data_LIO # _chem_comp.id LIO _chem_comp.name "[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H67 N O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 1999-12-15 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 636.861 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LIO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1DMH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LIO C1 C1 C 0 1 N N N 2.273 68.844 98.854 -3.323 2.288 -1.795 C1 LIO 1 LIO C2 C2 C 0 1 N N R 1.993 70.068 99.438 -3.497 1.006 -2.612 C2 LIO 2 LIO C3 C3 C 0 1 N N N 3.094 70.893 99.272 -2.152 0.600 -3.218 C3 LIO 3 LIO C4 C4 C 0 1 N N N 4.150 65.214 97.380 -1.130 4.502 1.957 C4 LIO 4 LIO C5 C5 C 0 1 N N N 3.915 63.685 97.448 -0.145 4.390 3.123 C5 LIO 5 LIO C6 C6 C 0 1 N N N 5.368 63.218 95.507 1.477 5.460 1.716 C6 LIO 6 LIO C7 C7 C 0 1 N N N 4.779 61.451 97.032 2.178 4.342 3.719 C7 LIO 7 LIO C8 C8 C 0 1 N N N 6.301 63.150 97.737 1.394 3.066 1.845 C8 LIO 8 LIO C11 C11 C 0 1 N N N 5.293 71.576 98.488 0.100 0.135 -2.461 C11 LIO 9 LIO C12 C12 C 0 1 N N N 4.901 72.950 99.097 1.128 0.014 -1.365 C12 LIO 10 LIO C13 C13 C 0 1 N N N 5.573 74.081 98.317 2.473 -0.392 -1.971 C13 LIO 11 LIO C14 C14 C 0 1 N N N 5.206 75.443 98.899 3.516 -0.515 -0.858 C14 LIO 12 LIO C15 C15 C 0 1 N N N 4.978 76.395 97.734 4.861 -0.921 -1.464 C15 LIO 13 LIO C16 C16 C 0 1 N N N 5.422 77.806 98.077 5.905 -1.044 -0.352 C16 LIO 14 LIO C17 C17 C 0 1 N N N 5.162 78.681 96.852 7.250 -1.450 -0.957 C17 LIO 15 LIO C18 C18 C 0 1 N N N 5.284 80.160 97.207 8.293 -1.573 0.155 C18 LIO 16 LIO C19 C19 C 0 1 N N N 3.945 80.847 96.948 9.639 -1.979 -0.450 C19 LIO 17 LIO C20 C20 C 0 1 N N N 4.040 81.682 95.678 10.682 -2.102 0.662 C20 LIO 18 LIO C21 C21 C 0 1 N N N 2.635 82.108 95.254 12.027 -2.508 0.057 C21 LIO 19 LIO C22 C22 C 0 1 N N N 2.737 83.041 94.040 13.071 -2.631 1.169 C22 LIO 20 LIO C23 C23 C 0 1 N N N 1.357 83.184 93.412 14.416 -3.037 0.564 C23 LIO 21 LIO C24 C24 C 0 1 N N N 1.428 84.105 92.209 15.459 -3.160 1.676 C24 LIO 22 LIO C25 C25 C 0 1 N N N 0.179 83.900 91.368 16.804 -3.567 1.070 C25 LIO 23 LIO C31 C31 C 0 1 N N N 0.081 71.935 99.427 -5.299 -0.245 -1.590 C31 LIO 24 LIO C32 C32 C 0 1 N N N 0.765 72.964 100.337 -5.800 -1.348 -0.693 C32 LIO 25 LIO C33 C33 C 0 1 N N N 1.113 74.207 99.499 -7.330 -1.346 -0.688 C33 LIO 26 LIO C34 C34 C 0 1 N N N 0.304 75.412 99.976 -7.839 -2.465 0.222 C34 LIO 27 LIO C35 C35 C 0 1 N N N 1.209 76.636 100.020 -9.369 -2.463 0.227 C35 LIO 28 LIO C36 C36 C 0 1 N N N 0.411 77.883 99.665 -9.877 -3.583 1.137 C36 LIO 29 LIO C37 C37 