data_LML # _chem_comp.id LML _chem_comp.name "ISOBUTYL MALONIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H12 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 160.168 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LML _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1BFW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LML C1 C1 C 0 1 N N N N N N -3.518 3.119 2.467 -0.967 -0.060 -1.598 C1 LML 1 LML O1 O1 O 0 1 N N N N N N -4.813 3.174 2.371 -1.980 0.592 -1.509 O1 LML 2 LML OXT OXT O 0 1 N N N N N N -2.922 3.617 3.509 -0.567 -0.518 -2.794 OXT LML 3 LML CA CA C 0 1 N N N N N N -2.711 2.484 1.374 -0.154 -0.360 -0.365 CA LML 4 LML CB CB C 0 1 N N N N N N -1.468 3.192 0.831 -0.825 0.273 0.854 CB LML 5 LML CG CG C 0 1 N N N N N N -1.596 4.701 0.615 0.001 -0.031 2.106 CG LML 6 LML CD1 CD1 C 0 1 N N N N N N -1.012 5.476 1.798 -0.669 0.601 3.326 CD1 LML 7 LML CD2 CD2 C 0 1 N N N N N N -0.963 5.121 -0.714 0.090 -1.546 2.302 CD2 LML 8 LML C C C 0 1 N N N Y N Y -2.421 1.108 1.977 1.232 0.208 -0.528 C LML 9 LML O O O 0 1 N N N Y N Y -2.437 0.944 3.196 1.641 1.035 0.251 O LML 10 LML O2 O2 O 0 1 N Y N Y N Y -2.163 0.154 1.095 2.012 -0.203 -1.540 O2 LML 11 LML HXT HXT H 0 1 N N N N N N -1.975 3.576 3.579 -1.089 -0.326 -3.585 HXT LML 12 LML HA HA H 0 1 N N N N N N -3.400 2.357 0.539 -0.090 -1.439 -0.226 HA LML 13 LML HB1 1HB H 0 1 N N N N N N -1.198 2.732 -0.119 -1.827 -0.138 0.972 HB1 LML 14 LML HB2 2HB H 0 1 N N N N N N -0.642 3.012 1.519 -0.888 1.352 0.715 HB2 LML 15 LML HG HG H 0 1 N N N N N N -2.656 4.949 0.559 1.003 0.379 1.988 HG LML 16 LML HD11 1HD1 H 0 0 N N N N N N -0.480 4.789 2.456 -0.081 0.384 4.218 HD11 LML 17 LML HD12 2HD1 H 0 0 N N N N N N -0.321 6.234 1.429 -0.733 1.680 3.187 HD12 LML 18 LML HD13 3HD1 H 0 0 N N N N N N -1.819 5.959 2.350 -1.672 0.190 3.444 HD13 LML 19 LML HD21 1HD2 H 0 0 N N N N N N -1.745 5.265 -1.459 -0.911 -1.957 2.419 HD21 LML 20 LML HD22 2HD2 H 0 0 N N N N N N -0.415 6.052 -0.576 0.568 -1.997 1.432 HD22 LML 21 LML HD23 3HD2 H 0 0 N N N N N N -0.279 4.342 -1.052 0.679 -1.763 3.193 HD23 LML 22 LML HO2 HO2 H 0 1 N Y N Y N Y -1.982 -0.700 1.469 2.901 0.161 -1.644 HO2 LML 23 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LML C1 O1 DOUB N N 1 LML C1 OXT SING N N 2 LML C1 CA SING N N 3 LML OXT HXT SING N N 4 LML CA CB SING N N 5 LML CA C SING N N 6 LML CA HA SING N N 7 LML CB CG SING N N 8 LML CB HB1 SING N N 9 LML CB HB2 SING N N 10 LML CG CD1 SING N N 11 LML CG CD2 SING N N 12 LML CG HG SING N N 13 LML CD1 HD11 SING N N 14 LML CD1 HD12 SING N N 15 LML CD1 HD13 SING N N 16 LML CD2 HD21 SING N N 17 LML CD2 HD22 SING N N 18 LML CD2 HD23 SING N N 19 LML C O DOUB N N 20 LML C O2 SING N N 21 LML O2 HO2 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LML SMILES ACDLabs 10.04 "O=C(O)C(C(=O)O)CC(C)C" LML SMILES_CANONICAL CACTVS 3.341 "CC(C)CC(C(O)=O)C(O)=O" LML SMILES CACTVS 3.341 "CC(C)CC(C(O)=O)C(O)=O" LML SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)CC(C(=O)O)C(=O)O" LML SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)CC(C(=O)O)C(=O)O" LML InChI InChI 1.03 "InChI=1S/C7H12O4/c1-4(2)3-5(6(8)9)7(10)11/h4-5H,3H2,1-2H3,(H,8,9)(H,10,11)" LML InChIKey InChI 1.03 FTKIARCSSZWRFJ-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LML "SYSTEMATIC NAME" ACDLabs 10.04 "(2-methylpropyl)propanedioic acid" LML "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-(2-methylpropyl)propanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LML "Create component" 1999-07-08 RCSB LML "Modify descriptor" 2011-06-04 RCSB LML "Modify backbone" 2023-11-03 PDBE #