data_LVX # _chem_comp.id LVX _chem_comp.name "(1~{R})-3,3-bis(fluoranyl)-~{N}-[(2~{R})-3-methoxy-1-oxidanylidene-1-[[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(1,3-thiazol-2-ylmethylamino)butan-2-yl]amino]propan-2-yl]cyclohexane-1-carboxamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H32 F2 N4 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-08 _chem_comp.pdbx_modified_date 2023-03-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 538.607 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LVX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8HHU _chem_comp.pdbx_subcomponent_list "LWF 7C9 01B LU3" _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LVX F01 F1 F 0 1 N N N -18.867 -39.394 -2.648 6.872 0.432 1.192 F01 LWF 1 LVX C02 C1 C 0 1 N N N -18.621 -40.178 -1.563 6.720 1.286 0.095 C02 LWF 2 LVX F03 F2 F 0 1 N N N -17.346 -39.903 -1.159 7.919 1.339 -0.624 F03 LWF 3 LVX C04 C2 C 0 1 N N N -19.594 -39.818 -0.415 5.606 0.760 -0.811 C04 LWF 4 LVX C05 C3 C 0 1 N N R -21.010 -40.407 -0.527 4.294 0.702 -0.025 C05 LWF 5 LVX C06 C4 C 0 1 N N N -21.715 -40.404 0.840 3.196 0.184 -0.918 C06 LWF 6 LVX O34 O1 O 0 1 N N N -21.082 -40.525 1.842 3.438 -0.110 -2.069 O34 LWF 7 LVX C35 C5 C 0 1 N N N -21.032 -41.844 -1.066 3.932 2.105 0.467 C35 LWF 8 LVX C36 C6 C 0 1 N N N -20.136 -42.063 -2.295 5.047 2.631 1.373 C36 LWF 9 LVX C37 C7 C 0 1 N N N -18.690 -41.634 -2.036 6.358 2.689 0.587 C37 LWF 10 LVX O10 O2 O 0 1 N N N -26.106 -39.277 2.273 -0.354 1.621 -1.219 O20 7C9 11 LVX N07 N1 N 0 1 N N N -23.166 -40.239 0.911 1.945 0.047 -0.436 N03 7C9 12 LVX C08 C8 C 0 1 N N R -23.895 -40.250 2.179 0.877 -0.457 -1.304 C04 7C9 13 LVX C12 C9 C 0 1 N N N -23.579 -39.041 3.072 -0.201 -1.087 -0.460 C05 7C9 14 LVX O33 O3 O 0 1 N N N -24.003 -38.977 4.178 -0.089 -1.112 0.748 O18 7C9 15 LVX C09 C10 C 0 1 N N N -25.395 -40.431 1.916 0.284 0.702 -2.108 C19 7C9 16 LVX C11 C11 C 0 1 N N N -26.916 -38.776 1.248 -0.944 2.747 -1.872 C21 7C9 17 LVX C14 C13 C 0 1 N N R -22.405 -36.835 3.440 -2.338 -2.234 -0.226 C1 01B 18 LVX C15 C20 C 0 1 N N S -20.907 -36.937 3.763 -3.667 -2.193 -0.983 C2 01B 19 LVX N13 N2 N 0 1 N N N -22.753 -37.957 2.585 -1.290 -1.622 -1.047 N2 01B 20 LVX O25 O4 O 0 1 N N N -20.152 -37.097 2.593 -3.576 -3.011 -2.151 O2 01B 21 LVX C16 C21 C 0 1 N N N -20.549 -38.029 4.769 -3.972 -0.773 -1.386 C3 01B 22 LVX C26 C14 C 0 1 N N N -22.627 -35.512 2.701 -1.967 -3.687 0.074 C6 01B 23 LVX C27 C15 C 0 1 Y N N -24.098 -35.186 2.467 -0.723 -3.723 0.924 C7 01B 24 LVX C32 C19 C 0 1 Y N N -24.704 -35.538 1.271 0.522 -3.765 0.326 C8 01B 25 LVX C31 C12 C 0 1 Y N N -26.036 -35.228 1.054 1.663 -3.798 1.106 C9 01B 26 LVX C30 C18 C 0 1 Y N N -26.758 -34.572 2.040 1.559 -3.788 2.484 C10 01B 27 LVX C29 C17 C 0 1 Y N N -26.149 -34.215 3.236 0.313 -3.745 3.083 C11 01B 28 LVX C28 C16 C 0 1 Y N N -24.815 -34.522 3.450 -0.827 -3.707 2.303 C12 01B 29 LVX O24 O5 O 0 1 N N N -20.997 -37.988 5.856 -4.009 -0.471 -2.560 O3 01B 30 LVX C19 C22 C 0 1 Y N N -19.989 -41.124 