C 0 1 N N N 0.991 79.077 100.424 -11.407 -3.581 1.142 C37 LIO 30 LIO C38 C38 C 0 1 N N N 0.207 80.352 100.088 -11.916 -4.701 2.052 C38 LIO 31 LIO C39 C39 C 0 1 N N N -0.912 80.567 101.120 -13.446 -4.698 2.058 C39 LIO 32 LIO C40 C40 C 0 1 N N N -1.089 82.067 101.383 -13.954 -5.818 2.968 C40 LIO 33 LIO N N N 1 1 N N N 5.088 62.889 96.929 1.226 4.315 2.601 N LIO 34 LIO O2 O2 O 0 1 N N N 0.668 70.634 99.024 -3.980 -0.056 -1.749 O2 LIO 35 LIO O3 O3 O 0 1 N N N 4.309 70.484 98.594 -1.162 0.484 -2.162 O3 LIO 36 LIO O11 O11 O 0 1 N N N 6.378 71.388 97.933 0.411 -0.081 -3.608 O11 LIO 37 LIO O31 O31 O 0 1 N N N -1.037 72.218 98.987 -6.085 0.470 -2.165 O31 LIO 38 LIO O1P O1P O 0 1 N N N 4.382 67.095 99.770 -1.651 4.640 -0.989 O1P LIO 39 LIO O2P O2P O 0 1 N N N 2.691 65.333 100.107 -3.487 3.847 0.551 O2P LIO 40 LIO O3P O3P O 0 1 N N N 1.931 67.596 99.507 -2.294 2.096 -0.821 O3P LIO 41 LIO O4P O4P O 0 1 N N N 3.141 66.175 97.833 -1.112 3.289 1.201 O4P LIO 42 LIO P P P 0 1 N N R 3.041 66.562 99.300 -2.165 3.476 -0.003 P LIO 43 LIO H11 1H1 H 0 1 N N N 1.814 68.836 97.837 -3.046 3.107 -2.459 H11 LIO 44 LIO H12 2H1 H 0 1 N N N 3.362 68.819 98.616 -4.259 2.529 -1.292 H12 LIO 45 LIO H21 1H2 H 0 1 N N N 1.841 69.948 100.536 -4.218 1.180 -3.412 H21 LIO 46 LIO H31 1H3 H 0 1 N N N 2.736 71.824 98.773 -1.832 1.357 -3.934 H31 LIO 47 LIO H32 2H3 H 0 1 N N N 3.388 71.257 100.283 -2.257 -0.359 -3.725 H32 LIO 48 LIO H41 1H4 H 0 1 N N N 5.098 65.436 97.921 -0.840 5.334 1.315 H41 LIO 49 LIO H42 2H4 H 0 1 N N N 4.415 65.470 96.328 -2.134 4.674 2.344 H42 LIO 50 LIO H51 1H5 H 0 1 N N N 3.643 63.368 98.482 -0.242 5.266 3.765 H51 LIO 51 LIO H52 2H5 H 0 1 N N N 2.975 63.401 96.919 -0.365 3.491 3.699 H52 LIO 52 LIO H61 1H6 H 0 1 N N N 6.234 62.630 95.123 1.352 6.387 2.277 H61 LIO 53 LIO H62 2H6 H 0 1 N N N 4.464 63.082 94.868 2.494 5.404 1.329 H62 LIO 54 LIO H63 3H6 H 0 1 N N N 5.517 64.313 95.360 0.770 5.440 0.886 H63 LIO 55 LIO H71 1H7 H 0 1 N N N 5.645 60.863 96.648 1.992 3.492 4.375 H71 LIO 56 LIO H72 2H7 H 0 1 N N N 4.488 61.152 98.066 3.195 4.286 3.332 H72 LIO 57 LIO H73 3H7 H 0 1 N N N 3.825 61.184 96.518 2.053 5.268 4.280 H73 LIO 58 LIO H81 1H8 H 0 1 N N N 7.167 62.562 97.353 0.833 3.128 0.912 H81 LIO 59 LIO H82 2H8 H 0 1 N N N 6.533 64.239 97.791 2.450 2.914 1.625 H82 LIO 60 LIO H83 3H8 H 0 1 N N N 6.122 62.961 98.821 1.022 2.230 2.437 H83 LIO 61 LIO H121 1H12 H 0 0 N N N 3.795 73.081 99.153 0.808 -0.743 -0.649 H121 LIO 62 LIO H122 2H12 H 0 0 N N N 5.127 73.003 100.187 1.232 0.973 -0.858 H122 LIO 63 LIO H131 1H13 H 0 0 N N N 