data_LIZ # _chem_comp.id LIZ _chem_comp.name "N-{(1S,2S)-2-[bis(carboxymethyl)amino]cyclohexyl}-N-{(2R)-2-[bis(carboxymethyl)amino]-3-[4-({[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]carbamothioyl}amino)phenyl]propyl}glycine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H45 N5 O13 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-07-27 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 715.769 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LIZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3DSZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LIZ N1 N1 N 0 1 N N N 30.763 76.311 44.832 1.218 1.545 -0.877 N1 LIZ 1 LIZ N3 N3 N 0 1 N N N 28.656 80.439 45.903 5.137 -1.342 -0.186 N3 LIZ 2 LIZ C4 C4 C 0 1 N N N 30.012 75.425 45.736 1.376 0.358 -1.728 C4 LIZ 3 LIZ C5 C5 C 0 1 N N N 32.530 79.437 43.995 3.233 -0.514 3.262 C5 LIZ 4 LIZ C6 C6 C 0 1 N N N 32.213 79.865 45.429 4.114 0.246 2.304 C6 LIZ 5 LIZ C7 C7 C 0 1 N N N 26.583 79.150 45.556 6.633 -2.495 -1.714 C7 LIZ 6 LIZ C8 C8 C 0 1 N N N 27.450 79.910 46.560 6.321 -2.207 -0.268 C8 LIZ 7 LIZ C10 C10 C 0 1 N N N 28.306 81.623 45.107 4.230 -1.791 0.879 C10 LIZ 8 LIZ C13 C13 C 0 1 N N S 30.614 79.672 47.247 4.272 0.943 -0.009 C13 LIZ 9 LIZ C15 C15 C 0 1 N N N 31.719 80.170 48.184 4.674 2.405 0.193 C15 LIZ 10 LIZ C17 C17 C 0 1 N N N 30.197 82.000 49.024 6.868 1.955 -0.914 C17 LIZ 11 LIZ C20 C20 C 0 1 Y N N 35.140 76.420 45.391 -1.977 0.208 0.998 C20 LIZ 12 LIZ C21 C21 C 0 1 Y N N 36.450 76.718 45.744 -3.141 -0.277 0.436 C21 LIZ 13 LIZ C22 C22 C 0 1 Y N N 36.876 76.601 47.063 -3.740 0.405 -0.616 C22 LIZ 14 LIZ C24 C24 C 0 1 Y N N 34.665 75.867 47.685 -2.001 2.054 -0.531 C24 LIZ 15 LIZ C26 C26 C 0 1 N N N 39.049 77.296 46.568 -6.043 -0.168 -0.449 C26 LIZ 16 LIZ C28 C28 C 0 1 N N N 41.289 78.011 46.030 -8.407 -0.703 -0.208 C28 LIZ 17 LIZ O7 O7 O 0 1 N N N 27.060 78.955 44.417 5.873 -2.131 -2.580 O7 LIZ 18 LIZ O8 O8 O 0 1 N N N 25.464 78.746 45.943 7.756 -3.155 -2.040 O8 LIZ 19 LIZ C9 C9 C 0 1 N N N 29.407 81.889 44.081 3.807 -3.213 0.613 C9 LIZ 20 LIZ O10 O10 O 0 1 N N N 29.629 83.080 43.772 2.896 -3.801 1.403 O10 LIZ 21 LIZ O9 O9 O 0 1 N N N 29.997 80.892 43.615 4.290 -3.823 -0.312 O9 LIZ 22 LIZ C14 C14 C 0 1 N N S 29.710 80.835 46.849 5.523 0.062 0.009 C14 LIZ 23 LIZ C18 C18 C 0 1 N N N 29.099 81.488 48.091 6.466 