5.988 -4.718 2.377 0.400 C17 LU3 31 LVX C22 C23 C 0 1 Y N N -21.834 -42.565 6.726 -5.462 3.647 2.373 C20 LU3 32 LVX C18 C24 C 0 1 N N N -19.092 -40.107 5.294 -4.500 1.541 -0.834 C16 LU3 33 LVX C21 C25 C 0 1 Y N N -20.645 -42.862 7.446 -4.156 3.704 2.096 C19 LU3 34 LVX N17 N3 N 0 1 N N N -19.627 -39.089 4.403 -4.204 0.160 -0.442 N15 LU3 35 LVX N20 N4 N 0 1 Y N N -19.553 -41.989 6.990 -3.793 3.017 1.032 N18 LU3 36 LVX S23 S1 S 0 1 Y N N -21.545 -41.393 5.660 -6.229 2.623 1.162 S21 LU3 37 LVX H1 H1 H 0 1 N N N -19.153 -40.177 0.526 5.487 1.426 -1.666 H7 LWF 38 LVX H2 H2 H 0 1 N N N -19.686 -38.722 -0.382 5.864 -0.239 -1.162 H8 LWF 39 LVX H3 H3 H 0 1 N N N -21.591 -39.774 -1.214 4.412 0.036 0.830 H9 LWF 40 LVX H4 H4 H 0 1 N N N -22.067 -42.094 -1.343 3.814 2.770 -0.388 H27 LWF 41 LVX H5 H5 H 0 1 N N N -20.693 -42.519 -0.266 2.998 2.063 1.027 H28 LWF 42 LVX H6 H6 H 0 1 N N N -20.536 -41.475 -3.135 4.789 3.630 1.724 H29 LWF 43 LVX H7 H7 H 0 1 N N N -20.148 -43.131 -2.557 5.165 1.965 2.228 H30 LWF 44 LVX H8 H8 H 0 1 N N N -18.256 -42.284 -1.262 7.153 3.064 1.233 H31 LWF 45 LVX H9 H9 H 0 1 N N N -18.113 -41.737 -2.967 6.240 3.355 -0.268 H32 LWF 46 LVX H10 H10 H 0 1 N N N -23.679 -40.114 0.062 1.751 0.282 0.485 H5 7C9 47 LVX H11 H11 H 0 1 N N N -23.567 -41.141 2.735 1.285 -1.202 -1.987 H6 7C9 48 LVX H12 H12 H 0 1 N N N -25.552 -40.635 0.846 -0.448 0.315 -2.817 H13 7C9 49 LVX H13 H13 H 0 1 N N N -25.765 -41.280 2.509 1.079 1.213 -2.650 H14 7C9 50 LVX H14 H14 H 0 1 N N N -27.440 -37.875 1.601 -1.407 3.396 -1.129 H15 7C9 51 LVX H15 H15 H 0 1 N N N -26.292 -38.520 0.379 -0.174 3.300 -2.409 H16 7C9 52 LVX H16 H16 H 0 1 N N N -27.654 -39.539 0.958 -1.702 2.402 -2.576 H17 7C9 53 LVX H18 H18 H 0 1 N N N -22.991 -36.849 4.371 -2.435 -1.683 0.709 H1 01B 54 LVX H25 H25 H 0 1 N N N -20.622 -35.980 4.225 -4.463 -2.567 -0.339 H2 01B 55 LVX H26 H26 H 0 1 N N N -22.416 -37.981 1.644 -1.380 -1.601 -2.012 HN2A 01B 56 LVX H27 H27 H 0 1 N N N -19.231 -37.158 2.816 -2.886 -2.736 -2.771 HO2 01B 57 LVX H19 H19 H 0 1 N N N -22.123 -35.570 1.725 -2.786 -4.169 0.608 H6 01B 58 LVX H20 H20 H 0 1 N N N -22.181 -34.702 3.296 -1.783 -4.216 -0.861 H6A 01B 59 LVX H24 H24 H 0 1 N N N -24.138 -36.053 0.509 0.604 -3.773 -0.751 H8 01B 60 LVX H17 H17 H 0 1 N N N -26.510 -35.496 0.121 2.636 -3.832 0.638 H9 01B 61 LVX H23 H23 H 0 1 N N N -27.800 -34.338 1.877 2.450 -3.815 3.094 H10 01B 62 LVX H22 H22 H 0 1 N N N -26.714 -33.699 3.998 0.231 -3.738 4.160 H11 01B 63 LVX H21 H21 H 0 1 N N N -24.336 -34.245 4.378 -1.800 -3.670 2.770 H12 01B 64 LVX H28 H28 H 0 1 N N N -22.787 -43.052 6.872 -5.958 4.137 3.197 H2 LU3 65 LVX H29 H29 H 0 1 N N N -18.370 -40.687 4.700 -5.400 1.558 -1.449 H14 LU3 66 LVX H30 H30 H 0 1 N N N -18.561 -39.569 6.093 -3.663 1.944 -1.404 H15 LU3 67 LVX H31 H31 H 0 1 N N N -20.557 -43.616 8.214 -3.455 4.266 2.696 H16 LU3 68 LVX H32 H32 H 0 1 N N N -19.332 -39.123 3.448 -4.174 -0.082 0.497 H20 LU3 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LVX F01 C02 SING N N 1 LVX C36 C37 