6.678 73.942 98.262 2.792 0.365 -2.687 H131 LIO 64 LIO H132 2H13 H 0 0 N N N 5.340 74.023 97.228 2.368 -1.351 -2.478 H132 LIO 65 LIO H141 1H14 H 0 0 N N N 4.338 75.396 99.597 3.197 -1.272 -0.142 H141 LIO 66 LIO H142 2H14 H 0 0 N N N 5.960 75.821 99.627 3.621 0.444 -0.351 H142 LIO 67 LIO H151 1H15 H 0 0 N N N 5.469 76.026 96.803 5.181 -0.164 -2.180 H151 LIO 68 LIO H152 2H15 H 0 0 N N N 3.917 76.372 97.389 4.757 -1.880 -1.971 H152 LIO 69 LIO H161 1H16 H 0 0 N N N 4.940 78.200 99.002 5.585 -1.801 0.364 H161 LIO 70 LIO H162 2H16 H 0 0 N N N 6.478 77.855 98.429 6.009 -0.085 0.156 H162 LIO 71 LIO H171 1H17 H 0 0 N N N 5.825 78.405 95.999 7.570 -0.693 -1.673 H171 LIO 72 LIO H172 2H17 H 0 0 N N N 4.178 78.449 96.380 7.145 -2.409 -1.465 H172 LIO 73 LIO H181 1H18 H 0 0 N N N 5.647 80.317 98.249 7.974 -2.330 0.871 H181 LIO 74 LIO H182 2H18 H 0 0 N N N 6.126 80.656 96.671 8.398 -0.614 0.663 H182 LIO 75 LIO H191 1H19 H 0 0 N N N 3.099 80.121 96.913 9.958 -1.222 -1.166 H191 LIO 76 LIO H192 2H19 H 0 0 N N N 3.603 81.448 97.822 9.534 -2.938 -0.958 H192 LIO 77 LIO H201 1H20 H 0 0 N N N 4.730 82.550 95.792 10.362 -2.859 1.378 H201 LIO 78 LIO H202 2H20 H 0 0 N N N 4.586 81.153 94.862 10.787 -1.143 1.170 H202 LIO 79 LIO H211 1H21 H 0 0 N N N 1.967 81.235 95.063 12.347 -1.751 -0.659 H211 LIO 80 LIO H212 2H21 H 0 0 N N N 2.059 82.565 96.092 11.923 -3.467 -0.451 H212 LIO 81 LIO H221 1H22 H 0 0 N N N 3.191 84.026 94.297 12.751 -3.389 1.885 H221 LIO 82 LIO H222 2H22 H 0 0 N N N 3.505 82.702 93.306 13.175 -1.673 1.677 H222 LIO 83 LIO H231 1H23 H 0 0 N N N 0.909 82.195 93.155 14.735 -2.280 -0.152 H231 LIO 84 LIO H232 2H23 H 0 0 N N N 0.593 83.520 94.151 14.311 -3.996 0.056 H232 LIO 85 LIO H241 1H24 H 0 0 N N N 1.579 85.171 92.495 15.140 -3.918 2.392 H241 LIO 86 LIO H242 2H24 H 0 0 N N N 2.365 83.969 91.621 15.564 -2.202 2.183 H242 LIO 87 LIO H251 1H25 H 0 0 N N N 0.231 84.577 90.483 17.548 -3.654 1.863 H251 LIO 88 LIO H252 2H25 H 0 0 N N N 0.027 82.833 91.081 16.700 -4.525 0.563 H252 LIO 89 LIO H253 3H25 H 0 0 N N N -0.758 84.035 91.955 17.124 -2.809 0.354 H253 LIO 90 LIO H321 1H32 H 0 0 N N N 0.153 73.212 101.235 -5.439 -2.308 -1.062 H321 LIO 91 LIO H322 2H32 H 0 0 N N N 1.651 72.543 100.865 -5.433 -1.187 0.320 H322 LIO 92 LIO H331 1H33 H 0 0 N N N 2.208 74.415 99.499 -7.691 -0.386 -0.319 H331 LIO 93 LIO H332 2H33 H 0 0 N N N 0.980 74.022 98.407 -7.697 -1.506 -1.702 H332 LIO 94 LIO H341 1H34 H 0 0 N N N -0.607 75.581 99.357 -7.478 -3.426 -0.147 H341 LIO 95 LIO H342 2H34 H 0 0 N N N -0.201 75.223 100.952 -7.472 -2.305 1.236 H342 