data_LPB # _chem_comp.id LPB _chem_comp.name "5-[(3S)-1,2-dithiolan-3-yl]pentanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H14 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-09-08 _chem_comp.pdbx_modified_date 2011-09-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 206.326 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LPB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1HPC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LPB O1 O1 O 0 1 N N N 23.007 -8.115 9.812 4.654 0.943 -0.780 O1 LPB 1 LPB O2 O2 O 0 1 N N N 21.485 -9.563 8.998 5.703 -0.801 0.082 O2 LPB 2 LPB C1 C1 C 0 1 N N N 22.673 -9.251 9.569 4.592 -0.083 -0.144 C1 LPB 3 LPB C2 C2 C 0 1 N N N 23.538 -10.439 9.884 3.267 -0.555 0.397 C2 LPB 4 LPB C3 C3 C 0 1 N N N 23.813 -10.759 11.372 2.172 0.438 0.001 C3 LPB 5 LPB C4 C4 C 0 1 N N N 25.273 -11.223 11.550 0.826 -0.041 0.550 C4 LPB 6 LPB C5 C5 C 0 1 N N N 25.352 -12.743 11.325 -0.269 0.951 0.155 C5 LPB 7 LPB C6 C6 C 0 1 N N S 26.040 -13.195 10.002 -1.614 0.472 0.704 C6 LPB 8 LPB C7 C7 C 0 1 N N N 26.967 -14.432 10.070 -2.682 1.519 0.418 C7 LPB 9 LPB C8 C8 C 0 1 N N N 26.447 -15.539 9.169 -3.851 1.134 -0.491 C8 LPB 10 LPB S8 S8 S 0 1 N N N 24.668 -15.396 9.010 -4.109 -0.674 -0.243 S8 LPB 11 LPB S6 S6 S 0 1 N N N 24.887 -13.394 8.574 -2.080 -1.107 -0.109 S6 LPB 12 LPB HO2 HO2 H 0 1 N N N 20.993 -8.767 8.834 6.530 -0.458 -0.285 HO2 LPB 13 LPB H21 H21 H 0 1 N N N 23.035 -11.320 9.458 3.034 -1.536 -0.017 H21 LPB 14 LPB H22 H22 H 0 1 N N N 24.515 -10.254 9.414 3.321 -0.622 1.484 H22 LPB 15 LPB H31 H31 H 0 1 N N N 23.642 -9.855 11.976 2.404 1.419 0.415 H31 LPB 16 LPB H32 H32 H 0 1 N N N 23.134 -11.559 11.703 2.118 0.505 -1.085 H32 LPB 17 LPB H41 H41 H 0 1 N N N 25.915 -10.709 10.819 0.594 -1.023 0.137 H41 LPB 18 LPB H42 H42 H 0 1 N N N 25.614 -10.983 12.568 0.881 -0.109 1.637 H42 LPB 19 LPB H51 H51 H 0 1 N N N 25.928 -13.170 12.159 -0.036 1.933 0.569 H51 LPB 20 LPB H52 H52 H 0 1 N N N 24.322 -13.128 11.309 -0.323 1.019 -0.932 H52 LPB 21 LPB H6 H6 H 0 1 N N N 26.696 -12.328 9.834 -1.534 0.317 1.780 H6 LPB 22 LPB H71 H71 H 0 1 N N N 27.976 -14.144 9.741 -3.097 1.837 1.374 H71 LPB 23 LPB H72 H72 H 0 1 N N N 27.003 -14.798 11.107 -2.188 2.383 -0.026 H72 LPB 24 LPB H81 H81 H 0 1 N N N 26.912 -15.452 8.176 -4.747 1.684 -0.204 H81 LPB 25 LPB H82 H82 H 0 1 N N N 26.698 -16.516 9.607 -3.601 1.338 -1.532 H82 LPB 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LPB O1 C1 DOUB N N 1 LPB O2 C1 SING N N 2 LPB O2 HO2 SING N N 3 LPB C1 C2 SING N N 4 LPB C2 C3 SING N N 5 LPB C2 H21 SING N N 6 LPB C2 H22 SING N N 7 LPB C3 C4 SING N N 8 LPB C3 H31 SING N N 9 LPB C3 H32 SING N N 10 LPB C4 C5 SING N N 11 LPB C4 H41 SING N N 12 LPB C4 H42 SING N N 13 LPB C5 C6 SING N N 14 LPB C5 H51 SING N N 15 LPB C5 H52 SING N N 16 LPB C6 C7 SING N N 17 LPB C6 S6 SING N N 18 LPB C6 H6 SING N N 19 LPB C7 C8 SING N N 20 LPB C7 H71 SING N N 21 LPB C7 H72 SING N N 22 LPB C8 S8 SING N N 23 LPB C8 H81 SING N N 24 LPB C8 H82 SING N N 25 LPB S8 S6 SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LPB SMILES ACDLabs 12.01 "O=C(O)CCCCC1SSCC1" LPB InChI InChI 1.03 "InChI=1S/C8H14O2S2/c9-8(10)4-2-1-3-7-5-6-11-12-7/h7H,1-6H2,(H,9,10)/t7-/m0/s1" LPB InChIKey InChI 1.03 AGBQKNBQESQNJD-ZETCQYMHSA-N LPB SMILES_CANONICAL CACTVS 3.370 "OC(=O)CCCC[C@H]1CCSS1" LPB SMILES CACTVS 3.370 "OC(=O)CCCC[CH]1CCSS1" LPB SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "C1CSS[C@H]1CCCCC(=O)O" LPB SMILES "OpenEye OEToolkits" 1.7.2 "C1CSSC1CCCCC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LPB "SYSTEMATIC NAME" ACDLabs 12.01 "5-[(3S)-1,2-dithiolan-3-yl]pentanoic acid" LPB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "5-[(3S)-1,2-dithiolan-3-yl]pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LPB "Create component" 2011-09-08 RCSB #