data_LVO # _chem_comp.id LVO _chem_comp.name "5-acetamido-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-methyl-9-O-octanoyl-D-glycero-D-galacto-non-2-enonic acid" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C21 H36 N4 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;5-(acetylamino)-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-methyl-9-O-octanoyl-D-glycero-D-galacto-non-2-enonic acid; Laninamivir octanoate ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-09-07 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 472.533 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LVO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3TI4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 LVO ;5-(acetylamino)-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-methyl-9-O-octanoyl-D-glycero-D-galacto-non-2-enonic acid ; PDB ? 2 LVO "Laninamivir octanoate" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LVO C2 CAA C 0 1 N N N 29.567 13.378 -22.779 -3.299 -2.180 -0.168 C2 LVO 1 LVO C3 CAB C 0 1 N N N 31.004 13.647 -22.532 -4.472 -1.635 0.117 C3 LVO 2 LVO C4 CAC C 0 1 N N S 31.329 14.513 -21.288 -4.622 -0.174 0.446 C4 LVO 3 LVO C5 CAD C 0 1 N N R 30.186 14.558 -20.255 -3.376 0.584 -0.025 C5 LVO 4 LVO C6 CAE C 0 1 N N R 28.771 14.523 -20.881 -2.136 -0.191 0.440 C6 LVO 5 LVO O6 OAF O 0 1 N N N 28.637 13.518 -21.821 -2.143 -1.473 -0.195 O6 LVO 6 LVO C1 CAG C 0 1 N N N 29.187 12.506 -23.929 -3.247 -3.622 -0.464 C1 LVO 7 LVO O1B OAH O 0 1 N N N 30.180 11.966 -24.648 -2.070 -4.208 -0.758 O1B LVO 8 LVO O1A OAI O 0 1 N N N 28.067 12.412 -24.174 -4.266 -4.284 -0.442 O1A LVO 9 LVO C7 CAJ C 0 1 N N R 27.716 14.379 -19.832 -0.872 0.573 0.045 C7 LVO 10 LVO C8 CAK C 0 1 N N R 26.408 14.293 -20.538 0.361 -0.262 0.399 C8 LVO 11 LVO C9 CAL C 0 1 N N N 25.363 13.843 -19.536 1.626 0.554 0.124 C9 LVO 12 LVO O9 OAM O 0 1 N N N 24.430 12.930 -20.016 2.795 -0.284 0.323 O9 LVO 13 LVO CAN CAN C 0 1 N N N 24.625 11.664 -20.077 3.994 0.285 0.120 CAN LVO 14 LVO OAV OAV O 0 1 N N N 24.868 10.964 -19.102 4.064 1.444 -0.212 OAV LVO 15 LVO O7 OAW O 0 1 N N N 27.946 13.228 -19.119 -0.888 0.826 -1.362 O7 LVO 16 LVO C13 CAX C 0 1 N N N 27.653 13.374 -17.809 -0.537 2.165 -1.716 C13 LVO 17 LVO O8 OAY O 0 1 N N N 26.083 15.443 -21.158 0.314 -0.616 1.783 O8 LVO 18 LVO N4 NAZ N 0 1 N N N 32.656 14.355 -20.730 -5.805 0.361 -0.232 N4 LVO 19 LVO C12 CBA C 0 1 N N N 33.440 15.388 -20.177 -7.045 0.238 0.350 C12 LVO 20 LVO N13 NBB N 0 1 N N N 34.522 15.032 -19.559 -8.155 0.740 -0.287 N13 LVO 21 LVO N12 NBC N 0 1 N N N 33.171 16.608 -20.436 -7.167 -0.353 1.505 N12 LVO 22 LVO C10 CBD C 0 1 N N N 30.980 15.319 -18.060 -4.041 2.928 -0.041 C10 LVO 23 LVO C11 CBE C 0 1 N N N 31.215 16.587 -17.325 -4.031 4.311 0.559 C11 LVO 24 LVO O10 OBF O 0 1 N N N 31.240 14.306 -17.625 -4.656 2.716 -1.065 O10 LVO 25 LVO N5 NBG N 0 1 N N N 30.331 15.569 -19.280 -3.366 1.928 0.559 N5 LVO 26 LVO H3 HAB H 0 1 N N N 31.778 13.263 -23.180 -5.353 -2.261 0.114 H3 LVO 27 LVO H4 HAC H 0 1 N N N 31.385 15.534 -21.693 -4.735 -0.054 1.523 H4 LVO 28 LVO H5 HAD H 0 1 N N N 30.286 13.610 -19.707 -3.379 0.656 -1.113 H5 LVO 29 LVO H6 HAE H 0 1 N N N 28.637 15.487 -21.394 -2.166 -0.317 1.523 H6 LVO 30 LVO H7 HAJ H 0 1 N N N 27.722 15.229 -19.134 -0.836 1.520 0.584 H7 LVO 31 LVO H8 HAK H 0 1 N N N 26.471 13.553 -21.349 0.373 -1.167 -0.208 H8 LVO 32 LVO H91 H1AL H 0 1 N N N 25.892 13.367 -18.697 1.608 0.915 -0.904 H91 LVO 33 LVO H92 H2AL H 0 1 N N N 24.813 14.737 -19.207 1.666 1.403 0.807 H92 LVO 34 LVO C15 C15 C 0 1 N N N 24.549 10.984 -21.457 5.252 -0.523 0.308 C15 LVO 35 LVO H131 H1AX H 0 0 N N N 27.852 12.430 -17.281 -1.248 2.858 -1.267 H131 LVO 36 LVO H132 H2AX H 0 0 N N N 28.277 14.172 -17.381 0.466 2.386 -1.350 H132 LVO 37 LVO H133 H3AX H 0 0 N N N 26.591 13.639 -17.698 -0.560 2.272 -2.800 H133 LVO 38 LVO HO8 HOAY H 0 1 N N N 25.245 15.343 -21.593 0.301 0.142 2.383 HO8 LVO 39 LVO HN41 HNAZ H 0 0 N N N 33.049 13.436 -20.738 -5.714 0.801 -1.092 HN41 LVO 40 LVO HN13 H1BB H 0 0 N N N 35.182 15.724 -19.267 -8.064 1.181 -1.146 HN13 LVO 41 LVO HN14 H2BB H 0 0 N N N 34.697 14.065 -19.374 -9.030 0.654 0.124 HN14 LVO 42 LVO HN12 HBC H 0 0 N N N 33.885 17.227 -20.108 -8.042 -0.440 1.915 HN12 LVO 43 LVO H111 H1BE H 0 0 N N N 31.660 16.366 -16.344 -4.626 4.981 -0.061 H111 LVO 44 LVO H112 H2BE H 0 0 N N N 31.901 17.224 -17.903 -4.453 4.274 1.563 H112 LVO 45 LVO H113 H3BE H 0 0 N N N 30.258 17.111 -17.184 -3.006 4.677 0.609 H113 LVO 46 LVO HN5 HNBG H 0 1 N N N 29.964 16.481 -19.462 -2.874 2.098 1.377 HN5 LVO 47 LVO C16 C16 C 0 1 N N N 24.777 9.466 -21.580 6.470 0.356 0.016 C16 LVO 48 LVO C17 C17 C 0 1 N N N 24.701 8.786 -22.960 7.748 -0.465 0.207 C17 LVO 49 LVO C18 C18 C 0 1 N N N 24.928 7.268 -23.084 8.966 0.414 -0.085 C18 LVO 50 LVO C19 C19 C 0 1 N N N 24.853 6.588 -24.464 10.243 -0.406 0.105 C19 LVO 51 LVO