data_LQ5 # _chem_comp.id LQ5 _chem_comp.name "1-[4-(2-azanylpyrimidin-4-yl)oxyphenyl]-3-[4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H26 F3 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-04-27 _chem_comp.pdbx_modified_date 2015-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 501.504 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LQ5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5A14 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LQ5 C02 C02 C 0 1 Y N N 28.372 26.224 38.070 4.329 -0.151 0.958 C02 LQ5 1 LQ5 C03 C03 C 0 1 Y N N 27.153 26.747 38.523 3.168 0.505 0.598 C03 LQ5 2 LQ5 C04 C04 C 0 1 Y N N 27.003 27.122 39.869 3.190 1.872 0.356 C04 LQ5 3 LQ5 C06 C06 C 0 1 Y N N 29.319 26.459 40.305 5.540 1.922 0.836 C06 LQ5 4 LQ5 C07 C07 C 0 1 Y N N 29.463 26.092 38.953 5.517 0.556 1.077 C07 LQ5 5 LQ5 O08 O08 O 0 1 N N N 30.619 25.507 38.440 6.659 -0.091 1.432 O08 LQ5 6 LQ5 C09 C09 C 0 1 Y N N 31.802 26.094 38.043 7.271 -0.860 0.500 C09 LQ5 7 LQ5 C10 C10 C 0 1 Y N N 31.972 27.485 37.986 8.385 -1.628 0.836 C10 LQ5 8 LQ5 C11 C11 C 0 1 Y N N 33.230 27.946 37.563 8.977 -2.398 -0.147 C11 LQ5 9 LQ5 N12 N12 N 0 1 Y N N 34.217 27.065 37.255 8.473 -2.384 -1.372 N12 LQ5 10 LQ5 C13 C13 C 0 1 Y N N 34.018 25.725 37.314 7.413 -1.644 -1.663 C13 LQ5 11 LQ5 N17 N17 N 0 1 N N N 35.009 24.862 36.995 6.916 -1.656 -2.954 N17 LQ5 12 LQ5 C18 C18 C 0 1 N N N 24.795 28.296 39.733 0.816 2.045 0.363 C18 LQ5 13 LQ5 N19 N19 N 0 1 N N N 23.729 28.618 40.499 -0.319 2.615 -0.088 N19 LQ5 14 LQ5 C20 C20 C 0 1 Y N N 22.554 29.360 40.178 -1.559 2.046 0.221 C20 LQ5 15 LQ5 C21 C21 C 0 1 Y N N 21.604 29.565 41.194 -1.757 1.437 1.453 C21 LQ5 16 LQ5 C22 C22 C 0 1 Y N N 20.445 30.312 40.924 -2.983 0.876 1.755 C22 LQ5 17 LQ5 C23 C23 C 0 1 Y N N 20.204 30.898 39.658 -4.012 0.921 0.832 C23 LQ5 18 LQ5 C24 C24 C 0 1 Y N N 21.173 30.719 38.626 -3.817 1.526 -0.395 C24 LQ5 19 LQ5 C25 C25 C 0 1 N N N 20.994 31.294 37.189 -4.942 1.573 -1.398 C25 LQ5 20 LQ5 F26 F26 F 0 1 N N N 22.076 31.112 36.380 -4.508 2.231 -2.554 F26 LQ5 21 LQ5 F27 F27 F 0 1 N N N 20.715 32.633 37.169 -5.332 0.269 -1.722 F27 LQ5 22 LQ5 F28 F28 F 0 1 N N N 19.954 30.644 36.623 -6.028 2.263 -0.849 F28 LQ5 23 LQ5 C29 C29 C 0 1 Y N N 22.332 29.945 38.910 -2.596 2.094 -0.701 C29 LQ5 24 LQ5 C30 C30 C 0 1 N N N 18.896 31.715 39.497 -5.347 0.308 1.165 C30 LQ5 25 LQ5 N31 N31 N 0 1 N N N 17.660 30.996 39.877 -5.449 -1.016 0.536 N31 LQ5 26 LQ5 C32 C32 C 0 1 N N N 17.228 29.957 38.902 -6.817 -1.544 0.637 C32 LQ5 27 LQ5 N30 N30 N 0 1 Y N N 32.813 25.254 37.708 6.815 -0.897 -0.747 N30 LQ5 28 LQ5 C33 C33 C 0 1 N N