data_LVM # _chem_comp.id LVM _chem_comp.name "N-(4-methylpyridin-3-yl)-2-(spiro[2.3]hexan-5-yl)acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H18 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-15 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 230.306 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LVM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GCX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LVM N1 N1 N 0 1 N N N N N N 8.262 -0.590 20.647 1.256 0.917 0.251 N1 LVM 1 LVM C4 C1 C 0 1 Y N N N N N 7.845 -0.139 18.276 2.333 -1.249 0.175 C4 LVM 2 LVM C5 C2 C 0 1 Y N N N N N 7.484 -0.016 19.618 2.414 0.137 0.154 C5 LVM 3 LVM C6 C3 C 0 1 N N N N N N 9.430 -0.106 21.105 0.067 0.409 -0.128 C6 LVM 4 LVM C7 C4 C 0 1 N N N N N N 9.931 -0.774 22.361 -1.196 1.200 0.094 C7 LVM 5 LVM C8 C5 C 0 1 N N N N N N 11.269 -1.485 22.195 -2.395 0.402 -0.422 C8 LVM 6 LVM C10 C6 C 0 1 N N N N N N 13.285 -1.334 23.033 -4.367 -0.140 0.105 C10 LVM 7 LVM C13 C7 C 0 1 N N N N N N 12.527 -0.639 21.888 -2.987 -0.564 0.620 C13 LVM 8 LVM O O1 O 0 1 N N N N N N 10.024 0.836 20.594 0.014 -0.686 -0.648 O LVM 9 LVM C12 C8 C 0 1 N N N N N N 14.363 -0.795 23.913 -5.731 -0.357 0.751 C12 LVM 10 LVM C11 C9 C 0 1 N N N N N N 14.636 -1.972 23.013 -5.416 -0.985 -0.610 C11 LVM 11 LVM C9 C10 C 0 1 N N N N N N 11.947 -1.923 23.514 -3.724 1.174 -0.353 C9 LVM 12 LVM C1 C11 C 0 1 Y N N N N N 6.345 0.738 19.948 3.664 0.739 0.036 C1 LVM 13 LVM C C12 C 0 1 N N N N N N 5.909 0.942 21.377 3.799 2.240 0.010 C LVM 14 LVM N N2 N 0 1 Y N N N N N 7.160 0.428 17.278 3.422 -1.987 0.088 N LVM 15 LVM C3 C13 C 0 1 Y N N N N N 6.073 1.139 17.603 4.620 -1.448 -0.020 C3 LVM 16 LVM C2 C14 C 0 1 Y N N N N N 5.640 1.320 18.902 4.781 -0.075 -0.058 C2 LVM 17 LVM H1 H1 H 0 1 N N N N N N 7.915 -1.427 21.071 1.309 1.822 0.595 H1 LVM 18 LVM H2 H2 H 0 1 N N N N N N 8.721 -0.721 18.031 1.369 -1.727 0.267 H2 LVM 19 LVM H3 H3 H 0 1 N N N N N N 10.042 -0.006 23.140 -1.320 1.394 1.160 H3 LVM 20 LVM H4 H4 H 0 1 N N N N N N 9.183 -1.515 22.680 -1.131 2.146 -0.442 H4 LVM 21 LVM H5 H5 H 0 1 N N N N N N 11.186 -2.331 21.497 -2.209 -0.061 -1.391 H5 LVM 22 LVM H6 H6 H 0 1 N N N N N N 12.956 -0.821 20.892 -2.752 -1.611 0.429 H6 LVM 23 LVM H7 H7 H 0 1 N N N N N N 12.387 0.442 22.035 -2.795 -0.266 1.651 H7 LVM 24 LVM H8 H8 H 0 1 N N N N N N 14.307 -0.936 25.002 -5.780 -1.022 1.613 H8 LVM 25 LVM H9 H9 H 0 1 N N N N N N 14.816 0.183 23.693 -6.420 0.488 0.769 H9 LVM 26 LVM H10 H10 H 0 1 N N N N N N 14.779 -2.974 23.444 -5.898 -0.554 -1.487 H10 LVM 27 LVM H11 H11 H 0 1 N N N N N N 15.288 -1.855 22.135 -5.257 -2.063 -0.642 H11 LVM 28 LVM H12 H12 H 0 1 N N N N N N 11.539 -1.434 24.411 -3.737 1.955 0.407 H12 LVM 29 LVM H13 H13 H 0 1 N N N N N N 11.967 -3.012 23.667 -4.080 1.520 -1.324 H13 LVM 30 LVM H14 H14 H 0 1 N N N N N N 5.210 0.143 21.665 3.924 2.611 1.027 H14 LVM 31 LVM H15 H15 H 0 1 N N N N N N 6.789 0.915 22.036 4.668 2.517 -0.587 H15 LVM 32 LVM H16 H16 H 0 1 N N N N N N 5.409 1.917 21.472 2.902 2.678 -0.429 H16 LVM 33 LVM H17 H17 H 0 1 N N N N N N 5.504 1.596 16.807 5.488 -2.088 -0.089 H17 LVM 34 LVM H18 H18 H 0 1 N N N N N N 4.758 1.911 19.103 5.766 0.357 -0.147 H18 LVM 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LVM N C3 DOUB Y N 1 LVM N C4 SING Y N 2 LVM C3 C2 SING Y N 3 LVM C4 C5 DOUB Y N 4 LVM C2 C1 DOUB Y N 5 LVM C5 C1 SING Y N 6 LVM C5 N1 SING N N 7 LVM C1 C SING N N 8 LVM O C6 DOUB N N 9 LVM N1 C6 SING N N 10 LVM C6 C7 SING N N 11 LVM C13 C8 SING N N 12 LVM C13 C10 SING N N 13 LVM C8 C7 SING N N 14 LVM C8 C9 SING N N 15 LVM C11 C10 SING N N 16 LVM C11 C12 SING N N 17 LVM C10 C9 SING N N 18 LVM C10 C12 SING N N 19 LVM N1 H1 SING N N 20 LVM C4 H2 SING N N 21 LVM C7 H3 SING N N 22 LVM C7 H4 SING N N 23 LVM C8 H5 SING N N 24 LVM C13 H6 SING N N 25 LVM C13 H7 SING N N 26 LVM C12 H8 SING N N 27 LVM C12 H9 SING N N 28 LVM C11 H10 SING N N 29 LVM C11 H11 SING N N 30 LVM C9 H12 SING N N 31 LVM C9 H13 SING N N 32 LVM C H14 SING N N 33 LVM C H15 SING N N 34 LVM C H16 SING N N 35 LVM C3 H17 SING N N 36 LVM C2 H18 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LVM SMILES ACDLabs 12.01 "O=C(Nc1cnccc1C)CC1CC2(CC2)C1" LVM InChI InChI 1.06 "InChI=1S/C14H18N2O/c1-10-2-5-15-9-12(10)16-13(17)6-11-7-14(8-11)3-4-14/h2,5,9,11H,3-4,6-8H2,1H3,(H,16,17)" LVM InChIKey InChI 1.06 BEZLDJLMZNYTJV-UHFFFAOYSA-N LVM SMILES_CANONICAL CACTVS 3.385 "Cc1ccncc1NC(=O)CC2CC3(CC3)C2" LVM SMILES CACTVS 3.385 "Cc1ccncc1NC(=O)CC2CC3(CC3)C2" LVM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)CC2CC3(C2)CC3" LVM SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)CC2CC3(C2)CC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LVM "SYSTEMATIC NAME" ACDLabs 12.01 "N-(4-methylpyridin-3-yl)-2-(spiro[2.3]hexan-5-yl)acetamide" LVM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-(4-methylpyridin-3-yl)-2-spiro[2.3]hexan-5-yl-ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LVM "Create component" 2023-08-15 RCSB LVM "Initial release" 2023-11-08 RCSB #