C20 C20 C 0 1 N N N 25.080 5.070 -24.588 11.462 0.473 -0.186 C20 LVO 52 LVO C21 C21 C 0 1 N N N 25.004 4.390 -25.967 12.739 -0.347 0.004 C21 LVO 53 LVO HOB1 H22 H 0 0 N N N 29.816 11.495 -25.389 -2.086 -5.157 -0.945 HOB1 LVO 54 LVO H23 H23 H 0 1 N N N 23.533 11.172 -21.834 5.302 -0.885 1.335 H23 LVO 55 LVO H24 H24 H 0 1 N N N 25.324 11.460 -22.075 5.244 -1.372 -0.376 H24 LVO 56 LVO H25 H25 H 0 1 N N N 25.793 9.278 -21.203 6.420 0.717 -1.011 H25 LVO 57 LVO H26 H26 H 0 1 N N N 24.002 8.990 -20.962 6.478 1.204 0.700 H26 LVO 58 LVO H27 H27 H 0 1 N N N 23.685 8.974 -23.337 7.798 -0.826 1.234 H27 LVO 59 LVO H28 H28 H 0 1 N N N 25.477 9.262 -23.578 7.740 -1.313 -0.477 H28 LVO 60 LVO H29 H29 H 0 1 N N N 25.944 7.080 -22.706 8.916 0.775 -1.112 H29 LVO 61 LVO H30 H30 H 0 1 N N N 24.152 6.792 -22.467 8.974 1.263 0.599 H30 LVO 62 LVO H31 H31 H 0 1 N N N 23.837 6.776 -24.842 10.293 -0.767 1.133 H31 LVO 63 LVO H32 H32 H 0 1 N N N 25.629 7.064 -25.081 10.236 -1.255 -0.578 H32 LVO 64 LVO H33 H33 H 0 1 N N N 26.096 4.882 -24.211 11.411 0.834 -1.213 H33 LVO 65 LVO H34 H34 H 0 1 N N N 24.304 4.594 -23.970 11.469 1.321 0.498 H34 LVO 66 LVO H35 H35 H 0 1 N N N 25.192 3.312 -25.856 13.607 0.278 -0.203 H35 LVO 67 LVO H36 H36 H 0 1 N N N 24.004 4.545 -26.397 12.789 -0.709 1.031 H36 LVO 68 LVO H37 H37 H 0 1 N N N 25.762 4.827 -26.634 12.731 -1.196 -0.680 H37 LVO 69 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LVO C2 C3 DOUB N N 1 LVO C2 O6 SING N N 2 LVO C3 C4 SING N N 3 LVO C3 H3 SING N N 4 LVO C4 N4 SING N N 5 LVO C4 C5 SING N N 6 LVO C4 H4 SING N N 7 LVO C5 N5 SING N N 8 LVO C5 H5 SING N N 9 LVO C6 C5 SING N N 10 LVO C6 C7 SING N N 11 LVO C6 H6 SING N N 12 LVO O6 C6 SING N N 13 LVO C1 C2 SING N N 14 LVO O1B C1 SING N N 15 LVO O1A C1 DOUB N N 16 LVO C7 O7 SING N N 17 LVO C7 H7 SING N N 18 LVO C8 C7 SING N N 19 LVO C8 C9 SING N N 20 LVO C8 H8 SING N N 21 LVO C9 H91 SING N N 22 LVO C9 H92 SING N N 23 LVO O9 C9 SING N N 24 LVO CAN O9 SING N N 25 LVO CAN OAV DOUB N N 26 LVO CAN C15 SING N N 27 LVO O7 C13 SING N N 28 LVO C13 H131 SING N N 29 LVO C13 H132 SING N N 30 LVO C13 H133 SING N N 31 LVO O8 C8 SING N N 32 LVO O8 HO8 SING N N 33 LVO N4 C12 SING N N 34 LVO N4 HN41 SING N N 35 LVO C12 N13 SING N N 36 LVO N13 HN13 SING N N 37 LVO N13 HN14 SING N N 38 LVO N12 C12 DOUB N N 39 LVO N12 HN12 SING N N 40 LVO C10 O10 DOUB N N 41 LVO C10 C11 SING N N 42 LVO C11 H111 SING N N 43 LVO C11 H112 SING N N 