N 16.050 29.133 39.485 -6.899 -2.884 -0.098 C33 LQ5 29 LQ5 N34 N34 N 0 1 N N N 14.930 30.050 39.847 -5.932 -3.821 0.489 N34 LQ5 30 LQ5 C26 C26 C 0 1 Y N N 28.088 26.976 40.754 4.380 2.579 0.476 C26 LQ5 31 LQ5 C35 C35 C 0 1 N N N 15.337 31.120 40.816 -4.564 -3.294 0.388 C35 LQ5 32 LQ5 C36 C36 C 0 1 N N N 16.565 31.925 40.290 -4.481 -1.954 1.123 C36 LQ5 33 LQ5 C37 C37 C 0 1 N N N 13.725 29.291 40.267 -6.033 -5.145 -0.140 C37 LQ5 34 LQ5 O39 O39 O 0 1 N N N 24.892 28.597 38.551 0.759 1.085 1.107 O39 LQ5 35 LQ5 N20 N20 N 0 1 N N N 25.772 27.624 40.367 2.013 2.538 -0.010 N20 LQ5 36 LQ5 H02 H02 H 0 1 N N N 28.476 25.920 37.039 4.311 -1.214 1.150 H02 LQ5 37 LQ5 H03 H03 H 0 1 N N N 26.327 26.862 37.836 2.244 -0.045 0.504 H03 LQ5 38 LQ5 H26 H26 H 0 1 N N N 27.975 27.264 41.789 4.397 3.642 0.287 H26 LQ5 39 LQ5 H20 H20 H 0 1 N N N 25.606 27.451 41.338 2.060 3.354 -0.532 H20 LQ5 40 LQ5 H06 H06 H 0 1 N N N 30.145 26.345 40.991 6.464 2.471 0.929 H06 LQ5 41 LQ5 H10 H10 H 0 1 N N N 31.178 28.166 38.253 8.776 -1.621 1.843 H10 LQ5 42 LQ5 H11 H11 H 0 1 N N N 33.413 29.007 37.482 9.842 -3.003 0.080 H11 LQ5 43 LQ5 H171 H171 H 0 0 N N N 35.827 25.375 36.736 7.342 -2.202 -3.633 H171 LQ5 44 LQ5 H172 H172 H 0 0 N N N 35.214 24.284 37.785 6.140 -1.119 -3.180 H172 LQ5 45 LQ5 H19 H19 H 0 1 N N N 23.771 28.283 41.440 -0.275 3.420 -0.628 H19 LQ5 46 LQ5 H21 H21 H 0 1 N N N 21.764 29.150 42.178 -0.954 1.401 2.174 H21 LQ5 47 LQ5 H29 H29 H 0 1 N N N 23.066 29.799 38.132 -2.446 2.572 -1.658 H29 LQ5 48 LQ5 H22 H22 H 0 1 N N N 19.714 30.443 41.708 -3.138 0.402 2.713 H22 LQ5 49 LQ5 H301 H301 H 0 0 N N N 18.975 32.614 40.126 -5.440 0.204 2.246 H301 LQ5 50 LQ5 H302 H302 H 0 0 N N N 18.807 32.013 38.442 -6.145 0.950 0.792 H302 LQ5 51 LQ5 H321 H321 H 0 0 N N N 16.905 30.445 37.971 -7.075 -1.688 1.686 H321 LQ5 52 LQ5 H322 H322 H 0 0 N N N 18.072 29.284 38.690 -7.513 -0.838 0.184 H322 LQ5 53 LQ5 H361 H361 H 0 0 N N N 16.933 32.587 41.088 -3.475 -1.547 1.025 H361 LQ5 54 LQ5 H362 H362 H 0 0 N N N 16.258 32.530 39.424 -4.713 -2.102 2.178 H362 LQ5 55 LQ5 H331 H331 H 0 0 N N N 15.702 28.409 38.734 -7.905 -3.291 0.000 H331 LQ5 56 LQ5 H332 H332 H 0 0 N N N 16.388 28.595 40.383 -6.668 -2.735 -1.153 H332 LQ5 57 LQ5 H351 H351 H 0 0 N N N 14.493 31.810 40.963 -3.867 -4.000 0.840 H351 LQ5 58 LQ5 H352 H352 H 0 0 N N N 15.600 30.652 41.776 -4.306 -3.150 -0.661 H352 LQ5 59 LQ5 H371 H371 H 0 0 N N N 12.920 29.994 40.526 -5.831 -5.056 -1.208 H371 LQ5 60 LQ5 H372 H372 H 0 0 N N N 13.394 28.643 39.442 -5.306 -5.819 0.313 H372 LQ5 61 LQ5 H373 H373 H 0 0 N N N 13.968 28.673 41.144 -7.038 -5.542 0.007 H373 LQ5 