data_LKP # _chem_comp.id LKP _chem_comp.name "trans-4-{(1R)-2-[(5S)-6-fluoro-5H-imidazo[5,1-a]isoindol-5-yl]-1-hydroxyethyl}cyclohexan-1-ol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H21 F N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Navoximod _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-02-27 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 316.370 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LKP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6O3I _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LKP C4 C1 C 0 1 Y N N 9.774 28.441 161.650 2.284 0.512 -0.498 C4 LKP 1 LKP C14 C2 C 0 1 N N N 10.725 27.788 163.926 -0.020 0.191 -1.383 C14 LKP 2 LKP C5 C3 C 0 1 Y N N 9.980 29.683 161.033 2.762 -0.287 0.540 C5 LKP 3 LKP C6 C4 C 0 1 Y N N 8.965 30.289 160.286 3.610 0.269 1.500 C6 LKP 4 LKP C11 C5 C 0 1 Y N N 12.212 31.210 161.394 2.198 -2.900 0.909 C11 LKP 5 LKP C7 C6 C 0 1 Y N N 11.302 30.183 161.408 2.216 -1.649 0.373 C7 LKP 6 LKP C9 C7 C 0 1 Y N N 13.088 29.672 162.577 0.946 -2.954 -0.850 C9 LKP 7 LKP C12 C8 C 0 1 N N S 10.996 28.049 162.439 1.406 -0.362 -1.357 C12 LKP 8 LKP C3 C9 C 0 1 Y N N 8.526 27.864 161.484 2.644 1.842 -0.574 C3 LKP 9 LKP C1 C10 C 0 1 Y N N 7.728 29.674 160.182 3.968 1.599 1.414 C1 LKP 10 LKP C2 C11 C 0 1 Y N N 7.501 28.444 160.780 3.488 2.386 0.382 C2 LKP 11 LKP N8 N1 N 0 1 Y N N 11.881 29.174 162.178 1.417 -1.694 -0.744 N8 LKP 12 LKP N10 N2 N 0 1 Y N N 13.328 30.880 162.128 1.417 -3.666 0.139 N10 LKP 13 LKP C15 C12 C 0 1 N N R 11.708 26.863 164.629 -0.634 0.084 0.014 C15 LKP 14 LKP O17 O1 O 0 1 N N N 12.984 27.501 164.664 0.085 0.927 0.916 O17 LKP 15 LKP C18 C13 C 0 1 N N N 11.252 26.399 166.014 -2.099 0.525 -0.038 C18 LKP 16 LKP C20 C14 C 0 1 N N N 9.967 25.566 165.938 -2.869 -0.378 -1.004 C20 LKP 17 LKP C21 C15 C 0 1 N N N 9.523 24.992 167.289 -4.333 0.062 -1.055 C21 LKP 18 LKP C22 C16 C 0 1 N N N 10.636 24.201 167.944 -4.948 -0.045 0.342 C22 LKP 19 LKP C24 C17 C 0 1 N N N 11.890 25.040 168.086 -4.177 0.858 1.308 C24 LKP 20 LKP C25 C18 C 0 1 N N N 12.344 25.598 166.733 -2.713 0.418 1.359 C25 LKP 21 LKP O26 O2 O 0 1 N N N 10.211 23.724 169.228 -6.315 0.366 0.294 O26 LKP 22 LKP F27 F1 F 0 1 N N N 8.305 26.669 162.069 2.174 2.614 -1.578 F27 LKP 23 LKP H1 H1 H 0 1 N N N 10.743 28.757 164.447 0.001 1.236 -1.692 H1 LKP 24 LKP H2 H2 H 0 1 N N N 9.723 27.343 164.013 -0.620 -0.384 -2.089 H2 LKP 25 LKP H3 H3 H 0 1 N N N 9.145 31.233 159.792 3.986 -0.340 2.309 H3 LKP 26 LKP H4 H4 H 0 1 N N N 12.072 32.148 160.878 2.723 -3.218 1.798 H4 LKP 27 LKP H5 H5 H 0 1 N N N 13.778 29.124 163.202 0.287 -3.315 -1.626 H5 LKP 28 LKP H13 H6 H 0 1 N N N 11.424 27.136 161.998 1.805 -0.413 -2.370 H13 LKP 29 LKP H6 H7 H 0 1 N N N 6.934 30.156 159.631 4.624 2.028 2.157 H6 LKP 30 LKP H7 H8 H 0 1 N N N 6.542 27.955 160.694 3.773 3.426 0.321 H7 LKP 31 LKP H16 H9 H 0 1 N N N 11.797 25.961 164.006 -0.577 -0.948 0.358 H16 LKP 32 LKP H8 H10 H 0 1 N N N 13.610 26.935 165.101 0.077 1.863 0.671 H8 LKP 33 LKP H19 H11 H 0 1 N N N 11.038 27.294 166.617 -2.156 1.557 -0.382 H19 LKP 34 LKP H9 H12 H 0 1 N N N 9.161 26.206 165.551 -2.431 -0.302 -1.999 H9 LKP 35 LKP H10 H13 H 0 1 N N N 10.136 