0.492 -1.117 C18 LIZ 24 LIZ C16 C16 C 0 1 N N N 31.137 80.858 49.419 5.617 2.835 -0.932 C16 LIZ 25 LIZ N2 N2 N 0 1 N N N 31.204 79.008 46.071 3.367 0.530 1.071 N2 LIZ 26 LIZ O6 O6 O 0 1 N N N 33.573 79.895 43.479 3.671 -0.794 4.499 O6 LIZ 27 LIZ O5 O5 O 0 1 N N N 31.724 78.673 43.422 2.131 -0.871 2.916 O5 LIZ 28 LIZ C12 C12 C 0 1 N N N 31.824 77.761 46.546 2.329 1.543 1.305 C12 LIZ 29 LIZ C11 C11 C 0 1 N N R 32.043 76.752 45.418 1.064 1.164 0.534 C11 LIZ 30 LIZ C3 C3 C 0 1 N N N 28.985 76.219 46.542 0.076 -0.402 -1.776 C3 LIZ 31 LIZ O4 O4 O 0 1 N N N 28.505 75.668 47.559 0.008 -1.574 -2.427 O4 LIZ 32 LIZ O3 O3 O 0 1 N N N 28.694 77.363 46.131 -0.905 0.043 -1.230 O3 LIZ 33 LIZ C2 C2 C 0 1 N N N 30.995 75.618 43.558 2.343 2.472 -1.052 C2 LIZ 34 LIZ C1 C1 C 0 1 N N N 29.770 75.811 42.661 2.070 3.743 -0.290 C1 LIZ 35 LIZ O2 O2 O 0 1 N N N 29.712 75.130 41.615 1.021 3.886 0.292 O2 LIZ 36 LIZ O1 O1 O 0 1 N N N 28.920 76.646 43.039 2.993 4.718 -0.257 O1 LIZ 37 LIZ C25 C25 C 0 1 N N N 32.832 75.558 45.960 -0.137 1.900 1.132 C25 LIZ 38 LIZ C19 C19 C 0 1 Y N N 34.246 75.981 46.361 -1.408 1.373 0.515 C19 LIZ 39 LIZ C23 C23 C 0 1 Y N N 35.969 76.186 48.034 -3.165 1.574 -1.098 C23 LIZ 40 LIZ N4 N4 N 0 1 N N N 38.101 76.964 47.437 -4.919 -0.085 -1.188 N4 LIZ 41 LIZ S1 S1 S 0 1 N N N 38.808 77.014 44.857 -5.998 0.205 1.222 S1 LIZ 42 LIZ N5 N5 N 0 1 N N N 40.236 77.696 47.007 -7.201 -0.546 -1.024 N5 LIZ 43 LIZ C29 C29 C 0 1 N N N 40.686 78.869 44.920 -8.156 -1.753 0.877 C29 LIZ 44 LIZ O11 O11 O 0 1 N N N 39.415 79.366 45.352 -7.686 -2.959 0.272 O11 LIZ 45 LIZ C30 C30 C 0 1 N N N 41.764 76.659 45.503 -8.757 0.634 0.448 C30 LIZ 46 LIZ O12 O12 O 0 1 N N N 41.897 75.786 46.629 -9.058 1.597 -0.564 O12 LIZ 47 LIZ C27 C27 C 0 1 N N N 42.483 78.733 46.656 -9.569 -1.155 -1.095 C27 LIZ 48 LIZ O13 O13 O 0 1 N N N 43.458 78.998 45.643 -10.745 -1.309 -0.299 O13 LIZ 49 LIZ H4 H4 H 0 1 N N N 29.489 74.663 45.139 1.654 0.668 -2.735 H4 LIZ 50 LIZ H4A H4A H 0 1 N N N 30.718 74.950 46.433 2.156 -0.282 -1.317 H4A LIZ 51 LIZ H6 H6 H 0 1 N N N 33.140 79.811 46.019 4.425 1.184 2.764 H6 LIZ 52 LIZ H6A H6A H 0 1 N N N 31.805 80.886 45.389 4.993 -0.352 2.067 H6A LIZ 53 LIZ H8 H8 H 0 1 N N N 27.750 79.226 47.368 7.171 -1.705 0.194 H8 LIZ 54 LIZ H8A H8A H 0 1 N N N 26.869 80.750 46.968 6.124 -3.143 0.254 H8A LIZ 55 LIZ H10 H10 H 0 1 N