44 LVO C11 H113 SING N N 45 LVO N5 C10 SING N N 46 LVO N5 HN5 SING N N 47 LVO C15 C16 SING N N 48 LVO C16 C17 SING N N 49 LVO C17 C18 SING N N 50 LVO C18 C19 SING N N 51 LVO C19 C20 SING N N 52 LVO C20 C21 SING N N 53 LVO O1B HOB1 SING N N 54 LVO C15 H23 SING N N 55 LVO C15 H24 SING N N 56 LVO C16 H25 SING N N 57 LVO C16 H26 SING N N 58 LVO C17 H27 SING N N 59 LVO C17 H28 SING N N 60 LVO C18 H29 SING N N 61 LVO C18 H30 SING N N 62 LVO C19 H31 SING N N 63 LVO C19 H32 SING N N 64 LVO C20 H33 SING N N 65 LVO C20 H34 SING N N 66 LVO C21 H35 SING N N 67 LVO C21 H36 SING N N 68 LVO C21 H37 SING N N 69 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LVO SMILES ACDLabs 12.01 "O=C(OCC(O)C(OC)C1OC(=CC(NC(=[N@H])N)C1NC(=O)C)C(=O)O)CCCCCCC" LVO InChI InChI 1.03 "InChI=1S/C21H36N4O8/c1-4-5-6-7-8-9-16(28)32-11-14(27)18(31-3)19-17(24-12(2)26)13(25-21(22)23)10-15(33-19)20(29)30/h10,13-14,17-19,27H,4-9,11H2,1-3H3,(H,24,26)(H,29,30)(H4,22,23,25)/t13-,14+,17+,18+,19+/m0/s1" LVO InChIKey InChI 1.03 UKTIJASCFRNWCB-RMIBSVFLSA-N LVO SMILES_CANONICAL CACTVS 3.370 "CCCCCCCC(=O)OC[C@@H](O)[C@@H](OC)[C@@H]1OC(=C[C@H](NC(N)=N)[C@H]1NC(C)=O)C(O)=O" LVO SMILES CACTVS 3.370 "CCCCCCCC(=O)OC[CH](O)[CH](OC)[CH]1OC(=C[CH](NC(N)=N)[CH]1NC(C)=O)C(O)=O" LVO SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "[H]/N=C(\N)/N[C@H]1C=C(O[C@H]([C@@H]1NC(=O)C)[C@@H]([C@@H](COC(=O)CCCCCCC)O)OC)C(=O)O" LVO SMILES "OpenEye OEToolkits" 1.7.2 "CCCCCCCC(=O)OCC(C(C1C(C(C=C(O1)C(=O)O)NC(=N)N)NC(=O)C)OC)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LVO "SYSTEMATIC NAME" ACDLabs 12.01 ;5-(acetylamino)-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-methyl-9-O-octanoyl-D-glycero-D-galacto-non-2-enonic acid ; LVO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 ;(2R,3R,4S)-3-acetamido-4-carbamimidamido-2-[(1R,2R)-1-methoxy-3-octanoyloxy-2-oxidanyl-propyl]-3,4-dihydro-2H-pyran-6-c arboxylic acid ; # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support LVO "CARBOHYDRATE ISOMER" D PDB ? LVO "CARBOHYDRATE RING" dihydropyran PDB ? LVO "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LVO "Create component" 2011-09-07 PDBJ LVO "Other modification" 2020-07-03 RCSB LVO "Modify name" 2020-07-17 RCSB LVO "Modify synonyms" 2020-07-17 RCSB LVO "Modify internal type" 2020-07-17 RCSB LVO "Modify linking type" 2020-07-17 RCSB LVO "Modify atom id" 2020-07-17 RCSB LVO "Modify component atom id" 2020-07-17 RCSB ##