data_LYN # _chem_comp.id LYN _chem_comp.name "2,6-DIAMINO-HEXANOIC ACID AMIDE" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H16 N3 O" _chem_comp.mon_nstd_parent_comp_id LYS _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2000-11-10 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 146.211 _chem_comp.one_letter_code K _chem_comp.three_letter_code LYN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1GEA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal LYN N N N 0 1 N N N 31.493 0.002 1.481 1.453 1.781 0.221 N LYN 1 LYN CA CA C 0 1 N N S 32.397 1.174 1.656 1.419 0.336 0.487 CA LYN 2 LYN CB CB C 0 1 N N N 31.633 2.308 2.342 0.206 -0.282 -0.211 CB LYN 3 LYN CG CG C 0 1 N N N 30.480 2.764 1.445 -1.078 0.274 0.409 CG LYN 4 LYN CD CD C 0 1 N N N 30.117 4.213 1.775 -2.290 -0.345 -0.289 CD LYN 5 LYN CE CE C 0 1 N N N 30.881 5.156 0.843 -3.574 0.211 0.331 CE LYN 6 LYN NZ NZ N 1 1 N N N 31.021 6.490 1.492 -4.739 -0.383 -0.339 NZ LYN 7 LYN C C C 0 1 N N N 33.595 0.769 2.518 2.680 -0.301 -0.038 C LYN 8 LYN O O O 0 1 N N N 34.193 1.593 3.181 3.343 0.270 -0.878 O LYN 9 LYN NT NT N 0 1 N N N 33.975 -0.479 2.535 3.070 -1.505 0.425 NT LYN 10 LYN H HN H 0 1 N N N 31.420 -0.668 2.191 1.520 1.890 -0.780 H LYN 11 LYN H2 HN2 H 0 1 N Y N 30.636 0.246 0.983 0.553 2.147 0.492 H2 LYN 12 LYN HA HA H 0 1 N N N 32.745 1.507 0.689 1.346 0.166 1.561 HA LYN 13 LYN HB2 HB1 H 0 1 N N N 32.301 3.138 2.516 0.233 -0.036 -1.273 HB2 LYN 14 LYN HB3 HB2 H 0 1 N N N 31.240 1.958 3.286 0.230 -1.365 -0.088 HB3 LYN 15 LYN HG2 HG1 H 0 1 N N N 29.621 2.132 1.614 -1.104 0.028 1.470 HG2 LYN 16 LYN HG3 HG2 H 0 1 N N N 30.781 2.693 0.410 -1.101 1.356 0.286 HG3 LYN 17 LYN HD2 HD1 H 0 1 N N N 30.384 4.428 2.798 -2.263 -0.099 -1.350 HD2 LYN 18 LYN HD3 HD2 H 0 1 N N N 29.054 4.357 1.641 -2.267 -1.428 -0.166 HD3 LYN 19 LYN HE2 HE1 H 0 1 N N N 30.340 5.262 -0.085 -3.601 -0.035 1.393 HE2 LYN 20 LYN HE3 HE2 H 0 1 N N N 31.861 4.748 0.644 -3.597 1.294 0.208 HE3 LYN 21 LYN HZ1 HZ1 H 0 1 N N N 31.453 7.158 0.823 -4.714 -0.156 -1.322 HZ1 LYN 22 LYN HZ2 HZ2 H 0 1 N N N 31.624 6.403 2.336 -4.717 -1.386 -0.225 HZ2 LYN 23 LYN HZ3 HZ3 H 0 1 N N N 30.083 6.841 1.770 -5.585 -0.017 0.070 HZ3 LYN 24 LYN HNT1 H1 H 0 0 N N N 33.494 -1.145 2.001 2.539 -1.961 1.096 HNT1 LYN 25 LYN HNT2 H2 H 0 0 N N N 34.741 -0.751 3.082 3.881 -1.915 0.087 HNT2 LYN 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal LYN N CA SING N N 1 LYN N H SING N N 2 LYN N H2 SING N N 3 LYN CA CB SING N N 4 LYN CA C SING N N 5 LYN CA HA SING N N 6 LYN CB CG SING N N 7 LYN CB HB2 SING N N 8 LYN CB HB3 SING N N 9 LYN CG CD SING N N 10 LYN CG HG2 SING N N 11 LYN CG HG3 SING N N 12 LYN CD CE SING N N 13 LYN CD HD2 SING N N 14 LYN CD HD3 SING N N 15 LYN CE NZ SING N N 16 LYN CE HE2 SING N N 17 LYN CE HE3 SING N N 18 LYN NZ HZ1 SING N N 19 LYN NZ HZ2 SING N N 20 LYN NZ HZ3 SING N N 21 LYN C O DOUB N N 22 LYN C NT SING N N 23 LYN NT HNT1 SING N N 24 LYN NT HNT2 SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor LYN SMILES ACDLabs 10.04 "O=C(N)C(N)CCCC[NH3+]" LYN SMILES_CANONICAL CACTVS 3.341 "N[C@@H](CCCC[NH3+])C(N)=O" LYN SMILES CACTVS 3.341 "N[CH](CCCC[NH3+])C(N)=O" LYN SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(CC[NH3+])C[C@@H](C(=O)N)N" LYN SMILES "OpenEye OEToolkits" 1.5.0 "C(CC[NH3+])CC(C(=O)N)N" LYN InChI InChI 1.03 "InChI=1S/C6H15N3O/c7-4-2-1-3-5(8)6(9)10/h5H,1-4,7-8H2,(H2,9,10)/p+1/t5-/m0/s1" LYN InChIKey InChI 1.03 HKXLAGBDJVHRQG-YFKPBYRVSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier LYN "SYSTEMATIC NAME" ACDLabs 10.04 6-ammonio-L-norleucinamide LYN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(5S)-5,6-diamino-6-oxo-hexyl]azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site LYN "Create component" 2000-11-10 RCSB LYN "Modify descriptor" 2011-06-04 RCSB #