSB LI8 "Modify descriptor" 2011-06-04 RCSB #