LIO 96 LIO H351 1H35 H 0 0 N N N 1.729 76.737 101.001 -9.729 -1.503 0.596 H351 LIO 97 LIO H352 2H35 H 0 0 N N N 2.108 76.515 99.371 -9.736 -2.624 -0.787 H352 LIO 98 LIO H361 1H36 H 0 0 N N N 0.366 78.059 98.565 -9.517 -4.543 0.768 H361 LIO 99 LIO H362 2H36 H 0 0 N N N -0.681 77.754 99.846 -9.510 -3.422 2.151 H362 LIO 100 LIO H371 1H37 H 0 0 N N N 1.032 78.891 101.522 -11.768 -2.621 1.511 H371 LIO 101 LIO H372 2H37 H 0 0 N N N 2.083 79.198 100.236 -11.774 -3.742 0.129 H372 LIO 102 LIO H381 1H38 H 0 0 N N N 0.873 81.242 100.001 -11.555 -5.661 1.684 H381 LIO 103 LIO H382 2H38 H 0 0 N N N -0.183 80.339 99.043 -11.549 -4.540 3.066 H382 LIO 104 LIO H391 1H39 H 0 0 N N N -1.866 80.078 100.813 -13.807 -3.738 2.427 H391 LIO 105 LIO H392 2H39 H 0 0 N N N -0.733 79.993 102.059 -13.813 -4.859 1.044 H392 LIO 106 LIO H401 1H40 H 0 0 N N N -1.900 82.222 102.131 -13.594 -6.778 2.599 H401 LIO 107 LIO H402 2H40 H 0 0 N N N -0.134 82.555 101.689 -13.587 -5.657 3.981 H402 LIO 108 LIO H403 3H40 H 0 0 N N N -1.267 82.640 100.443 -15.044 -5.817 2.971 H403 LIO 109 LIO HOP1 1HOP H 0 0 N N N 4.602 67.867 99.262 -0.789 4.359 -1.327 HOP1 LIO 110 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LIO C1 C2 SING N N 1 LIO C1 O3P SING N N 2 LIO C1 H11 SING N N 3 LIO C1 H12 SING N N 4 LIO C2 C3 SING N N 5 LIO C2 O2 SING N N 6 LIO C2 H21 SING N N 7 LIO C3 O3 SING N N 8 LIO C3 H31 SING N N 9 LIO C3 H32 SING N N 10 LIO C4 C5 SING N N 11 LIO C4 O4P SING N N 12 LIO C4 H41 SING N N 13 LIO C4 H42 SING N N 14 LIO C5 N SING N N 15 LIO C5 H51 SING N N 16 LIO C5 H52 SING N N 17 LIO C6 N SING N N 18 LIO C6 H61 SING N N 19 LIO C6 H62 SING N N 20 LIO C6 H63 SING N N 21 LIO C7 N SING N N 22 LIO C7 H71 SING N N 23 LIO C7 H72 SING N N 24 LIO C7 H73 SING N N 25 LIO C8 N SING N N 26 LIO C8 H81 SING N N 27 LIO C8 H82 SING N N 28 LIO C8 H83 SING N N 29 LIO C11 C12 SING N N 30 LIO C11 O3 SING N N 31 LIO C11 O11 DOUB N N 32 LIO C12 C13 SING N N 33 LIO C12 H121 SING N N 34 LIO C12 H122 SING N N 35 LIO C13 C14 SING N N 36 LIO C13 H131 SING N N 37 LIO C13 H132 SING N N 38 LIO C14 C15 SING N N 39 LIO C14 H141 SING N N 40 LIO C14 H142 SING N N 41 LIO C15 C16 SING N N 42 LIO C15 H151 SING N N 43 LIO C15 H152 SING N N 44 LIO C16 C17 SING N N 45 LIO C16 H161 SING N N 46 LIO C16 H162 SING N N 47 LIO C17 C18 SING N N 48 LIO C17 H171 SING N N 49 LIO C17 H172 SING N N 50 LIO C18 C19 SING N N 51 LIO C18 H181 SING N N 52 LIO C18 H182 SING N N 53 LIO C19 C20 SING N N 54 LIO C19 H191 SING N N 55 LIO C19 H192 SING N N 56 LIO C20 C21 SING N N 57 LIO C20 H201 SING N N 58 