data_LXO # _chem_comp.id LXO _chem_comp.name "4-(pyridin-4-ylamino)butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H12 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-16 _chem_comp.pdbx_modified_date 2023-12-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 180.204 _chem_comp.one_letter_code ? _chem_comp.three_letter_code LXO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8HOU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LXO C24 C1 C 0 1 N N N Y N Y 22.462 19.789 6.902 -4.167 0.035 -0.001 C24 LXO 1 LXO C26 C2 C 0 1 N N N N N N 22.185 21.188 8.854 -1.719 -0.357 -0.001 C26 LXO 2 LXO C25 C3 C 0 1 N N N N N N 23.057 21.039 7.578 -2.818 0.707 -0.003 C25 LXO 3 LXO C27 C4 C 0 1 N N N N N N 22.484 22.419 9.804 -0.349 0.324 -0.004 C27 LXO 4 LXO C29 C5 C 0 1 Y N N N N N 24.130 23.042 11.639 2.042 -0.312 -0.003 C29 LXO 5 LXO C30 C6 C 0 1 Y N N N N N 25.195 22.651 12.456 2.401 1.036 -0.002 C30 LXO 6 LXO C31 C7 C 0 1 Y N N N N N 25.438 23.388 13.596 3.738 1.372 0.002 C31 LXO 7 LXO C33 C8 C 0 1 Y N N N N N 23.658 24.821 13.140 4.372 -0.847 0.002 C33 LXO 8 LXO C34 C9 C 0 1 Y N N N N N 23.341 24.146 11.982 3.059 -1.267 -0.001 C34 LXO 9 LXO N28 N1 N 0 1 N N N N N N 23.834 22.280 10.409 0.703 -0.694 -0.002 N28 LXO 10 LXO N32 N2 N 0 1 Y N N N N N 24.672 24.431 13.901 4.671 0.439 0.004 N32 LXO 11 LXO O35 O1 O 0 1 N N N Y N Y 22.954 18.737 7.042 -4.242 -1.171 0.003 O35 LXO 12 LXO H2 H2 H 0 1 N N N N N N 21.137 21.269 8.529 -1.815 -0.977 0.891 H2 LXO 13 LXO H3 H3 H 0 1 N N N N N N 22.314 20.273 9.450 -1.816 -0.982 -0.889 H3 LXO 14 LXO H4 H4 H 0 1 N N N N N N 24.115 20.884 7.837 -2.723 1.326 -0.895 H4 LXO 15 LXO H5 H5 H 0 1 N N N N N N 22.964 21.922 6.929 -2.722 1.331 0.885 H5 LXO 16 LXO H6 H6 H 0 1 N N N N N N 22.442 23.349 9.219 -0.254 0.944 -0.896 H6 LXO 17 LXO H7 H7 H 0 1 N N N N N N 21.729 22.454 10.603 -0.252 0.949 0.884 H7 LXO 18 LXO H8 H8 H 0 1 N N N N N N 25.808 21.799 12.202 1.643 1.804 -0.004 H8 LXO 19 LXO H9 H9 H 0 1 N N N N N N 26.257 23.116 14.246 4.026 2.414 0.003 H9 LXO 20 LXO H10 H10 H 0 1 N N N N N N 23.073 25.680 13.433 5.166 -1.579 0.004 H10 LXO 21 LXO H11 H11 H 0 1 N N N N N N 22.514 24.457 11.361 2.820 -2.320 -0.002 H11 LXO 22 LXO H12 H12 H 0 1 N N N N N N 23.965 21.312 10.621 0.468 -1.635 0.001 H12 LXO 23 LXO OXT OXT O 0 1 N Y N Y N Y 21.241 19.951 6.104 -5.286 0.776 0.003 O2 LXO 24 LXO H1 H1 H 0 1 N Y N Y N Y 20.970 19.106 5.765 -6.128 0.301 0.009 H1 LXO 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LXO C24 O35 DOUB N N 1 LXO C24 C25 SING N N 2 LXO C25 C26 SING N N 3 LXO C26 C27 SING N N 4 LXO C27 N28 SING N N 5 LXO N28 C29 SING N N 6 LXO C29 C34 DOUB Y N 7 LXO C29 C30 SING Y N 8 LXO C34 C33 SING Y N 9 LXO C30 C31 DOUB Y N 10 LXO C33 N32 DOUB Y N 11 LXO C31 N32 SING Y N 12 LXO C26 H2 SING N N 13 LXO C26 H3 SING N N 14 LXO C25 H4 SING N N 15 LXO C25 H5 SING N N 16 LXO C27 H6 SING N N 17 LXO C27 H7 SING N N 18 LXO C30 H8 SING N N 19 LXO C31 H9 SING N N 20 LXO C33 H10 SING N N 21 LXO C34 H11 SING N N 22 LXO N28 H12 SING N N 23 LXO C24 OXT SING N N 24 LXO OXT H1 SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LXO InChI InChI 1.06 "InChI=1S/C9H12N2O2/c12-9(13)2-1-5-11-8-3-6-10-7-4-8/h3-4,6-7H,1-2,5H2,(H,10,11)(H,12,13)" LXO InChIKey InChI 1.06 HPDCDJWQNLPXFS-UHFFFAOYSA-N LXO SMILES_CANONICAL CACTVS 3.385 "OC(=O)CCCNc1ccncc1" LXO SMILES CACTVS 3.385 "OC(=O)CCCNc1ccncc1" LXO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnccc1NCCCC(=O)O" LXO SMILES "OpenEye OEToolkits" 2.0.7 "c1cnccc1NCCCC(=O)O" # _pdbx_chem_comp_identifier.comp_id LXO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-(pyridin-4-ylamino)butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LXO "Create component" 2022-12-16 PDBJ LXO "Modify leaving atom flag" 2022-12-16 PDBJ LXO "Modify backbone" 2023-11-03 PDBE LXO "Initial release" 2023-12-13 RCSB #