data_LSP # _chem_comp.id LSP _chem_comp.name "(7S)-4,7-DIHYDROXY-10-OXO-3,5,9-TRIOXA-4-PHOSPHAUNDECAN-1-AMINIUM 4-OXIDE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H17 N O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 1-ACETYL-2-LYSO-SN-GLYCERO-3-PHOSPHOETHANOLAMINE _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2006-02-01 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 258.186 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LSP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2DDE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LSP N N N 1 1 N N N 1.095 3.204 1.399 -5.709 -1.414 1.005 N LSP 1 LSP C12 C12 C 0 1 N N N 1.695 3.924 2.584 -5.676 -0.366 -0.024 C12 LSP 2 LSP C11 C11 C 0 1 N N N 0.701 4.943 3.147 -4.364 0.414 0.084 C11 LSP 3 LSP P P P 0 1 N N S 1.468 6.979 4.693 -1.928 0.430 -0.091 P LSP 4 LSP O12 O12 O 0 1 N N N 0.670 6.275 5.722 -1.875 1.049 1.252 O12 LSP 5 LSP O14 O14 O 0 1 N N N 1.207 8.423 4.499 -1.931 1.583 -1.214 O14 LSP 6 LSP O11 O11 O 0 1 N N N 3.021 6.775 5.012 -0.642 -0.517 -0.297 O11 LSP 7 LSP O13 O13 O 0 1 N N N 1.326 6.225 3.283 -3.269 -0.451 -0.223 O13 LSP 8 LSP C1 C1 C 0 1 N N N 3.506 5.580 5.632 0.510 0.293 -0.052 C1 LSP 9 LSP C2 C2 C 0 1 N N S 5.009 5.411 5.340 1.774 -0.550 -0.232 C2 LSP 10 LSP O21 O21 O 0 1 N N N 5.647 6.681 5.349 1.883 -0.960 -1.596 O21 LSP 11 LSP C3 C3 C 0 1 N N N 5.712 4.494 6.354 3.000 0.281 0.151 C3 LSP 12 LSP O31 O31 O 0 1 N N N 5.770 5.141 7.635 4.187 -0.554 0.094 O31 LSP 13 LSP C31 C31 C 0 1 N N N 6.691 4.587 8.435 5.388 -0.033 0.392 C31 LSP 14 LSP O32 O32 O 0 1 N N N 7.899 4.672 8.291 5.481 1.129 0.708 O32 LSP 15 LSP C32 C32 C 0 1 N N N 6.000 3.824 9.557 6.620 -0.899 0.333 C32 LSP 16 LSP HN1 1HN H 0 1 N N N 0.213 2.811 1.660 -4.932 -2.043 0.869 HN1 LSP 17 LSP HN2 2HN H 0 1 N N N 1.712 2.474 1.105 -5.643 -0.991 1.919 HN2 LSP 18 LSP HN3 3HN H 0 1 N N N 0.962 3.851 0.648 -6.574 -1.928 0.934 HN3 LSP 19 LSP H121 1H12 H 0 0 N N N 2.604 4.452 2.259 -6.516 0.314 0.124 H121 LSP 20 LSP H122 2H12 H 0 0 N N N 1.942 3.190 3.365 -5.747 -0.823 -1.011 H122 LSP 21 LSP H111 1H11 H 0 0 N N N 0.362 4.603 4.137 -4.251 0.797 1.099 H111 LSP 22 LSP H112 2H11 H 0 0 N N N -0.155 5.029 2.462 -4.377 1.247 -0.619 H112 LSP 23 LSP H14 H14 H 0 1 N N N 1.151 8.852 5.345 -1.966 1.138 -2.072 H14 LSP 24 LSP H11 H11 H 0 1 N N N 2.959 4.715 5.229 0.472 0.679 0.967 H11 LSP 25 LSP H12 H12 H 0 1 N N N 3.351 5.645 6.719 0.525 1.125 -0.756 H12 LSP 26 LSP H2 H2 H 0 1 N N N 5.090 4.940 4.349 