SING N N 2 LVX C36 C35 SING N N 3 LVX C37 C02 SING N N 4 LVX C02 F03 SING N N 5 LVX C02 C04 SING N N 6 LVX C35 C05 SING N N 7 LVX C05 C04 SING N N 8 LVX C05 C06 SING N N 9 LVX C06 N07 SING N N 10 LVX C06 O34 DOUB N N 11 LVX N07 C08 SING N N 12 LVX C31 C32 DOUB Y N 13 LVX C31 C30 SING Y N 14 LVX C11 O10 SING N N 15 LVX C32 C27 SING Y N 16 LVX C09 C08 SING N N 17 LVX C09 O10 SING N N 18 LVX C30 C29 DOUB Y N 19 LVX C08 C12 SING N N 20 LVX C27 C26 SING N N 21 LVX C27 C28 DOUB Y N 22 LVX N13 C12 SING N N 23 LVX N13 C14 SING N N 24 LVX O25 C15 SING N N 25 LVX C26 C14 SING N N 26 LVX C12 O33 DOUB N N 27 LVX C29 C28 SING Y N 28 LVX C14 C15 SING N N 29 LVX C15 C16 SING N N 30 LVX N17 C16 SING N N 31 LVX N17 C18 SING N N 32 LVX C16 O24 DOUB N N 33 LVX C18 C19 SING N N 34 LVX S23 C19 SING Y N 35 LVX S23 C22 SING Y N 36 LVX C19 N20 DOUB Y N 37 LVX C22 C21 DOUB Y N 38 LVX N20 C21 SING Y N 39 LVX C04 H1 SING N N 40 LVX C04 H2 SING N N 41 LVX C05 H3 SING N N 42 LVX C35 H4 SING N N 43 LVX C35 H5 SING N N 44 LVX C36 H6 SING N N 45 LVX C36 H7 SING N N 46 LVX C37 H8 SING N N 47 LVX C37 H9 SING N N 48 LVX N07 H10 SING N N 49 LVX C08 H11 SING N N 50 LVX C09 H12 SING N N 51 LVX C09 H13 SING N N 52 LVX C11 H14 SING N N 53 LVX C11 H15 SING N N 54 LVX C11 H16 SING N N 55 LVX C31 H17 SING N N 56 LVX C14 H18 SING N N 57 LVX C26 H19 SING N N 58 LVX C26 H20 SING N N 59 LVX C28 H21 SING N N 60 LVX C29 H22 SING N N 61 LVX C30 H23 SING N N 62 LVX C32 H24 SING N N 63 LVX C15 H25 SING N N 64 LVX N13 H26 SING N N 65 LVX O25 H27 SING N N 66 LVX C22 H28 SING N N 67 LVX C18 H29 SING N N 68 LVX C18 H30 SING N N 69 LVX C21 H31 SING N N 70 LVX N17 H32 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LVX InChI InChI 1.06 "InChI=1S/C25H32F2N4O5S/c1-36-15-19(31-22(33)17-8-5-9-25(26,27)13-17)23(34)30-18(12-16-6-3-2-4-7-16)21(32)24(35)29-14-20-28-10-11-37-20/h2-4,6-7,10-11,17-19,21,32H,5,8-9,12-15H2,1H3,(H,29,35)(H,30,34)(H,31,33)/t17-,18-,19-,21+/m1/s1" LVX InChIKey InChI 1.06 PYEYIJGOSSTTFY-XCJLJZCSSA-N LVX SMILES_CANONICAL CACTVS 3.385 "COC[C@@H](NC(=O)[C@@H]1CCCC(F)(F)C1)C(=O)N[C@H](Cc2ccccc2)[C@H](O)C(=O)NCc3sccn3" LVX SMILES CACTVS 3.385 "COC[CH](NC(=O)[CH]1CCCC(F)(F)C1)C(=O)N[CH](Cc2ccccc2)[CH](O)C(=O)NCc3sccn3" LVX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC[C@H](C(=O)N[C@H](Cc1ccccc1)[C@@H](C(=O)NCc2nccs2)O)NC(=O)[C@@H]3CCCC(C3)(F)F" LVX SMILES "OpenEye OEToolkits" 2.0.7 "COCC(C(=O)NC(Cc1ccccc1)C(C(=O)NCc2nccs2)O)NC(=O)C3CCCC(C3)(F)F" # _pdbx_chem_comp_identifier.comp_id LVX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R})-3,3-bis(fluoranyl)-~{N}-[(2~{R})-3-methoxy-1-oxidanylidene-1-[[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(1,3-thiazol-2-ylmethylamino)butan-2-yl]amino]propan-2-yl]cyclohexane-1-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LVX "Create component" 2022-12-08 PDBJ LVX "Modify linking type" 2023-01-26 PDBJ LVX "Modify subcomponent list" 2023-01-26 PDBJ LVX "Modify formula" 2023-01-26 PDBJ LVX "Initial release" 2023-03-29 RCSB #