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LQ5 C02 C03 SING Y N 1 LQ5 C02 C07 DOUB Y N 2 LQ5 C03 C04 DOUB Y N 3 LQ5 C04 C26 SING Y N 4 LQ5 C04 N20 SING N N 5 LQ5 C06 C07 SING Y N 6 LQ5 C06 C26 DOUB Y N 7 LQ5 C07 O08 SING N N 8 LQ5 O08 C09 SING N N 9 LQ5 C09 C10 DOUB Y N 10 LQ5 C09 N30 SING Y N 11 LQ5 C10 C11 SING Y N 12 LQ5 C11 N12 DOUB Y N 13 LQ5 N12 C13 SING Y N 14 LQ5 C13 N17 SING N N 15 LQ5 C13 N30 DOUB Y N 16 LQ5 C18 N19 SING N N 17 LQ5 C18 O39 DOUB N N 18 LQ5 C18 N20 SING N N 19 LQ5 N19 C20 SING N N 20 LQ5 C20 C21 SING Y N 21 LQ5 C20 C29 DOUB Y N 22 LQ5 C21 C22 DOUB Y N 23 LQ5 C22 C23 SING Y N 24 LQ5 C23 C24 DOUB Y N 25 LQ5 C23 C30 SING N N 26 LQ5 C24 C25 SING N N 27 LQ5 C24 C29 SING Y N 28 LQ5 C25 F26 SING N N 29 LQ5 C25 F27 SING N N 30 LQ5 C25 F28 SING N N 31 LQ5 C30 N31 SING N N 32 LQ5 N31 C32 SING N N 33 LQ5 N31 C36 SING N N 34 LQ5 C32 C33 SING N N 35 LQ5 C33 N34 SING N N 36 LQ5 N34 C35 SING N N 37 LQ5 N34 C37 SING N N 38 LQ5 C35 C36 SING N N 39 LQ5 C02 H02 SING N N 40 LQ5 C03 H03 SING N N 41 LQ5 C26 H26 SING N N 42 LQ5 N20 H20 SING N N 43 LQ5 C06 H06 SING N N 44 LQ5 C10 H10 SING N N 45 LQ5 C11 H11 SING N N 46 LQ5 N17 H171 SING N N 47 LQ5 N17 H172 SING N N 48 LQ5 N19 H19 SING N N 49 LQ5 C21 H21 SING N N 50 LQ5 C29 H29 SING N N 51 LQ5 C22 H22 SING N N 52 LQ5 C30 H301 SING N N 53 LQ5 C30 H302 SING N N 54 LQ5 C32 H321 SING N N 55 LQ5 C32 H322 SING N N 56 LQ5 C36 H361 SING N N 57 LQ5 C36 H362 SING N N 58 LQ5 C33 H331 SING N N 59 LQ5 C33 H332 SING N N 60 LQ5 C35 H351 SING N N 61 LQ5 C35 H352 SING N N 62 LQ5 C37 H371 SING N N 63 LQ5 C37 H372 SING N N 64 LQ5 C37 H373 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LQ5 InChI InChI 1.03 "InChI=1S/C24H26F3N7O2/c1-33-10-12-34(13-11-33)15-16-2-3-18(14-20(16)24(25,26)27)31-23(35)30-17-4-6-19(7-5-17)36-21-8-9-29-22(28)32-21/h2-9,14H,10-13,15H2,1H3,(H2,28,29,32)(H2,30,31,35)" LQ5 InChIKey InChI 1.03 PWDLXPJQFNVTNL-UHFFFAOYSA-N LQ5 SMILES_CANONICAL CACTVS 3.385 "CN1CCN(CC1)Cc2ccc(NC(=O)Nc3ccc(Oc4ccnc(N)n4)cc3)cc2C(F)(F)F" LQ5 SMILES CACTVS 3.385 "CN1CCN(CC1)Cc2ccc(NC(=O)Nc3ccc(Oc4ccnc(N)n4)cc3)cc2C(F)(F)F" LQ5 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CN1CCN(CC1)Cc2ccc(cc2C(F)(F)F)NC(=O)Nc3ccc(cc3)Oc4ccnc(n4)N" LQ5 SMILES "OpenEye OEToolkits" 1.7.6 "CN1CCN(CC1)Cc2ccc(cc2C(F)(F)F)NC(=O)Nc3ccc(cc3)Oc4ccnc(n4)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LQ5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-[4-(2-azanylpyrimidin-4-yl)oxyphenyl]-3-[4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LQ5 "Create component" 2015-04-27 EBI LQ5 "Initial release" 2015-07-22 RCSB #