24.729 165.244 -2.812 -1.411 -0.660 H10 LKP 36 LKP H11 H14 H 0 1 N N N 9.234 25.820 167.953 -4.390 1.095 -1.400 H11 LKP 37 LKP H12 H15 H 0 1 N N N 8.659 24.330 167.130 -4.882 -0.581 -1.744 H12 LKP 38 LKP H23 H16 H 0 1 N N N 10.871 23.342 167.299 -4.890 -1.077 0.686 H23 LKP 39 LKP H14 H17 H 0 1 N N N 12.693 24.415 168.504 -4.234 1.891 0.964 H14 LKP 40 LKP H15 H18 H 0 1 N N N 11.685 25.878 168.768 -4.615 0.782 2.303 H15 LKP 41 LKP H17 H19 H 0 1 N N N 12.642 24.757 166.090 -2.656 -0.615 1.703 H17 LKP 42 LKP H18 H20 H 0 1 N N N 13.209 26.257 166.899 -2.164 1.061 2.047 H18 LKP 43 LKP H20 H21 H 0 1 N N N 10.915 23.229 169.631 -6.769 0.324 1.147 H20 LKP 44 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LKP C1 C6 DOUB Y N 1 LKP C1 C2 SING Y N 2 LKP C6 C5 SING Y N 3 LKP C2 C3 DOUB Y N 4 LKP C5 C7 SING N N 5 LKP C5 C4 DOUB Y N 6 LKP C11 C7 DOUB Y N 7 LKP C11 N10 SING Y N 8 LKP C7 N8 SING Y N 9 LKP C3 C4 SING Y N 10 LKP C3 F27 SING N N 11 LKP C4 C12 SING N N 12 LKP N10 C9 DOUB Y N 13 LKP N8 C12 SING N N 14 LKP N8 C9 SING Y N 15 LKP C12 C14 SING N N 16 LKP C14 C15 SING N N 17 LKP C15 O17 SING N N 18 LKP C15 C18 SING N N 19 LKP C20 C18 SING N N 20 LKP C20 C21 SING N N 21 LKP C18 C25 SING N N 22 LKP C25 C24 SING N N 23 LKP C21 C22 SING N N 24 LKP C22 C24 SING N N 25 LKP C22 O26 SING N N 26 LKP C14 H1 SING N N 27 LKP C14 H2 SING N N 28 LKP C6 H3 SING N N 29 LKP C11 H4 SING N N 30 LKP C9 H5 SING N N 31 LKP C12 H13 SING N N 32 LKP C1 H6 SING N N 33 LKP C2 H7 SING N N 34 LKP C15 H16 SING N N 35 LKP O17 H8 SING N N 36 LKP C18 H19 SING N N 37 LKP C20 H9 SING N N 38 LKP C20 H10 SING N N 39 LKP C21 H11 SING N N 40 LKP C21 H12 SING N N 41 LKP C22 H23 SING N N 42 LKP C24 H14 SING N N 43 LKP C24 H15 SING N N 44 LKP C25 H17 SING N N 45 LKP C25 H18 SING N N 46 LKP O26 H20 SING N N 47 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LKP SMILES ACDLabs 12.01 "c23C(CC(O)C1CCC(CC1)O)n4c(c2cccc3F)cnc4" LKP InChI InChI 1.03 "InChI=1S/C18H21FN2O2/c19-14-3-1-2-13-16-9-20-10-21(16)15(18(13)14)8-17(23)11-4-6-12(22)7-5-11/h1-3,9-12,15,17,22-23H,4-8H2/t11-,12-,15-,17+/m0/s1" LKP InChIKey InChI 1.03 YGACXVRLDHEXKY-WXRXAMBDSA-N LKP SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CC[C@@H](CC1)[C@H](O)C[C@@H]2n3cncc3c4cccc(F)c24" LKP SMILES CACTVS 3.385 "O[CH]1CC[CH](CC1)[CH](O)C[CH]2n3cncc3c4cccc(F)c24" LKP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc-2c(c(c1)F)[C@@H](n3c2cnc3)C[C@H](C4CCC(CC4)O)O" LKP SMILES "OpenEye OEToolkits" 2.0.7 "c1cc-2c(c(c1)F)C(n3c2cnc3)CC(C4CCC(CC4)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LKP "SYSTEMATIC NAME" ACDLabs 12.01 "trans-4-{(1R)-2-[(5S)-6-fluoro-5H-imidazo[5,1-a]isoindol-5-yl]-1-hydroxyethyl}cyclohexan-1-ol" LKP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[(1~{R})-2-[(5~{S})-6-fluoranyl-5~{H}-imidazo[1,5-b]isoindol-5-yl]-1-oxidanyl-ethyl]cyclohexan-1-ol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LKP "Create component" 2019-02-27 RCSB LKP "Modify synonyms" 2019-02-27 RCSB LKP "Initial release" 2019-07-17 RCSB LKP "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id LKP _pdbx_chem_comp_synonyms.name Navoximod _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##