LIO C20 H202 SING N N 59 LIO C21 C22 SING N N 60 LIO C21 H211 SING N N 61 LIO C21 H212 SING N N 62 LIO C22 C23 SING N N 63 LIO C22 H221 SING N N 64 LIO C22 H222 SING N N 65 LIO C23 C24 SING N N 66 LIO C23 H231 SING N N 67 LIO C23 H232 SING N N 68 LIO C24 C25 SING N N 69 LIO C24 H241 SING N N 70 LIO C24 H242 SING N N 71 LIO C25 H251 SING N N 72 LIO C25 H252 SING N N 73 LIO C25 H253 SING N N 74 LIO C31 C32 SING N N 75 LIO C31 O2 SING N N 76 LIO C31 O31 DOUB N N 77 LIO C32 C33 SING N N 78 LIO C32 H321 SING N N 79 LIO C32 H322 SING N N 80 LIO C33 C34 SING N N 81 LIO C33 H331 SING N N 82 LIO C33 H332 SING N N 83 LIO C34 C35 SING N N 84 LIO C34 H341 SING N N 85 LIO C34 H342 SING N N 86 LIO C35 C36 SING N N 87 LIO C35 H351 SING N N 88 LIO C35 H352 SING N N 89 LIO C36 C37 SING N N 90 LIO C36 H361 SING N N 91 LIO C36 H362 SING N N 92 LIO C37 C38 SING N N 93 LIO C37 H371 SING N N 94 LIO C37 H372 SING N N 95 LIO C38 C39 SING N N 96 LIO C38 H381 SING N N 97 LIO C38 H382 SING N N 98 LIO C39 C40 SING N N 99 LIO C39 H391 SING N N 100 LIO C39 H392 SING N N 101 LIO C40 H401 SING N N 102 LIO C40 H402 SING N N 103 LIO C40 H403 SING N N 104 LIO O1P P SING N N 105 LIO O1P HOP1 SING N N 106 LIO O2P P DOUB N N 107 LIO O3P P SING N N 108 LIO O4P P SING N N 109 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LIO SMILES ACDLabs 10.04 "O=C(OC(COP(=O)(OCC[N+](C)(C)C)O)COC(=O)CCCCCCCCCCCCCC)CCCCCCCCC" LIO SMILES_CANONICAL CACTVS 3.341 "CCCCCCCCCCCCCCC(=O)OC[C@H](CO[P@@](O)(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCC" LIO SMILES CACTVS 3.341 "CCCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCC" LIO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCCCCC(=O)OC[C@H](CO[P@](=O)(O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCC" LIO SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCC" LIO InChI InChI 1.03 "InChI=1S/C33H66NO8P/c1-6-8-10-12-14-15-16-17-18-20-21-23-25-32(35)39-29-31(30-41-43(37,38)40-28-27-34(3,4)5)42-33(36)26-24-22-19-13-11-9-7-2/h31H,6-30H2,1-5H3/p+1/t31-/m1/s1" LIO InChIKey InChI 1.03 YAOVLDDMIGILIT-WJOKGBTCSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LIO "SYSTEMATIC NAME" ACDLabs 10.04 "(4R,7R)-7-(decanoyloxy)-4-hydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphatetracosan-1-aminium 4-oxide" LIO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[[(2R)-2-decanoyloxy-3-pentadecanoyloxy-propoxy]-hydroxy-phosphoryl]oxyethyl-trimethyl-azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LIO "Create component" 1999-12-15 RCSB LIO "Modify descriptor" 2011-06-04 RCSB #