data_LJO # _chem_comp.id LJO _chem_comp.name "(3R)-3-cyano-N-(4-methylpyridin-3-yl)oxolane-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H13 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-15 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 231.251 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LJO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GCI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LJO N1 N1 N 0 1 N N N N N N 8.049 0.142 21.490 -0.434 0.450 -0.225 N1 LJO 1 LJO C4 C1 C 0 1 Y N N N N N 7.740 0.129 19.034 -2.039 -1.338 0.062 C4 LJO 2 LJO C5 C2 C 0 1 Y N N N N N 7.252 0.312 20.333 -1.758 0.006 -0.142 C5 LJO 3 LJO C6 C3 C 0 1 N N N N N N 9.383 0.122 21.591 0.552 -0.257 0.363 C6 LJO 4 LJO C7 C4 C 0 1 N N R N N N 9.999 -0.709 22.734 1.990 0.149 0.167 C7 LJO 5 LJO C8 C5 C 0 1 N N N N N N 9.050 -1.137 23.885 2.934 -0.834 0.895 C8 LJO 6 LJO C10 C6 C 0 1 N N N N N N 10.611 -2.030 22.254 2.389 0.027 -1.320 C10 LJO 7 LJO N2 N2 N 0 1 N N N N N N 11.900 0.810 23.673 2.374 2.584 1.019 N2 LJO 8 LJO C11 C7 C 0 1 N N N N N N 11.081 0.119 23.294 2.207 1.523 0.648 C11 LJO 9 LJO O1 O1 O 0 1 N N N N N N 10.585 -2.871 23.402 3.752 -0.452 -1.298 O1 LJO 10 LJO C9 C8 C 0 1 N N N N N N 9.329 -2.622 24.035 3.793 -1.438 -0.238 C9 LJO 11 LJO O O2 O 0 1 N N N N N N 10.102 0.862 20.945 0.281 -1.219 1.049 O LJO 12 LJO C1 C9 C 0 1 Y N N N N N 5.899 0.632 20.496 -2.814 0.907 -0.263 C1 LJO 13 LJO C C10 C 0 1 N N N N N N 5.296 0.865 21.858 -2.556 2.375 -0.486 C LJO 14 LJO N N3 N 0 1 Y N N N N N 7.005 0.312 17.932 -3.286 -1.760 0.136 N LJO 15 LJO C3 C11 C 0 1 Y N N N N N 5.733 0.683 18.103 -4.307 -0.935 0.021 C3 LJO 16 LJO C2 C12 C 0 1 Y N N N N N 5.145 0.839 19.344 -4.108 0.420 -0.173 C2 LJO 17 LJO H1 H1 H 0 1 N N N N N N 7.548 0.021 22.347 -0.224 1.264 -0.709 H1 LJO 18 LJO H2 H2 H 0 1 N N N N N N 8.769 -0.177 18.915 -1.229 -2.045 0.157 H2 LJO 19 LJO H3 H3 H 0 1 N N N N N N 9.287 -0.596 24.813 3.562 -0.302 1.609 H3 LJO 20 LJO H4 H4 H 0 1 N N N N N N 7.999 -0.959 23.615 2.360 -1.614 1.396 H4 LJO 21 LJO H5 H5 H 0 1 N N N N N N 10.011 -2.464 21.440 1.744 -0.689 -1.828 H5 LJO 22 LJO H6 H6 H 0 1 N N N N N N 11.644 -1.877 21.907 2.337 1.000 -1.808 H6 LJO 23 LJO H7 H7 H 0 1 N N N N N N 8.536 -3.208 23.547 4.818 -1.588 0.102 H7 LJO 24 LJO H8 H8 H 0 1 N N N N N N 9.381 -2.892 25.100 3.363 -2.380 -0.579 H8 LJO 25 LJO H9 H9 H 0 1 N N N N N N 4.875 -0.077 22.239 -2.507 2.576 -1.556 H9 LJO 26 LJO H10 H10 H 0 1 N N N N N N 6.075 1.224 22.547 -3.363 2.957 -0.043 H10 LJO 27 LJO H11 H11 H 0 1 N N N N N N 4.498 1.619 21.782 -1.610 2.652 -0.020 H11 LJO 28 LJO H12 H12 H 0 1 N N N N N N 5.133 0.871 17.225 -5.314 -1.320 0.088 H12 LJO 29 LJO H13 H13 H 0 1 N N N N N N 4.105 1.120 19.420 -4.951 1.088 -0.266 H13 LJO 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LJO N C3 DOUB Y N 1 LJO N C4 SING Y N 2 LJO C3 C2 SING Y N 3 LJO C4 C5 DOUB Y N 4 LJO C2 C1 DOUB Y N 5 LJO C5 C1 SING Y N 6 LJO C5 N1 SING N N 7 LJO C1 C SING N N 8 LJO O C6 DOUB N N 9 LJO N1 C6 SING N N 10 LJO C6 C7 SING N N 11 LJO C10 C7 SING N N 12 LJO C10 O1 SING N N 13 LJO C7 C11 SING N N 14 LJO C7 C8 SING N N 15 LJO C11 N2 TRIP N N 16 LJO O1 C9 SING N N 17 LJO C8 C9 SING N N 18 LJO N1 H1 SING N N 19 LJO C4 H2 SING N N 20 LJO C8 H3 SING N N 21 LJO C8 H4 SING N N 22 LJO C10 H5 SING N N 23 LJO C10 H6 SING N N 24 LJO C9 H7 SING N N 25 LJO C9 H8 SING N N 26 LJO C H9 SING N N 27 LJO C H10 SING N N 28 LJO C H11 SING N N 29 LJO C3 H12 SING N N 30 LJO C2 H13 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LJO SMILES ACDLabs 12.01 "N#CC1(CCOC1)C(=O)Nc1cnccc1C" LJO InChI InChI 1.06 "InChI=1S/C12H13N3O2/c1-9-2-4-14-6-10(9)15-11(16)12(7-13)3-5-17-8-12/h2,4,6H,3,5,8H2,1H3,(H,15,16)/t12-/m1/s1" LJO InChIKey InChI 1.06 UDNOYHYGEXMWIJ-GFCCVEGCSA-N LJO SMILES_CANONICAL CACTVS 3.385 "Cc1ccncc1NC(=O)[C@]2(CCOC2)C#N" LJO SMILES CACTVS 3.385 "Cc1ccncc1NC(=O)[C]2(CCOC2)C#N" LJO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)[C@]2(CCOC2)C#N" LJO SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)C2(CCOC2)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LJO "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3-cyano-N-(4-methylpyridin-3-yl)oxolane-3-carboxamide" LJO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-3-cyano-~{N}-(4-methylpyridin-3-yl)oxolane-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LJO "Create component" 2023-08-15 RCSB LJO "Initial release" 2023-11-08 RCSB #