N N 27.354 81.446 44.586 4.743 -1.738 1.839 H10 LIZ 56 LIZ H10A H10A H 0 0 N N N 28.204 82.494 45.770 3.350 -1.148 0.901 H10A LIZ 57 LIZ H13 H13 H 0 1 N N N 29.995 78.928 47.770 3.766 0.835 -0.969 H13 LIZ 58 LIZ H15 H15 H 0 1 N N N 32.323 79.310 48.509 3.783 3.032 0.180 H15 LIZ 59 LIZ H15A H15A H 0 0 N N N 32.334 80.900 47.638 5.181 2.513 1.152 H15A LIZ 60 LIZ H17 H17 H 0 1 N N N 30.775 82.781 48.508 7.374 2.062 0.045 H17 LIZ 61 LIZ H17A H17A H 0 0 N N N 29.732 82.410 49.932 7.540 2.261 -1.716 H17A LIZ 62 LIZ H20 H20 H 0 1 N N N 34.817 76.529 44.366 -1.513 -0.319 1.819 H20 LIZ 63 LIZ H21 H21 H 0 1 N N N 37.146 77.044 44.985 -3.585 -1.187 0.813 H21 LIZ 64 LIZ H24 H24 H 0 1 N N N 33.972 75.529 48.442 -1.554 2.963 -0.906 H24 LIZ 65 LIZ HO8 HO8 H 0 1 N N N 25.038 78.271 45.239 7.913 -3.316 -2.980 HO8 LIZ 66 LIZ HO10 HO10 H 0 0 N N N 30.321 83.115 43.122 2.657 -4.714 1.193 HO10 LIZ 67 LIZ H14 H14 H 0 1 N N N 30.344 81.568 46.329 6.029 0.170 0.968 H14 LIZ 68 LIZ H18 H18 H 0 1 N N N 28.490 80.745 48.626 5.959 0.384 -2.076 H18 LIZ 69 LIZ H18A H18A H 0 0 N N N 28.475 82.338 47.776 7.357 -0.135 -1.104 H18A LIZ 70 LIZ H16 H16 H 0 1 N N N 30.573 80.119 50.006 5.111 2.727 -1.892 H16 LIZ 71 LIZ H16A H16A H 0 0 N N N 31.966 81.276 50.010 5.904 3.877 -0.788 H16A LIZ 72 LIZ HO6 HO6 H 0 1 N N N 33.655 79.572 42.589 3.070 -1.284 5.077 HO6 LIZ 73 LIZ H12 H12 H 0 1 N N N 32.800 78.004 46.991 2.104 1.593 2.371 H12 LIZ 74 LIZ H12A H12A H 0 0 N N N 31.143 77.304 47.279 2.687 2.514 0.963 H12A LIZ 75 LIZ H11 H11 H 0 1 N N N 32.616 77.237 44.614 0.903 0.089 0.604 H11 LIZ 76 LIZ HO4 HO4 H 0 1 N N N 27.883 76.254 47.973 -0.826 -2.061 -2.369 HO4 LIZ 77 LIZ H2 H2 H 0 1 N N N 31.885 76.036 43.065 3.256 2.011 -0.674 H2 LIZ 78 LIZ H2A H2A H 0 1 N N N 31.159 74.546 43.741 2.464 2.702 -2.111 H2A LIZ 79 LIZ HO1 HO1 H 0 1 N N N 28.213 76.688 42.406 2.745 5.543 0.181 HO1 LIZ 80 LIZ H25 H25 H 0 1 N N N 32.313 75.156 46.843 -0.162 1.739 2.210 H25 LIZ 81 LIZ H25A H25A H 0 0 N N N 32.901 74.793 45.173 -0.049 2.967 0.926 H25A LIZ 82 LIZ H23 H23 H 0 1 N N N 36.282 76.112 49.065 -3.628 2.106 -1.916 H23 LIZ 83 LIZ HN4 HN4 H 0 1 N N N 38.316 76.988 48.413 -4.927 -0.364 -2.117 HN4 LIZ 84 LIZ HN5 HN5 H 0 1 N N N 40.412 77.782 47.988 -7.237 -0.713 -1.979 HN5 LIZ 85 LIZ H29 H29 H 0 1 N N N 41.357 79.713 44.700 -7.406 -1.381 1.576 H29 LIZ 86 