1.717 -1.430 0.409 H2 LSP 27 LSP H21 H21 H 0 1 N N N 5.789 6.958 6.246 1.930 -0.154 -2.127 H21 LSP 28 LSP H31 H31 H 0 1 N N N 6.734 4.283 6.006 2.876 0.668 1.162 H31 LSP 29 LSP H32 H32 H 0 1 N N N 5.150 3.553 6.446 3.107 1.113 -0.546 H32 LSP 30 LSP H321 1H32 H 0 0 N N N 5.033 4.298 9.781 6.783 -1.365 1.305 H321 LSP 31 LSP H322 2H32 H 0 0 N N N 6.634 3.840 10.456 6.484 -1.673 -0.422 H322 LSP 32 LSP H323 3H32 H 0 0 N N N 5.833 2.783 9.244 7.483 -0.286 0.074 H323 LSP 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LSP N C12 SING N N 1 LSP N HN1 SING N N 2 LSP N HN2 SING N N 3 LSP N HN3 SING N N 4 LSP C12 C11 SING N N 5 LSP C12 H121 SING N N 6 LSP C12 H122 SING N N 7 LSP C11 O13 SING N N 8 LSP C11 H111 SING N N 9 LSP C11 H112 SING N N 10 LSP P O12 DOUB N N 11 LSP P O14 SING N N 12 LSP P O11 SING N N 13 LSP P O13 SING N N 14 LSP O14 H14 SING N N 15 LSP O11 C1 SING N N 16 LSP C1 C2 SING N N 17 LSP C1 H11 SING N N 18 LSP C1 H12 SING N N 19 LSP C2 O21 SING N N 20 LSP C2 C3 SING N N 21 LSP C2 H2 SING N N 22 LSP O21 H21 SING N N 23 LSP C3 O31 SING N N 24 LSP C3 H31 SING N N 25 LSP C3 H32 SING N N 26 LSP O31 C31 SING N N 27 LSP C31 O32 DOUB N N 28 LSP C31 C32 SING N N 29 LSP C32 H321 SING N N 30 LSP C32 H322 SING N N 31 LSP C32 H323 SING N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LSP SMILES ACDLabs 10.04 "O=C(OCC(O)COP(=O)(OCC[NH3+])O)C" LSP SMILES_CANONICAL CACTVS 3.341 "CC(=O)OC[C@H](O)CO[P@](O)(=O)OCC[NH3+]" LSP SMILES CACTVS 3.341 "CC(=O)OC[CH](O)CO[P](O)(=O)OCC[NH3+]" LSP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)OC[C@@H](CO[P@@](=O)(O)OCC[NH3+])O" LSP SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)OCC(COP(=O)(O)OCC[NH3+])O" LSP InChI InChI 1.03 "InChI=1S/C7H16NO7P/c1-6(9)13-4-7(10)5-15-16(11,12)14-3-2-8/h7,10H,2-5,8H2,1H3,(H,11,12)/p+1/t7-/m0/s1" LSP InChIKey InChI 1.03 CWRILEGKIAOYKP-ZETCQYMHSA-O # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LSP "SYSTEMATIC NAME" ACDLabs 10.04 "(4S,7S)-4,7-dihydroxy-10-oxo-3,5,9-trioxa-4-phosphaundecan-1-aminium 4-oxide" LSP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[[(2S)-3-acetyloxy-2-hydroxy-propoxy]-hydroxy-phosphoryl]oxyethylazanium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LSP "Create component" 2006-02-01 RCSB LSP "Modify descriptor" 2011-06-04 RCSB LSP "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id LSP _pdbx_chem_comp_synonyms.name 1-ACETYL-2-LYSO-SN-GLYCERO-3-PHOSPHOETHANOLAMINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##