data_LPD # _chem_comp.id LPD _chem_comp.name L-PROLINAMIDE _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C5 H10 N2 O" _chem_comp.mon_nstd_parent_comp_id PRO _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2006-08-24 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 114.146 _chem_comp.one_letter_code P _chem_comp.three_letter_code LPD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2H9E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LPD O O O 0 1 N N N 46.654 -9.264 64.795 1.223 -0.232 -0.052 O LPD 1 LPD C C C 0 1 N N N 46.597 -8.529 63.794 0.429 -0.215 -0.989 C LPD 2 LPD N2 N2 N 0 1 N N N 47.175 -8.851 62.656 -0.206 0.918 -1.442 N2 LPD 3 LPD CA CA C 0 1 N N S 45.766 -7.243 63.788 0.050 -1.458 -1.734 CA LPD 4 LPD N N N 0 1 N N N 44.569 -7.513 64.571 0.765 -2.586 -1.138 N LPD 5 LPD CD CD C 0 1 N N N 44.711 -6.944 65.900 -0.105 -3.129 -0.100 CD LPD 6 LPD CG CG C 0 1 N N N 45.964 -6.064 65.887 -1.477 -3.051 -0.736 CG LPD 7 LPD CB CB C 0 1 N N N 46.465 -6.063 64.462 -1.432 -1.782 -1.579 CB LPD 8 LPD HN21 1HN2 H 0 0 N N N 47.040 -8.159 61.947 -0.006 1.802 -0.987 HN21 LPD 9 LPD HN22 2HN2 H 0 0 N N N 47.693 -9.695 62.516 -0.867 0.904 -2.212 HN22 LPD 10 LPD HA HA H 0 1 N N N 45.576 -6.973 62.739 0.331 -1.321 -2.782 HA LPD 11 LPD H HN H 0 1 N N N 43.777 -7.103 64.118 1.673 -2.317 -0.765 H LPD 12 LPD HD3 1HD H 0 1 N N N 43.826 -6.341 66.152 -0.057 -2.514 0.806 HD3 LPD 13 LPD HD2 2HD H 0 1 N N N 44.802 -7.739 66.655 0.170 -4.155 0.161 HD2 LPD 14 LPD HG3 1HG H 0 1 N N N 45.721 -5.041 66.212 -2.280 -3.024 0.007 HG3 LPD 15 LPD HG2 2HG H 0 1 N N N 46.728 -6.448 66.578 -1.647 -3.919 -1.385 HG2 LPD 16 LPD HB2 1HB H 0 1 N N N 47.558 -6.184 64.430 -1.907 -1.964 -2.549 HB2 LPD 17 LPD HB3 2HB H 0 1 N N N 46.245 -5.113 63.953 -1.981 -0.974 -1.082 HB3 LPD 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LPD O C DOUB N N 1 LPD C N2 SING N N 2 LPD C CA SING N N 3 LPD N2 HN21 SING N N 4 LPD N2 HN22 SING N N 5 LPD CA N SING N N 6 LPD CA CB SING N N 7 LPD CA HA SING N N 8 LPD N CD SING N N 9 LPD N H SING N N 10 LPD CD CG SING N N 11 LPD CD HD3 SING N N 12 LPD CD HD2 SING N N 13 LPD CG CB SING N N 14 LPD CG HG3 SING N N 15 LPD CG HG2 SING N N 16 LPD CB HB2 SING N N 17 LPD CB HB3 SING N N 18 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LPD SMILES ACDLabs 10.04 "O=C(N)C1NCCC1" LPD SMILES_CANONICAL CACTVS 3.341 "NC(=O)[C@@H]1CCCN1" LPD SMILES CACTVS 3.341 "NC(=O)[CH]1CCCN1" LPD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1C[C@H](NC1)C(=O)N" LPD SMILES "OpenEye OEToolkits" 1.5.0 "C1CC(NC1)C(=O)N" LPD InChI InChI 1.03 "InChI=1S/C5H10N2O/c6-5(8)4-2-1-3-7-4/h4,7H,1-3H2,(H2,6,8)/t4-/m0/s1" LPD InChIKey InChI 1.03 VLJNHYLEOZPXFW-BYPYZUCNSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LPD "SYSTEMATIC NAME" ACDLabs 10.04 L-prolinamide LPD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-pyrrolidine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LPD "Create component" 2006-08-24 RCSB LPD "Modify descriptor" 2011-06-04 RCSB #