LIZ H29A H29A H 0 0 N N N 40.558 78.263 44.011 -9.084 -1.952 1.412 H29A LIZ 87 LIZ HO11 HO11 H 0 0 N N N 39.422 79.476 46.296 -7.505 -3.670 0.902 HO11 LIZ 88 LIZ H30 H30 H 0 1 N N N 41.032 76.251 44.790 -9.625 0.505 1.096 H30 LIZ 89 LIZ H30A H30A H 0 0 N N N 42.724 76.763 44.977 -7.911 0.981 1.040 H30A LIZ 90 LIZ HO12 HO12 H 0 0 N N N 41.926 74.885 46.330 -9.289 2.470 -0.220 HO12 LIZ 91 LIZ H27 H27 H 0 1 N N N 42.148 79.681 47.101 -9.748 -0.408 -1.868 H27 LIZ 92 LIZ H27A H27A H 0 0 N N N 42.927 78.101 47.439 -9.319 -2.108 -1.563 H27A LIZ 93 LIZ HO13 HO13 H 0 0 N N N 43.029 79.057 44.797 -11.523 -1.595 -0.798 HO13 LIZ 94 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LIZ N1 C4 SING N N 1 LIZ N1 C11 SING N N 2 LIZ N1 C2 SING N N 3 LIZ N3 C8 SING N N 4 LIZ N3 C10 SING N N 5 LIZ N3 C14 SING N N 6 LIZ C4 C3 SING N N 7 LIZ C5 C6 SING N N 8 LIZ C5 O6 SING N N 9 LIZ C5 O5 DOUB N N 10 LIZ C6 N2 SING N N 11 LIZ C7 C8 SING N N 12 LIZ C7 O7 DOUB N N 13 LIZ C7 O8 SING N N 14 LIZ C10 C9 SING N N 15 LIZ C13 C15 SING N N 16 LIZ C13 C14 SING N N 17 LIZ C13 N2 SING N N 18 LIZ C15 C16 SING N N 19 LIZ C17 C18 SING N N 20 LIZ C17 C16 SING N N 21 LIZ C20 C21 DOUB Y N 22 LIZ C20 C19 SING Y N 23 LIZ C21 C22 SING Y N 24 LIZ C22 C23 DOUB Y N 25 LIZ C22 N4 SING N N 26 LIZ C24 C19 DOUB Y N 27 LIZ C24 C23 SING Y N 28 LIZ C26 N4 SING N N 29 LIZ C26 S1 DOUB N N 30 LIZ C26 N5 SING N N 31 LIZ C28 N5 SING N N 32 LIZ C28 C29 SING N N 33 LIZ C28 C30 SING N N 34 LIZ C28 C27 SING N N 35 LIZ C9 O10 SING N N 36 LIZ C9 O9 DOUB N N 37 LIZ C14 C18 SING N N 38 LIZ N2 C12 SING N N 39 LIZ C12 C11 SING N N 40 LIZ C11 C25 SING N N 41 LIZ C3 O4 SING N N 42 LIZ C3 O3 DOUB N N 43 LIZ C2 C1 SING N N 44 LIZ C1 O2 DOUB N N 45 LIZ C1 O1 SING N N 46 LIZ C25 C19 SING N N 47 LIZ C29 O11 SING N N 48 LIZ C30 O12 SING N N 49 LIZ C27 O13 SING N N 50 LIZ C4 H4 SING N N 51 LIZ C4 H4A SING N N 52 LIZ C6 H6 SING N N 53 LIZ C6 H6A SING N N 54 LIZ C8 H8 SING N N 55 LIZ C8 H8A SING N N 56 LIZ C10 H10 SING N N 57 LIZ C10 H10A SING N N 58 LIZ C13 H13 SING N N 59 LIZ C15 H15 SING N N 60 LIZ C15 H15A SING N N 61 LIZ C17 H17 SING N N 62 LIZ C17 H17A SING N N 63 LIZ C20 H20 SING N N 64 LIZ C21 H21 SING N N 65 LIZ C24 H24 SING N N 66 LIZ O8 HO8 SING N N 67 LIZ O10 HO10 SING N N 68 LIZ C14 H14 SING N N 69 LIZ C18 H18 SING N N 70 LIZ C18 H18A SING N N 71 LIZ C16 H16 SING N N 72 LIZ C16 H16A SING N N 73 LIZ O6 HO6 SING N N 74 LIZ C12 H12 SING N N 75 LIZ C12 H12A SING N N 76 LIZ C11 H11 SING N N 77 LIZ O4 HO4 SING N N 78 LIZ C2 H2 SING N N 79 LIZ C2 H2A SING N N 80 LIZ O1 HO1 SING N N 81 LIZ C25 H25 SING N N 82 LIZ C25 H25A SING N N 83 LIZ C23 H23 SING N N 84 LIZ N4 HN4 SING N N 85 LIZ N5 HN5 SING N N 86 LIZ C29 H29 SING N N 87 LIZ C29 H29A SING N N 88 LIZ O11 HO11 SING N N 89 LIZ C30 H30 SING N N 90 LIZ C30 H30A SING N N 91 LIZ O12 HO12 SING N N 92 LIZ C27 H27 SING N N 93 LIZ C27 H27A SING N N 94 LIZ O13 HO13 SING N N 95 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LIZ SMILES ACDLabs 10.04 "S=C(NC(CO)(CO)CO)Nc1ccc(cc1)CC(N(CC(=O)O)CC(=O)O)CN(CC(=O)O)C2CCCCC2N(CC(=O)O)CC(=O)O" LIZ SMILES_CANONICAL CACTVS 3.341 "OCC(CO)(CO)NC(=S)Nc1ccc(C[C@H](CN(CC(O)=O)[C@H]2CCCC[C@@H]2N(CC(O)=O)CC(O)=O)N(CC(O)=O)CC(O)=O)cc1" LIZ SMILES CACTVS 3.341 "OCC(CO)(CO)NC(=S)Nc1ccc(C[CH](CN(CC(O)=O)[CH]2CCCC[CH]2N(CC(O)=O)CC(O)=O)N(CC(O)=O)CC(O)=O)cc1" LIZ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1C[C@H](C[N@](CC(=O)O)[C@H]2CCCC[C@@H]2N(CC(=O)O)CC(=O)O)N(CC(=O)O)CC(=O)O)NC(=S)NC(CO)(CO)CO" LIZ SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(ccc1CC(CN(CC(=O)O)C2CCCCC2N(CC(=O)O)CC(=O)O)N(CC(=O)O)CC(=O)O)NC(=S)NC(CO)(CO)CO" LIZ InChI InChI 1.03 ;InChI=1S/C30H45N5O13S/c36-16-30(17-37,18-38)32-29(49)31-20-7-5-19(6-8-20)9-21(33(11-24(39)40)12-25(41)42)10-34(13-26(43)44)22-3-1-2-4-23(22)35(14-27(45)46)15-28(47)48/h5-8,21-23,36-38H,1-4,9-18H2,(H,39,40)(H,41,42)(H,43,44)(H,45,46)(H,47,48)(H2,31,32,49)/t21-,22+,23+/m1/s1 ; LIZ InChIKey InChI 1.03 ZDJITWBUQUCYMP-VJBWXMMDSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LIZ "SYSTEMATIC NAME" ACDLabs 10.04 "N-{(1S,2S)-2-[bis(carboxymethyl)amino]cyclohexyl}-N-{(2R)-2-[bis(carboxymethyl)amino]-3-[4-({[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]carbamothioyl}amino)phenyl]propyl}glycine" LIZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[[(2R)-1-[[(1S,2S)-2-(bis(carboxymethyl)amino)cyclohexyl]-(carboxymethyl)amino]-3-[4-[[1,3-dihydroxy-2-(hydroxymethyl)propan-2-yl]carbamothioylamino]phenyl]propan-2-yl]-(carboxymethyl)amino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LIZ "Create component" 2008-07-27 PDBJ LIZ "Modify aromatic_flag" 2011-06-04 RCSB LIZ "Modify descriptor" 2011-06-04 RCSB #